RNA–Protein interactions for RNA: ENST00000522743.1

AP003351.1-201, humanhuman

TSL 3 BASIC

Gene AP003351.1, Length 668 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003351.1-201ENST00000522743 CDCA5Q96FF9 252 aa16.61■□□□□ 0.25
AP003351.1-201ENST00000522743 ANKRD2Q9GZV1 360 aa16.61■□□□□ 0.25
AP003351.1-201ENST00000522743 HDAC9Q9UKV0 1011 aa16.61■□□□□ 0.25
AP003351.1-201ENST00000522743 NEURL1BA8MQ27 555 aa16.6■□□□□ 0.25
AP003351.1-201ENST00000522743 DGKZQ13574 1117 aa16.6■□□□□ 0.25
AP003351.1-201ENST00000522743 UBE3BQ7Z3V4 1068 aa16.6■□□□□ 0.25
AP003351.1-201ENST00000522743 TSPYL6Q8N831 410 aa16.6■□□□□ 0.25
AP003351.1-201ENST00000522743 TTLL11Q8NHH1 800 aa16.6■□□□□ 0.25
AP003351.1-201ENST00000522743 COA1Q9GZY4 146 aa16.6■□□□□ 0.25
AP003351.1-201ENST00000522743 SPINK5Q9NQ38 1064 aaPredicted RBP16.6■□□□□ 0.25
AP003351.1-201ENST00000522743 LEMD3Q9Y2U8 911 aa16.6■□□□□ 0.25
AP003351.1-201ENST00000522743 SLC4A2P04920 1241 aa16.59■□□□□ 0.25
AP003351.1-201ENST00000522743 CCT4P50991 539 aaKnown RBP16.59■□□□□ 0.25
AP003351.1-201ENST00000522743 MLLT1Q03111 559 aaPredicted RBP16.59■□□□□ 0.25
AP003351.1-201ENST00000522743 FKBP5Q13451 457 aaPredicted RBP16.59■□□□□ 0.25
AP003351.1-201ENST00000522743 MCOLN1Q9GZU1 580 aa16.59■□□□□ 0.25
AP003351.1-201ENST00000522743 GREM2Q9H772 168 aa16.59■□□□□ 0.25
AP003351.1-201ENST00000522743 MINPP1Q9UNW1 487 aa16.59■□□□□ 0.25
AP003351.1-201ENST00000522743 VAMP4O75379 141 aa16.58■□□□□ 0.24
AP003351.1-201ENST00000522743 IGKV5-2P06315 115 aa16.58■□□□□ 0.24
AP003351.1-201ENST00000522743 SLC10A3P09131 477 aa16.58■□□□□ 0.24
AP003351.1-201ENST00000522743 EXOSC9Q06265 439 aaKnown RBP16.58■□□□□ 0.24
AP003351.1-201ENST00000522743 SLFN5Q08AF3 891 aa16.58■□□□□ 0.24
AP003351.1-201ENST00000522743 FLIIQ13045 1269 aa16.58■□□□□ 0.24
AP003351.1-201ENST00000522743 TTLL12Q14166 644 aaPredicted RBP16.58■□□□□ 0.24
AP003351.1-201ENST00000522743 CWF19L2Q2TBE0 894 aaKnown RBP16.58■□□□□ 0.24
AP003351.1-201ENST00000522743 FAM161AQ3B820 660 aa16.58■□□□□ 0.24
AP003351.1-201ENST00000522743 STRIP1Q5VSL9 837 aa16.58■□□□□ 0.24
AP003351.1-201ENST00000522743 KIF23Q02241 960 aaPredicted RBP16.57■□□□□ 0.24
AP003351.1-201ENST00000522743 PLA2G12BQ9BX93 195 aa16.57■□□□□ 0.24
AP003351.1-201ENST00000522743 FAM155AB1AL88 458 aaPredicted RBP16.56■□□□□ 0.24
AP003351.1-201ENST00000522743 ITGA6P23229 1130 aa16.56■□□□□ 0.24
AP003351.1-201ENST00000522743 GCKRQ14397 625 aa16.56■□□□□ 0.24
AP003351.1-201ENST00000522743 DNAAF4Q8WXU2 420 aa16.56■□□□□ 0.24
AP003351.1-201ENST00000522743 GMLQ99445 158 aa16.56■□□□□ 0.24
AP003351.1-201ENST00000522743 SCN9AQ15858 1988 aa16.56■□□□□ 0.24
AP003351.1-201ENST00000522743 MYH3P11055 1940 aa16.56■□□□□ 0.24
AP003351.1-201ENST00000522743 PAPPA2Q9BXP8 1791 aa16.56■□□□□ 0.24
AP003351.1-201ENST00000522743 COL4A1P02462 1669 aa16.56■□□□□ 0.24
AP003351.1-201ENST00000522743 ZNF804BA4D1E1 1349 aa16.55■□□□□ 0.24
AP003351.1-201ENST00000522743 ANKRD18BA2A2Z9 1011 aa16.55■□□□□ 0.24
AP003351.1-201ENST00000522743 H7C1W4 665 aa16.55■□□□□ 0.24
AP003351.1-201ENST00000522743 APOBEC3FQ8IUX4 373 aaKnown RBP16.55■□□□□ 0.24
AP003351.1-201ENST00000522743 TRMT2AQ8IZ69 625 aaKnown RBP16.55■□□□□ 0.24
AP003351.1-201ENST00000522743 LINS1Q8NG48 757 aa16.55■□□□□ 0.24
AP003351.1-201ENST00000522743 TRPA1O75762 1119 aa16.54■□□□□ 0.24
AP003351.1-201ENST00000522743 TTLL5Q6EMB2 1281 aa16.54■□□□□ 0.24
AP003351.1-201ENST00000522743 DLK2Q6UY11 383 aa16.54■□□□□ 0.24
AP003351.1-201ENST00000522743 RNF186Q9NXI6 227 aa16.54■□□□□ 0.24
AP003351.1-201ENST00000522743 CHMP3Q9Y3E7 222 aa16.54■□□□□ 0.24
AP003351.1-201ENST00000522743 PSME4Q14997 1843 aa16.54■□□□□ 0.24
AP003351.1-201ENST00000522743 ASTN2O75129 1339 aaPredicted RBP16.53■□□□□ 0.24
AP003351.1-201ENST00000522743 IFIT5Q13325 482 aaKnown RBP16.53■□□□□ 0.24
AP003351.1-201ENST00000522743 TAF7LQ5H9L4 462 aa16.53■□□□□ 0.24
AP003351.1-201ENST00000522743 DACT2Q5SW24 774 aa16.53■□□□□ 0.24
AP003351.1-201ENST00000522743 ARMC9Q7Z3E5 817 aa16.53■□□□□ 0.24
AP003351.1-201ENST00000522743 RASAL3Q86YV0 1011 aa16.53■□□□□ 0.24
AP003351.1-201ENST00000522743 ZIC5Q96T25 663 aa16.53■□□□□ 0.24
AP003351.1-201ENST00000522743 POLR2AP24928 1970 aaKnown RBP16.53■□□□□ 0.24
AP003351.1-201ENST00000522743 CASP8AP2Q9UKL3 1982 aa16.52■□□□□ 0.24
AP003351.1-201ENST00000522743 MYO1BO43795 1136 aa16.52■□□□□ 0.24
AP003351.1-201ENST00000522743 HNRNPUQ00839 825 aaKnown RBP eCLIP16.52■□□□□ 0.24
AP003351.1-201ENST00000522743 SREBF2Q12772 1141 aa16.52■□□□□ 0.24
AP003351.1-201ENST00000522743 WNT10BO00744 389 aa16.51■□□□□ 0.23
AP003351.1-201ENST00000522743 RGS19P49795 217 aa16.51■□□□□ 0.23
AP003351.1-201ENST00000522743 G2E3Q7L622 706 aa16.51■□□□□ 0.23
AP003351.1-201ENST00000522743 ZNF804AQ7Z570 1209 aa16.51■□□□□ 0.23
AP003351.1-201ENST00000522743 CDCA7LQ96GN5 454 aa16.51■□□□□ 0.23
AP003351.1-201ENST00000522743 CSRNP1Q96S65 589 aa16.51■□□□□ 0.23
AP003351.1-201ENST00000522743 AKAP11Q9UKA4 1901 aa16.51■□□□□ 0.23
AP003351.1-201ENST00000522743 CT47B1P0C2W7 299 aaPredicted RBP16.5■□□□□ 0.23
AP003351.1-201ENST00000522743 GTF2IP78347 998 aa16.5■□□□□ 0.23
AP003351.1-201ENST00000522743 CHRNDQ07001 517 aa16.5■□□□□ 0.23
AP003351.1-201ENST00000522743 NBPF9Q3BBW0 867 aa16.5■□□□□ 0.23
AP003351.1-201ENST00000522743 CTU1Q7Z7A3 348 aaKnown RBP16.5■□□□□ 0.23
AP003351.1-201ENST00000522743 SPEF2Q9C093 1822 aa16.49■□□□□ 0.23
AP003351.1-201ENST00000522743 COL1A1P02452 1464 aaPredicted RBP16.49■□□□□ 0.23
AP003351.1-201ENST00000522743 CSF1RP07333 972 aa16.49■□□□□ 0.23
AP003351.1-201ENST00000522743 DLGAP5Q15398 846 aa16.49■□□□□ 0.23
AP003351.1-201ENST00000522743 PKN2Q16513 984 aaKnown RBP16.49■□□□□ 0.23
AP003351.1-201ENST00000522743 CCDC57Q2TAC2 916 aa16.49■□□□□ 0.23
AP003351.1-201ENST00000522743 KIAA0825Q8IV33 1275 aa16.49■□□□□ 0.23
AP003351.1-201ENST00000522743 CACNA1FO60840 1977 aa16.49■□□□□ 0.23
AP003351.1-201ENST00000522743 SASH1O94885 1247 aa16.48■□□□□ 0.23
AP003351.1-201ENST00000522743 C9orf78Q9NZ63 289 aaPredicted RBP16.48■□□□□ 0.23
AP003351.1-201ENST00000522743 PPP2R3BQ9Y5P8 575 aa16.48■□□□□ 0.23
AP003351.1-201ENST00000522743 UBE2Q2LH0YL09 131 aa16.47■□□□□ 0.23
AP003351.1-201ENST00000522743 PPP1R12BO60237 982 aaPredicted RBP16.47■□□□□ 0.23
AP003351.1-201ENST00000522743 MXD3Q9BW11 206 aa16.47■□□□□ 0.23
AP003351.1-201ENST00000522743 CD209Q9NNX6 404 aa16.47■□□□□ 0.23
AP003351.1-201ENST00000522743 ALDH1A1P00352 501 aa16.46■□□□□ 0.23
AP003351.1-201ENST00000522743 CASP7P55210 303 aa16.46■□□□□ 0.23
AP003351.1-201ENST00000522743 C15orf52Q6ZUT6 534 aaKnown RBP16.46■□□□□ 0.23
AP003351.1-201ENST00000522743 CNNM1Q9NRU3 951 aa16.46■□□□□ 0.23
AP003351.1-201ENST00000522743 GRM8O00222 908 aa16.45■□□□□ 0.22
AP003351.1-201ENST00000522743 FKBP1AP62942 108 aaKnown RBP16.45■□□□□ 0.22
AP003351.1-201ENST00000522743 ALDH1L2Q3SY69 923 aa16.45■□□□□ 0.22
AP003351.1-201ENST00000522743 SUPT20HL1Q3ZLR7 823 aa16.45■□□□□ 0.22
AP003351.1-201ENST00000522743 PRAMEF18Q5VWM3 479 aa16.45■□□□□ 0.22
AP003351.1-201ENST00000522743 LDHAL6AQ6ZMR3 332 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms