RNA–Protein interactions for RNA: ENST00000521835.1

DENND3-217, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best)

Gene DENND3, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-217ENST00000521835 USP28Q96RU2 1077 aa14.29□□□□□ -0.12
DENND3-217ENST00000521835 METTL24Q5JXM2 366 aa14.28□□□□□ -0.12
DENND3-217ENST00000521835 DHX32Q7L7V1 743 aaKnown RBP14.28□□□□□ -0.12
DENND3-217ENST00000521835 MAP7D2Q96T17 732 aa14.28□□□□□ -0.12
DENND3-217ENST00000521835 TMEM51Q9NW97 253 aa14.28□□□□□ -0.12
DENND3-217ENST00000521835 CPLX1O14810 134 aa14.28□□□□□ -0.12
DENND3-217ENST00000521835 CCDC158Q5M9N0 1113 aa14.28□□□□□ -0.12
DENND3-217ENST00000521835 CADPS2Q86UW7 1296 aa14.28□□□□□ -0.12
DENND3-217ENST00000521835 CNNM1Q9NRU3 951 aa14.28□□□□□ -0.12
DENND3-217ENST00000521835 TMOD3Q9NYL9 352 aa14.28□□□□□ -0.12
DENND3-217ENST00000521835 GOLGA8BA8MQT2 603 aa14.28□□□□□ -0.12
DENND3-217ENST00000521835 BECN2A8MW95 431 aa14.28□□□□□ -0.12
DENND3-217ENST00000521835 GOLGA6L19H0YKK7 550 aa14.28□□□□□ -0.12
DENND3-217ENST00000521835 UVSSAQ2YD98 709 aa14.28□□□□□ -0.12
DENND3-217ENST00000521835 CCDC73Q6ZRK6 1079 aa14.28□□□□□ -0.12
DENND3-217ENST00000521835 CCDC82Q8N4S0 544 aa14.28□□□□□ -0.12
DENND3-217ENST00000521835 KCNF1Q9H3M0 494 aa14.28□□□□□ -0.12
DENND3-217ENST00000521835 PRDM10Q9NQV6 1147 aa14.28□□□□□ -0.12
DENND3-217ENST00000521835 IL15P40933 162 aaPredicted RBP14.27□□□□□ -0.12
DENND3-217ENST00000521835 FSIP1Q8NA03 581 aa14.27□□□□□ -0.12
DENND3-217ENST00000521835 NSUN7Q8NE18 718 aaKnown RBP14.27□□□□□ -0.12
DENND3-217ENST00000521835 KCNB2Q92953 911 aa14.27□□□□□ -0.12
DENND3-217ENST00000521835 XAGE2Q96GT9 111 aa14.27□□□□□ -0.12
DENND3-217ENST00000521835 FUCA2Q9BTY2 467 aa14.27□□□□□ -0.12
DENND3-217ENST00000521835 TBC1D2BQ9UPU7 963 aa14.27□□□□□ -0.12
DENND3-217ENST00000521835 KLF18A0A0U1RQI7 1052 aa14.27□□□□□ -0.13
DENND3-217ENST00000521835 A0A1B0GVL5 298 aa14.27□□□□□ -0.13
DENND3-217ENST00000521835 RESTQ13127 1097 aa14.27□□□□□ -0.13
DENND3-217ENST00000521835 RABL6Q3YEC7 729 aaPredicted RBP14.27□□□□□ -0.13
DENND3-217ENST00000521835 RALYLQ86SE5 291 aaKnown RBP14.27□□□□□ -0.13
DENND3-217ENST00000521835 SDF4Q9BRK5 362 aa14.27□□□□□ -0.13
DENND3-217ENST00000521835 LMO7Q8WWI1 1683 aa14.27□□□□□ -0.13
DENND3-217ENST00000521835 LDHAL6AQ6ZMR3 332 aa14.26□□□□□ -0.13
DENND3-217ENST00000521835 RNF113AO15541 343 aaKnown RBP14.26□□□□□ -0.13
DENND3-217ENST00000521835 KINO60870 393 aaKnown RBP14.26□□□□□ -0.13
DENND3-217ENST00000521835 CASP7P55210 303 aa14.26□□□□□ -0.13
DENND3-217ENST00000521835 ARID5BQ14865 1188 aa14.26□□□□□ -0.13
DENND3-217ENST00000521835 ZRSR1Q15695 479 aaKnown RBP14.26□□□□□ -0.13
DENND3-217ENST00000521835 PIBF1Q8WXW3 757 aa14.26□□□□□ -0.13
DENND3-217ENST00000521835 MYL10Q9BUA6 226 aa14.26□□□□□ -0.13
DENND3-217ENST00000521835 INCENPQ9NQS7 918 aa14.26□□□□□ -0.13
DENND3-217ENST00000521835 IQSEC3Q9UPP2 1182 aaPredicted RBP14.26□□□□□ -0.13
DENND3-217ENST00000521835 CTDNEP1O95476 244 aa14.26□□□□□ -0.13
DENND3-217ENST00000521835 MCM5P33992 734 aa14.26□□□□□ -0.13
DENND3-217ENST00000521835 IFIT5Q13325 482 aaKnown RBP14.26□□□□□ -0.13
DENND3-217ENST00000521835 GNL2Q13823 731 aaKnown RBP14.26□□□□□ -0.13
DENND3-217ENST00000521835 KIF6Q6ZMV9 814 aa14.26□□□□□ -0.13
DENND3-217ENST00000521835 C11orf57Q6ZUT1 292 aaPredicted RBP14.26□□□□□ -0.13
DENND3-217ENST00000521835 AIFM3Q96NN9 605 aa14.26□□□□□ -0.13
DENND3-217ENST00000521835 PUS7LQ9H0K6 701 aaKnown RBP14.26□□□□□ -0.13
DENND3-217ENST00000521835 GOLGA6L6A8MZA4 724 aa14.25□□□□□ -0.13
DENND3-217ENST00000521835 H7C1W4 665 aa14.25□□□□□ -0.13
DENND3-217ENST00000521835 IL2RBP14784 551 aa14.25□□□□□ -0.13
DENND3-217ENST00000521835 RRP12Q5JTH9 1297 aaKnown RBP14.25□□□□□ -0.13
DENND3-217ENST00000521835 CHMP4CQ96CF2 233 aa14.25□□□□□ -0.13
DENND3-217ENST00000521835 GOLPH3LQ9H4A5 285 aa14.25□□□□□ -0.13
DENND3-217ENST00000521835 PPP4R3BQ5MIZ7 849 aa14.25□□□□□ -0.13
DENND3-217ENST00000521835 CLSTN2Q9H4D0 955 aa14.25□□□□□ -0.13
DENND3-217ENST00000521835 DDX19AQ9NUU7 478 aaKnown RBP14.25□□□□□ -0.13
DENND3-217ENST00000521835 PCDH11XQ9BZA7 1347 aa14.25□□□□□ -0.13
DENND3-217ENST00000521835 PCDH11YQ9BZA8 1340 aa14.25□□□□□ -0.13
DENND3-217ENST00000521835 C5P01031 1676 aa14.24□□□□□ -0.13
DENND3-217ENST00000521835 MARCKSP29966 332 aaPredicted RBP14.24□□□□□ -0.13
DENND3-217ENST00000521835 STK38Q15208 465 aa14.24□□□□□ -0.13
DENND3-217ENST00000521835 HLFQ16534 295 aa14.24□□□□□ -0.13
DENND3-217ENST00000521835 MICU3Q86XE3 530 aa14.24□□□□□ -0.13
DENND3-217ENST00000521835 CLIP2Q9UDT6 1046 aa14.24□□□□□ -0.13
DENND3-217ENST00000521835 PRC1O43663 620 aa14.24□□□□□ -0.13
DENND3-217ENST00000521835 ATP2B1P20020 1258 aa14.24□□□□□ -0.13
DENND3-217ENST00000521835 PTPN21Q16825 1174 aa14.24□□□□□ -0.13
DENND3-217ENST00000521835 BRINP3Q76B58 766 aa14.24□□□□□ -0.13
DENND3-217ENST00000521835 CFAP45Q9UL16 551 aa14.24□□□□□ -0.13
DENND3-217ENST00000521835 ZMYM1Q5SVZ6 1142 aa14.24□□□□□ -0.13
DENND3-217ENST00000521835 UTP14CQ5TAP6 766 aaKnown RBP14.24□□□□□ -0.13
DENND3-217ENST00000521835 GREM2Q9H772 168 aa14.24□□□□□ -0.13
DENND3-217ENST00000521835 SPATA31A3Q5VYP0 1347 aa14.23□□□□□ -0.13
DENND3-217ENST00000521835 FGAP02671 866 aa14.23□□□□□ -0.13
DENND3-217ENST00000521835 PDIA3P30101 505 aaKnown RBP14.23□□□□□ -0.13
DENND3-217ENST00000521835 CHAF1AQ13111 956 aaPredicted RBP14.23□□□□□ -0.13
DENND3-217ENST00000521835 IMMTQ16891 758 aaKnown RBP14.23□□□□□ -0.13
DENND3-217ENST00000521835 HSP90AA4PQ58FG1 418 aa14.23□□□□□ -0.13
DENND3-217ENST00000521835 USPL1Q5W0Q7 1092 aa14.23□□□□□ -0.13
DENND3-217ENST00000521835 TRMT1Q9NXH9 659 aaKnown RBP14.23□□□□□ -0.13
DENND3-217ENST00000521835 ORC3Q9UBD5 711 aaPredicted RBP14.23□□□□□ -0.13
DENND3-217ENST00000521835 SLC9C2Q5TAH2 1124 aa14.23□□□□□ -0.13
DENND3-217ENST00000521835 C8orf76Q96K31 380 aa14.23□□□□□ -0.13
DENND3-217ENST00000521835 TRMT112Q9UI30 125 aaKnown RBP14.23□□□□□ -0.13
DENND3-217ENST00000521835 SLIT3O75094 1523 aa14.23□□□□□ -0.13
DENND3-217ENST00000521835 ATP2B3Q16720 1220 aa14.22□□□□□ -0.13
DENND3-217ENST00000521835 NFXL1Q6ZNB6 911 aa14.22□□□□□ -0.13
DENND3-217ENST00000521835 CCDC191Q8NCU4 936 aa14.22□□□□□ -0.13
DENND3-217ENST00000521835 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.22□□□□□ -0.13
DENND3-217ENST00000521835 GPAA1O43292 621 aa14.22□□□□□ -0.13
DENND3-217ENST00000521835 PFKFB2O60825 505 aa14.22□□□□□ -0.13
DENND3-217ENST00000521835 SECISBP2LQ93073 1101 aaKnown RBP14.22□□□□□ -0.13
DENND3-217ENST00000521835 PHKBQ93100 1093 aa14.22□□□□□ -0.13
DENND3-217ENST00000521835 ITGA6P23229 1130 aa14.22□□□□□ -0.13
DENND3-217ENST00000521835 DMTNQ08495 405 aa14.22□□□□□ -0.13
DENND3-217ENST00000521835 TEX2Q8IWB9 1127 aa14.22□□□□□ -0.13
DENND3-217ENST00000521835 AOPEPQ8N6M6 819 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms