RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 COL4A1P02462 1669 aa11.67□□□□□ -0.54
SHPRH-209ENST00000521977 ERC2O15083 957 aa11.66□□□□□ -0.54
SHPRH-209ENST00000521977 GLRX3O76003 335 aaKnown RBP11.66□□□□□ -0.54
SHPRH-209ENST00000521977 GPATCH3Q96I76 525 aa11.66□□□□□ -0.54
SHPRH-209ENST00000521977 CDC5LQ99459 802 aaKnown RBP11.66□□□□□ -0.54
SHPRH-209ENST00000521977 BCL11AQ9H165 835 aa11.66□□□□□ -0.54
SHPRH-209ENST00000521977 DBNLQ9UJU6 430 aaKnown RBP11.66□□□□□ -0.54
SHPRH-209ENST00000521977 MROH5Q6ZUA9 1318 aa11.65□□□□□ -0.54
SHPRH-209ENST00000521977 KLRG2A4D1S0 409 aaPredicted RBP11.65□□□□□ -0.54
SHPRH-209ENST00000521977 SNPHO15079 494 aa11.65□□□□□ -0.54
SHPRH-209ENST00000521977 IGHMBP2P38935 993 aaKnown RBP11.65□□□□□ -0.54
SHPRH-209ENST00000521977 CRY2Q49AN0 593 aa11.65□□□□□ -0.54
SHPRH-209ENST00000521977 METTL24Q5JXM2 366 aa11.65□□□□□ -0.54
SHPRH-209ENST00000521977 CNNM1Q9NRU3 951 aa11.65□□□□□ -0.54
SHPRH-209ENST00000521977 AKAP2Q9Y2D5 859 aa11.65□□□□□ -0.54
SHPRH-209ENST00000521977 RBM19Q9Y4C8 960 aaKnown RBP11.65□□□□□ -0.54
SHPRH-209ENST00000521977 A0A1B0GUL7 405 aa11.64□□□□□ -0.55
SHPRH-209ENST00000521977 CDC45O75419 566 aa11.64□□□□□ -0.55
SHPRH-209ENST00000521977 PDE8BO95263 885 aa11.64□□□□□ -0.55
SHPRH-209ENST00000521977 ATP5JP18859 108 aa11.64□□□□□ -0.55
SHPRH-209ENST00000521977 FGFR2P21802 821 aa11.64□□□□□ -0.55
SHPRH-209ENST00000521977 TIMM10P62072 90 aa11.64□□□□□ -0.55
SHPRH-209ENST00000521977 ST5P78524 1137 aa11.64□□□□□ -0.55
SHPRH-209ENST00000521977 TBC1D9Q6ZT07 1266 aa11.64□□□□□ -0.55
SHPRH-209ENST00000521977 ANKRD18AQ8IVF6 992 aa11.64□□□□□ -0.55
SHPRH-209ENST00000521977 CCDC24Q8N4L8 307 aa11.64□□□□□ -0.55
SHPRH-209ENST00000521977 MPHOSPH8Q99549 860 aa11.64□□□□□ -0.55
SHPRH-209ENST00000521977 DBNDD2Q9BQY9 259 aa11.64□□□□□ -0.55
SHPRH-209ENST00000521977 BSDC1Q9NW68 430 aaPredicted RBP11.64□□□□□ -0.55
SHPRH-209ENST00000521977 SPEF2Q9C093 1822 aa11.64□□□□□ -0.55
SHPRH-209ENST00000521977 A0A1B0GUL6 1792 aa11.64□□□□□ -0.55
SHPRH-209ENST00000521977 ARAP2Q8WZ64 1704 aa11.63□□□□□ -0.55
SHPRH-209ENST00000521977 RIOK3O14730 519 aaKnown RBP11.63□□□□□ -0.55
SHPRH-209ENST00000521977 CELF1Q92879 486 aaKnown RBP11.63□□□□□ -0.55
SHPRH-209ENST00000521977 TAF1P21675 1872 aa11.63□□□□□ -0.55
SHPRH-209ENST00000521977 ANKRD31Q8N7Z5 1873 aa11.62□□□□□ -0.55
SHPRH-209ENST00000521977 NPHP1O15259 732 aa11.62□□□□□ -0.55
SHPRH-209ENST00000521977 MMP10P09238 476 aa11.62□□□□□ -0.55
SHPRH-209ENST00000521977 ATP2B3Q16720 1220 aa11.62□□□□□ -0.55
SHPRH-209ENST00000521977 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.62□□□□□ -0.55
SHPRH-209ENST00000521977 TRIM6-TRIM34B2RNG4 842 aa11.61□□□□□ -0.55
SHPRH-209ENST00000521977 HOXA10P31260 410 aaPredicted RBP11.61□□□□□ -0.55
SHPRH-209ENST00000521977 RPS8P62241 208 aaKnown RBP11.61□□□□□ -0.55
SHPRH-209ENST00000521977 CHRNDQ07001 517 aa11.61□□□□□ -0.55
SHPRH-209ENST00000521977 GRAPQ13588 217 aa11.61□□□□□ -0.55
SHPRH-209ENST00000521977 PUM3Q15397 648 aaKnown RBP11.61□□□□□ -0.55
SHPRH-209ENST00000521977 DDX46Q7L014 1031 aaKnown RBP11.61□□□□□ -0.55
SHPRH-209ENST00000521977 CNTROBQ8N137 903 aa11.61□□□□□ -0.55
SHPRH-209ENST00000521977 GRAPLQ8TC17 118 aaPredicted RBP11.61□□□□□ -0.55
SHPRH-209ENST00000521977 LPIN2Q92539 896 aa11.61□□□□□ -0.55
SHPRH-209ENST00000521977 RILPL2Q969X0 211 aa11.61□□□□□ -0.55
SHPRH-209ENST00000521977 XAGE2Q96GT9 111 aa11.61□□□□□ -0.55
SHPRH-209ENST00000521977 NEUROD6Q96NK8 337 aa11.61□□□□□ -0.55
SHPRH-209ENST00000521977 BRIP1Q9BX63 1249 aa11.61□□□□□ -0.55
SHPRH-209ENST00000521977 MINPP1Q9UNW1 487 aa11.61□□□□□ -0.55
SHPRH-209ENST00000521977 PARP3Q9Y6F1 533 aa11.61□□□□□ -0.55
SHPRH-209ENST00000521977 AK9Q5TCS8 1911 aa11.6□□□□□ -0.55
SHPRH-209ENST00000521977 CHMLP26374 656 aa11.6□□□□□ -0.55
SHPRH-209ENST00000521977 ADORA1P30542 326 aa11.6□□□□□ -0.55
SHPRH-209ENST00000521977 SLC16A10Q8TF71 515 aa11.6□□□□□ -0.55
SHPRH-209ENST00000521977 UPF1Q92900 1129 aaKnown RBP eCLIP11.6□□□□□ -0.55
SHPRH-209ENST00000521977 EVI5LQ96CN4 794 aa11.6□□□□□ -0.55
SHPRH-209ENST00000521977 ZNF512BQ96KM6 892 aaPredicted RBP11.6□□□□□ -0.55
SHPRH-209ENST00000521977 HAUS7Q99871 368 aa11.6□□□□□ -0.55
SHPRH-209ENST00000521977 BOLA2Q9H3K6 86 aa11.6□□□□□ -0.55
SHPRH-209ENST00000521977 ST18O60284 1047 aa11.59□□□□□ -0.55
SHPRH-209ENST00000521977 EIF5BO60841 1220 aaKnown RBP11.59□□□□□ -0.55
SHPRH-209ENST00000521977 MAP4K4O95819 1239 aaPredicted RBP11.59□□□□□ -0.55
SHPRH-209ENST00000521977 MSL1Q68DK7 614 aa11.59□□□□□ -0.55
SHPRH-209ENST00000521977 TICAM2Q86XR7 235 aa11.59□□□□□ -0.55
SHPRH-209ENST00000521977 HELBQ8NG08 1087 aaPredicted RBP11.59□□□□□ -0.55
SHPRH-209ENST00000521977 RBM17Q96I25 401 aaKnown RBP11.59□□□□□ -0.55
SHPRH-209ENST00000521977 CRAMP1Q96RY5 1269 aa11.59□□□□□ -0.55
SHPRH-209ENST00000521977 TMEM121BQ9BXQ6 578 aaPredicted RBP11.59□□□□□ -0.55
SHPRH-209ENST00000521977 RFX7Q2KHR2 1363 aa11.58□□□□□ -0.56
SHPRH-209ENST00000521977 TAF5LO75529 589 aa11.58□□□□□ -0.56
SHPRH-209ENST00000521977 SLC5A1P13866 664 aa11.58□□□□□ -0.56
SHPRH-209ENST00000521977 ARID4AP29374 1257 aaPredicted RBP11.58□□□□□ -0.56
SHPRH-209ENST00000521977 UBE4AQ14139 1066 aa11.58□□□□□ -0.56
SHPRH-209ENST00000521977 CCDC158Q5M9N0 1113 aa11.58□□□□□ -0.56
SHPRH-209ENST00000521977 CASC1Q6TDU7 716 aa11.58□□□□□ -0.56
SHPRH-209ENST00000521977 RPGRQ92834 1020 aaKnown RBP11.58□□□□□ -0.56
SHPRH-209ENST00000521977 RNF25Q96BH1 459 aaPredicted RBP11.58□□□□□ -0.56
SHPRH-209ENST00000521977 PDGFDQ9GZP0 370 aaPredicted RBP11.58□□□□□ -0.56
SHPRH-209ENST00000521977 PLSCR2Q9NRY7 297 aa11.58□□□□□ -0.56
SHPRH-209ENST00000521977 LRRC37AA6NMS7 1700 aa11.57□□□□□ -0.56
SHPRH-209ENST00000521977 AKAP11Q9UKA4 1901 aa11.57□□□□□ -0.56
SHPRH-209ENST00000521977 SNAP23O00161 211 aa11.57□□□□□ -0.56
SHPRH-209ENST00000521977 IFIT1P09914 478 aaKnown RBP11.57□□□□□ -0.56
SHPRH-209ENST00000521977 SRGNP10124 158 aa11.57□□□□□ -0.56
SHPRH-209ENST00000521977 PDE6BP35913 854 aa11.57□□□□□ -0.56
SHPRH-209ENST00000521977 MFAP1P55081 439 aaKnown RBP11.57□□□□□ -0.56
SHPRH-209ENST00000521977 TTC39AQ5SRH9 613 aa11.57□□□□□ -0.56
SHPRH-209ENST00000521977 TBC1D32Q96NH3 1257 aa11.57□□□□□ -0.56
SHPRH-209ENST00000521977 ESYT1Q9BSJ8 1104 aa11.57□□□□□ -0.56
SHPRH-209ENST00000521977 ANKRD2Q9GZV1 360 aa11.57□□□□□ -0.56
SHPRH-209ENST00000521977 TAOK2Q9UL54 1235 aa11.57□□□□□ -0.56
SHPRH-209ENST00000521977 COL11A2P13942 1736 aaPredicted RBP11.57□□□□□ -0.56
SHPRH-209ENST00000521977 HIP1O00291 1037 aa11.56□□□□□ -0.56
SHPRH-209ENST00000521977 BBOX1O75936 387 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms