RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 SH2B1Q9NRF2 756 aaPredicted RBP8.91□□□□□ -0.98
CLK4-207ENST00000520909 TGFB1P01137 390 aa8.9□□□□□ -0.98
CLK4-207ENST00000520909 TXKP42681 527 aa8.9□□□□□ -0.98
CLK4-207ENST00000520909 SRPK2P78362 688 aaKnown RBP8.9□□□□□ -0.98
CLK4-207ENST00000520909 KIAA1211Q6ZU35 1233 aa8.9□□□□□ -0.98
CLK4-207ENST00000520909 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.89□□□□□ -0.99
CLK4-207ENST00000520909 MED26O95402 600 aa8.89□□□□□ -0.99
CLK4-207ENST00000520909 CYP2E1P05181 493 aaPredicted RBP8.89□□□□□ -0.99
CLK4-207ENST00000520909 IRAK1P51617 712 aa8.89□□□□□ -0.99
CLK4-207ENST00000520909 NFIAQ12857 509 aa8.89□□□□□ -0.99
CLK4-207ENST00000520909 LCE1DQ5T752 114 aa8.89□□□□□ -0.99
CLK4-207ENST00000520909 TMEM164Q5U3C3 297 aa8.89□□□□□ -0.99
CLK4-207ENST00000520909 PDE12Q6L8Q7 609 aaKnown RBP8.89□□□□□ -0.99
CLK4-207ENST00000520909 FAM46AQ96IP4 442 aaKnown RBP8.89□□□□□ -0.99
CLK4-207ENST00000520909 FMNL2Q96PY5 1086 aa8.89□□□□□ -0.99
CLK4-207ENST00000520909 ADAM19Q9H013 955 aa8.89□□□□□ -0.99
CLK4-207ENST00000520909 ELP3Q9H9T3 547 aa8.89□□□□□ -0.99
CLK4-207ENST00000520909 SEC31BQ9NQW1 1179 aa8.89□□□□□ -0.99
CLK4-207ENST00000520909 TM4SF5O14894 197 aa8.88□□□□□ -0.99
CLK4-207ENST00000520909 EPHA1P21709 976 aa8.88□□□□□ -0.99
CLK4-207ENST00000520909 GRIK1P39086 918 aa8.88□□□□□ -0.99
CLK4-207ENST00000520909 CABP4P57796 275 aa8.88□□□□□ -0.99
CLK4-207ENST00000520909 INTS5Q6P9B9 1019 aaKnown RBP8.88□□□□□ -0.99
CLK4-207ENST00000520909 ADAMTSL4Q6UY14 1074 aa8.88□□□□□ -0.99
CLK4-207ENST00000520909 TRIM42Q8IWZ5 723 aa8.88□□□□□ -0.99
CLK4-207ENST00000520909 CLP1Q92989 425 aaKnown RBP8.88□□□□□ -0.99
CLK4-207ENST00000520909 KLHDC7BQ96G42 594 aa8.88□□□□□ -0.99
CLK4-207ENST00000520909 POP1Q99575 1024 aaKnown RBP8.88□□□□□ -0.99
CLK4-207ENST00000520909 KIAA1324LA8MWY0 1029 aaPredicted RBP8.87□□□□□ -0.99
CLK4-207ENST00000520909 DDX3YO15523 660 aaKnown RBP8.87□□□□□ -0.99
CLK4-207ENST00000520909 SART1O43290 800 aaKnown RBP8.87□□□□□ -0.99
CLK4-207ENST00000520909 RPLP1P05386 114 aaKnown RBP8.87□□□□□ -0.99
CLK4-207ENST00000520909 YBX3P16989 372 aaKnown RBP eCLIP8.87□□□□□ -0.99
CLK4-207ENST00000520909 RNF43Q68DV7 783 aa8.87□□□□□ -0.99
CLK4-207ENST00000520909 ZNF438Q7Z4V0 828 aa8.87□□□□□ -0.99
CLK4-207ENST00000520909 ZDHHC13Q8IUH4 622 aa8.87□□□□□ -0.99
CLK4-207ENST00000520909 NUDT16Q96DE0 195 aaKnown RBP8.87□□□□□ -0.99
CLK4-207ENST00000520909 MYRFLQ96LU7 910 aa8.87□□□□□ -0.99
CLK4-207ENST00000520909 C7orf69Q9H7B7 122 aa8.87□□□□□ -0.99
CLK4-207ENST00000520909 HMX2A2RU54 273 aa8.86□□□□□ -0.99
CLK4-207ENST00000520909 CLEC10AQ8IUN9 316 aa8.86□□□□□ -0.99
CLK4-207ENST00000520909 WNT8BQ93098 351 aa8.86□□□□□ -0.99
CLK4-207ENST00000520909 DBNDD2Q9BQY9 259 aa8.86□□□□□ -0.99
CLK4-207ENST00000520909 TMEM63CQ9P1W3 806 aa8.86□□□□□ -0.99
CLK4-207ENST00000520909 PIP4K2BP78356 416 aa8.85□□□□□ -0.99
CLK4-207ENST00000520909 UBASH3BQ8TF42 649 aa8.85□□□□□ -0.99
CLK4-207ENST00000520909 FOXD4L4Q8WXT5 416 aaPredicted RBP8.85□□□□□ -0.99
CLK4-207ENST00000520909 OSGEPQ9NPF4 335 aa8.85□□□□□ -0.99
CLK4-207ENST00000520909 H3BRJ5 948 aa8.84□□□□□ -0.99
CLK4-207ENST00000520909 ADAM11O75078 769 aa8.84□□□□□ -0.99
CLK4-207ENST00000520909 PCSK2P16519 638 aa8.84□□□□□ -0.99
CLK4-207ENST00000520909 GP2P55259 537 aaKnown RBP8.84□□□□□ -0.99
CLK4-207ENST00000520909 ANKRD34AQ69YU3 496 aa8.84□□□□□ -0.99
CLK4-207ENST00000520909 FAM20CQ8IXL6 584 aa8.84□□□□□ -0.99
CLK4-207ENST00000520909 FAM83CQ9BQN1 747 aa8.84□□□□□ -0.99
CLK4-207ENST00000520909 KCNF1Q9H3M0 494 aa8.84□□□□□ -0.99
CLK4-207ENST00000520909 CNTN3Q9P232 1028 aa8.84□□□□□ -0.99
CLK4-207ENST00000520909 KANSL3Q9P2N6 904 aa8.84□□□□□ -0.99
CLK4-207ENST00000520909 SALL4Q9UJQ4 1053 aa8.84□□□□□ -0.99
CLK4-207ENST00000520909 BMP3P12645 472 aa8.83□□□□□ -1
CLK4-207ENST00000520909 CES1P23141 567 aa8.83□□□□□ -1
CLK4-207ENST00000520909 TTC16Q8NEE8 873 aa8.83□□□□□ -1
CLK4-207ENST00000520909 RNF208Q9H0X6 261 aa8.83□□□□□ -1
CLK4-207ENST00000520909 OAS3Q9Y6K5 1087 aaKnown RBP8.83□□□□□ -1
CLK4-207ENST00000520909 ATP2B4P23634 1241 aa8.82□□□□□ -1
CLK4-207ENST00000520909 ARL4DP49703 201 aa8.82□□□□□ -1
CLK4-207ENST00000520909 XKR5Q6UX68 686 aa8.82□□□□□ -1
CLK4-207ENST00000520909 ATCAYQ86WG3 371 aa8.82□□□□□ -1
CLK4-207ENST00000520909 SEPT3Q9UH03 358 aa8.82□□□□□ -1
CLK4-207ENST00000520909 TAL1P17542 331 aaPredicted RBP8.81□□□□□ -1
CLK4-207ENST00000520909 BEND4Q6ZU67 534 aa8.81□□□□□ -1
CLK4-207ENST00000520909 C1orf127Q8N9H9 656 aa8.81□□□□□ -1
CLK4-207ENST00000520909 PMEPA1Q969W9 287 aa8.81□□□□□ -1
CLK4-207ENST00000520909 PRR19A6NJB7 356 aa8.8□□□□□ -1
CLK4-207ENST00000520909 PDE2AO00408 941 aaPredicted RBP8.8□□□□□ -1
CLK4-207ENST00000520909 NLRP12P59046 1061 aa8.8□□□□□ -1
CLK4-207ENST00000520909 DNM1Q05193 864 aaKnown RBP8.8□□□□□ -1
CLK4-207ENST00000520909 FDX2Q6P4F2 183 aa8.8□□□□□ -1
CLK4-207ENST00000520909 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.8□□□□□ -1
CLK4-207ENST00000520909 SLC7A3Q8WY07 619 aa8.8□□□□□ -1
CLK4-207ENST00000520909 EDEM1Q92611 657 aa8.8□□□□□ -1
CLK4-207ENST00000520909 RUSC1Q9BVN2 902 aa8.8□□□□□ -1
CLK4-207ENST00000520909 ZMYND15Q9H091 742 aa8.8□□□□□ -1
CLK4-207ENST00000520909 DZANK1Q9NVP4 752 aa8.8□□□□□ -1
CLK4-207ENST00000520909 NFKBIEO00221 500 aa8.8□□□□□ -1
CLK4-207ENST00000520909 SPINK2P20155 84 aa8.8□□□□□ -1
CLK4-207ENST00000520909 C8orf34Q49A92 452 aa8.8□□□□□ -1
CLK4-207ENST00000520909 PBXIP1Q96AQ6 731 aa8.8□□□□□ -1
CLK4-207ENST00000520909 HIF3AQ9Y2N7 669 aa8.8□□□□□ -1
CLK4-207ENST00000520909 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.8□□□□□ -1
CLK4-207ENST00000520909 WNT11O96014 354 aa8.79□□□□□ -1
CLK4-207ENST00000520909 PREPP48147 710 aa8.79□□□□□ -1
CLK4-207ENST00000520909 DTX1Q86Y01 620 aa8.79□□□□□ -1
CLK4-207ENST00000520909 SHKBP1Q8TBC3 707 aa8.79□□□□□ -1
CLK4-207ENST00000520909 SLAIN2Q9P270 581 aa8.79□□□□□ -1
CLK4-207ENST00000520909 MEGF11A6BM72 1044 aa8.78□□□□□ -1
CLK4-207ENST00000520909 GAS2O43903 313 aaKnown RBP8.78□□□□□ -1
CLK4-207ENST00000520909 ACPPP15309 386 aa8.78□□□□□ -1
CLK4-207ENST00000520909 C19orf57Q0VDD7 668 aa8.78□□□□□ -1
CLK4-207ENST00000520909 NOM1Q5C9Z4 860 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms