RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 NMIQ13287 307 aaPredicted RBP18.57■□□□□ 0.56
USP42-207ENST00000521713 STXBP4Q6ZWJ1 553 aa18.57■□□□□ 0.56
USP42-207ENST00000521713 G2E3Q7L622 706 aa18.57■□□□□ 0.56
USP42-207ENST00000521713 TTC6Q86TZ1 520 aa18.57■□□□□ 0.56
USP42-207ENST00000521713 SKIDA1Q1XH10 827 aa18.56■□□□□ 0.56
USP42-207ENST00000521713 SMC5Q8IY18 1101 aa18.56■□□□□ 0.56
USP42-207ENST00000521713 KIF5CO60282 957 aa18.56■□□□□ 0.56
USP42-207ENST00000521713 SEPT11Q9NVA2 429 aaKnown RBP18.56■□□□□ 0.56
USP42-207ENST00000521713 ZHX1Q9UKY1 873 aaPredicted RBP18.56■□□□□ 0.56
USP42-207ENST00000521713 INSRP06213 1382 aa18.56■□□□□ 0.56
USP42-207ENST00000521713 RLBP1P12271 317 aa18.56■□□□□ 0.56
USP42-207ENST00000521713 PUM3Q15397 648 aaKnown RBP18.56■□□□□ 0.56
USP42-207ENST00000521713 MAGEB6Q8N7X4 407 aa18.56■□□□□ 0.56
USP42-207ENST00000521713 FSIP1Q8NA03 581 aa18.56■□□□□ 0.56
USP42-207ENST00000521713 LARP6Q9BRS8 491 aaKnown RBP18.56■□□□□ 0.56
USP42-207ENST00000521713 METP08581 1390 aa18.56■□□□□ 0.56
USP42-207ENST00000521713 KANK3Q6NY19 840 aa18.56■□□□□ 0.56
USP42-207ENST00000521713 UBA5Q9GZZ9 404 aa18.56■□□□□ 0.56
USP42-207ENST00000521713 HCLS1P14317 486 aaPredicted RBP18.55■□□□□ 0.56
USP42-207ENST00000521713 LMOD1P29536 600 aaPredicted RBP18.55■□□□□ 0.56
USP42-207ENST00000521713 CASQ1P31415 396 aa18.55■□□□□ 0.56
USP42-207ENST00000521713 CAMK4Q16566 473 aa18.55■□□□□ 0.56
USP42-207ENST00000521713 FLAD1Q8NFF5 587 aa18.55■□□□□ 0.56
USP42-207ENST00000521713 TRIM35Q9UPQ4 493 aa18.55■□□□□ 0.56
USP42-207ENST00000521713 SSFA2P28290 1259 aa18.55■□□□□ 0.56
USP42-207ENST00000521713 UFL1O94874 794 aa18.55■□□□□ 0.56
USP42-207ENST00000521713 USP25Q9UHP3 1055 aa18.55■□□□□ 0.56
USP42-207ENST00000521713 APBA3O96018 575 aa18.55■□□□□ 0.56
USP42-207ENST00000521713 HIBADHP31937 336 aaKnown RBP18.55■□□□□ 0.56
USP42-207ENST00000521713 ERMNQ8TAM6 284 aa18.55■□□□□ 0.56
USP42-207ENST00000521713 GGA1Q9UJY5 639 aa18.55■□□□□ 0.56
USP42-207ENST00000521713 B4DLN1 442 aa18.54■□□□□ 0.56
USP42-207ENST00000521713 TUBB4AP04350 444 aa18.54■□□□□ 0.56
USP42-207ENST00000521713 MRPL12P52815 198 aaKnown RBP18.54■□□□□ 0.56
USP42-207ENST00000521713 EIF4A1P60842 406 aaKnown RBP18.54■□□□□ 0.56
USP42-207ENST00000521713 URI1O94763 535 aaPredicted RBP18.54■□□□□ 0.56
USP42-207ENST00000521713 KLHL10Q6JEL2 608 aa18.54■□□□□ 0.56
USP42-207ENST00000521713 DYDC1Q8WWB3 177 aa18.54■□□□□ 0.56
USP42-207ENST00000521713 CENPHQ9H3R5 247 aa18.54■□□□□ 0.56
USP42-207ENST00000521713 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.54■□□□□ 0.56
USP42-207ENST00000521713 CCDC171Q6TFL3 1326 aa18.54■□□□□ 0.56
USP42-207ENST00000521713 H0YIN7 160 aa18.54■□□□□ 0.56
USP42-207ENST00000521713 ZBTB7BO15156 539 aaPredicted RBP18.54■□□□□ 0.56
USP42-207ENST00000521713 PHKG2P15735 406 aa18.54■□□□□ 0.56
USP42-207ENST00000521713 CERS3Q8IU89 383 aa18.54■□□□□ 0.56
USP42-207ENST00000521713 RTL9Q8NET4 1388 aa18.53■□□□□ 0.56
USP42-207ENST00000521713 C16orf71Q8IYS4 520 aaPredicted RBP18.53■□□□□ 0.56
USP42-207ENST00000521713 PRC1O43663 620 aa18.53■□□□□ 0.56
USP42-207ENST00000521713 XRCC6P12956 609 aaKnown RBP eCLIP18.53■□□□□ 0.56
USP42-207ENST00000521713 MAST3O60307 1309 aa18.53■□□□□ 0.56
USP42-207ENST00000521713 CFAP65Q6ZU64 1925 aaKnown RBP18.53■□□□□ 0.56
USP42-207ENST00000521713 A0A1B0GUL7 405 aa18.53■□□□□ 0.56
USP42-207ENST00000521713 FAM193AP78312 1265 aa18.53■□□□□ 0.56
USP42-207ENST00000521713 RAB11FIP4Q86YS3 637 aa18.53■□□□□ 0.56
USP42-207ENST00000521713 ALG1Q9BT22 464 aa18.53■□□□□ 0.56
USP42-207ENST00000521713 KIAA0232Q92628 1395 aa18.53■□□□□ 0.56
USP42-207ENST00000521713 TRPC5Q9UL62 973 aaPredicted RBP18.52■□□□□ 0.56
USP42-207ENST00000521713 SAMM50Q9Y512 469 aa18.52■□□□□ 0.56
USP42-207ENST00000521713 CETN1Q12798 172 aa18.52■□□□□ 0.56
USP42-207ENST00000521713 LRSAM1Q6UWE0 723 aa18.52■□□□□ 0.56
USP42-207ENST00000521713 SUPT20HQ8NEM7 779 aa18.52■□□□□ 0.56
USP42-207ENST00000521713 TMX3Q96JJ7 454 aa18.52■□□□□ 0.56
USP42-207ENST00000521713 ADCY5O95622 1261 aa18.52■□□□□ 0.56
USP42-207ENST00000521713 IDEP14735 1019 aa18.52■□□□□ 0.56
USP42-207ENST00000521713 GTF2F1P35269 517 aaKnown RBP eCLIP18.52■□□□□ 0.56
USP42-207ENST00000521713 RBM26Q5T8P6 1007 aaKnown RBP18.52■□□□□ 0.56
USP42-207ENST00000521713 MIGA1Q8NAN2 632 aa18.52■□□□□ 0.56
USP42-207ENST00000521713 TFIP11Q9UBB9 837 aaKnown RBP18.52■□□□□ 0.56
USP42-207ENST00000521713 VPS36Q86VN1 386 aa18.52■□□□□ 0.55
USP42-207ENST00000521713 TNNQ9UQP3 1299 aa18.52■□□□□ 0.55
USP42-207ENST00000521713 ERBB4Q15303 1308 aa18.52■□□□□ 0.55
USP42-207ENST00000521713 IVLP07476 585 aa18.51■□□□□ 0.55
USP42-207ENST00000521713 GCKRQ14397 625 aa18.51■□□□□ 0.55
USP42-207ENST00000521713 SEPT7Q16181 437 aaKnown RBP18.51■□□□□ 0.55
USP42-207ENST00000521713 HELLSQ9NRZ9 838 aa18.51■□□□□ 0.55
USP42-207ENST00000521713 ERVK-7P63135 1459 aa18.51■□□□□ 0.55
USP42-207ENST00000521713 HECW2Q9P2P5 1572 aa18.51■□□□□ 0.55
USP42-207ENST00000521713 CALML3P27482 149 aa18.51■□□□□ 0.55
USP42-207ENST00000521713 ZKSCAN5Q9Y2L8 839 aa18.51■□□□□ 0.55
USP42-207ENST00000521713 GCC2Q8IWJ2 1684 aa18.51■□□□□ 0.55
USP42-207ENST00000521713 Q6ZUG5 572 aa18.51■□□□□ 0.55
USP42-207ENST00000521713 KIAA1328Q86T90 577 aa18.51■□□□□ 0.55
USP42-207ENST00000521713 WDR66Q8TBY9 1149 aa18.51■□□□□ 0.55
USP42-207ENST00000521713 USP19O94966 1318 aa18.51■□□□□ 0.55
USP42-207ENST00000521713 CHD1O14646 1710 aa18.51■□□□□ 0.55
USP42-207ENST00000521713 NEFHP12036 1026 aa18.5■□□□□ 0.55
USP42-207ENST00000521713 IBSPP21815 317 aaPredicted RBP18.5■□□□□ 0.55
USP42-207ENST00000521713 CCDC102BQ68D86 513 aa18.5■□□□□ 0.55
USP42-207ENST00000521713 CCDC150Q8NCX0 1101 aa18.5■□□□□ 0.55
USP42-207ENST00000521713 TAF4BQ92750 862 aa18.5■□□□□ 0.55
USP42-207ENST00000521713 C16orf45Q96MC5 204 aaPredicted RBP18.5■□□□□ 0.55
USP42-207ENST00000521713 ZCCHC11Q5TAX3 1644 aaKnown RBP18.5■□□□□ 0.55
USP42-207ENST00000521713 FAM135BQ49AJ0 1406 aa18.5■□□□□ 0.55
USP42-207ENST00000521713 CCDC94Q9BW85 323 aaPredicted RBP18.5■□□□□ 0.55
USP42-207ENST00000521713 MYCNP04198 464 aaPredicted RBP18.5■□□□□ 0.55
USP42-207ENST00000521713 CETN2P41208 172 aa18.5■□□□□ 0.55
USP42-207ENST00000521713 CARD10Q9BWT7 1032 aa18.5■□□□□ 0.55
USP42-207ENST00000521713 SH2D4AQ9H788 454 aa18.5■□□□□ 0.55
USP42-207ENST00000521713 TTC37Q6PGP7 1564 aa18.5■□□□□ 0.55
USP42-207ENST00000521713 TOP1P11387 765 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms