RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 HNRNPH2P55795 449 aaKnown RBP14.86□□□□□ -0.03
TRAPPC9-208ENST00000520857 ETF1P62495 437 aaKnown RBP14.86□□□□□ -0.03
TRAPPC9-208ENST00000520857 NAA16Q6N069 864 aaPredicted RBP14.86□□□□□ -0.03
TRAPPC9-208ENST00000520857 RALYLQ86SE5 291 aaKnown RBP14.86□□□□□ -0.03
TRAPPC9-208ENST00000520857 KCNB2Q92953 911 aa14.86□□□□□ -0.03
TRAPPC9-208ENST00000520857 ADCY9O60503 1353 aa14.85□□□□□ -0.03
TRAPPC9-208ENST00000520857 PSME1Q06323 249 aa14.85□□□□□ -0.03
TRAPPC9-208ENST00000520857 DBNLQ9UJU6 430 aaKnown RBP14.85□□□□□ -0.03
TRAPPC9-208ENST00000520857 ATP2B1P20020 1258 aa14.85□□□□□ -0.03
TRAPPC9-208ENST00000520857 LMAN1P49257 510 aa14.85□□□□□ -0.03
TRAPPC9-208ENST00000520857 IMPACTQ9P2X3 320 aa14.85□□□□□ -0.03
TRAPPC9-208ENST00000520857 GOLGA8BA8MQT2 603 aa14.85□□□□□ -0.03
TRAPPC9-208ENST00000520857 ATP1A3P13637 1013 aa14.85□□□□□ -0.03
TRAPPC9-208ENST00000520857 CASQ1P31415 396 aa14.85□□□□□ -0.03
TRAPPC9-208ENST00000520857 MTX1Q13505 466 aa14.85□□□□□ -0.03
TRAPPC9-208ENST00000520857 SKIDA1Q1XH10 827 aa14.85□□□□□ -0.03
TRAPPC9-208ENST00000520857 XAGE3Q8WTP9 111 aa14.85□□□□□ -0.03
TRAPPC9-208ENST00000520857 ZCCHC17Q9NP64 241 aaKnown RBP14.85□□□□□ -0.03
TRAPPC9-208ENST00000520857 TMEM51Q9NW97 253 aa14.85□□□□□ -0.03
TRAPPC9-208ENST00000520857 NEO1Q92859 1461 aa14.84□□□□□ -0.03
TRAPPC9-208ENST00000520857 CEP170BQ9Y4F5 1589 aaPredicted RBP14.84□□□□□ -0.03
TRAPPC9-208ENST00000520857 ARMCX5Q6P1M9 558 aa14.84□□□□□ -0.03
TRAPPC9-208ENST00000520857 COPS6Q7L5N1 327 aa14.84□□□□□ -0.03
TRAPPC9-208ENST00000520857 SNRKQ9NRH2 765 aa14.84□□□□□ -0.03
TRAPPC9-208ENST00000520857 CLIC4Q9Y696 253 aa14.84□□□□□ -0.03
TRAPPC9-208ENST00000520857 KDRP35968 1356 aa14.84□□□□□ -0.03
TRAPPC9-208ENST00000520857 PFKFB2O60825 505 aa14.84□□□□□ -0.03
TRAPPC9-208ENST00000520857 ZNF202O95125 648 aa14.84□□□□□ -0.03
TRAPPC9-208ENST00000520857 GJB4Q9NTQ9 266 aa14.84□□□□□ -0.03
TRAPPC9-208ENST00000520857 ZSCAN12O43309 604 aa14.84□□□□□ -0.03
TRAPPC9-208ENST00000520857 CBFA2T2O43439 604 aa14.84□□□□□ -0.03
TRAPPC9-208ENST00000520857 CEBPAP49715 358 aaPredicted RBP14.84□□□□□ -0.03
TRAPPC9-208ENST00000520857 TNNI3KQ59H18 835 aa14.84□□□□□ -0.03
TRAPPC9-208ENST00000520857 LLPHQ9BRT6 129 aaKnown RBP14.84□□□□□ -0.03
TRAPPC9-208ENST00000520857 ZNF446Q9NWS9 450 aa14.84□□□□□ -0.03
TRAPPC9-208ENST00000520857 FPGT-TNNI3KV9GXZ4 949 aa14.84□□□□□ -0.03
TRAPPC9-208ENST00000520857 SETD1BQ9UPS6 1966 aaKnown RBP14.83□□□□□ -0.03
TRAPPC9-208ENST00000520857 HOXB7P09629 217 aa14.83□□□□□ -0.04
TRAPPC9-208ENST00000520857 KRBA2Q6ZNG9 492 aa14.83□□□□□ -0.04
TRAPPC9-208ENST00000520857 KCNG4Q8TDN1 519 aa14.83□□□□□ -0.04
TRAPPC9-208ENST00000520857 CHMP4CQ96CF2 233 aa14.83□□□□□ -0.04
TRAPPC9-208ENST00000520857 GIGYF1O75420 1035 aaPredicted RBP14.83□□□□□ -0.04
TRAPPC9-208ENST00000520857 APPP05067 770 aa14.83□□□□□ -0.04
TRAPPC9-208ENST00000520857 SYKP43405 635 aa14.83□□□□□ -0.04
TRAPPC9-208ENST00000520857 KARSQ15046 597 aaKnown RBP14.83□□□□□ -0.04
TRAPPC9-208ENST00000520857 SIRT1Q96EB6 747 aa14.83□□□□□ -0.04
TRAPPC9-208ENST00000520857 GPHNQ9NQX3 736 aaPredicted RBP14.83□□□□□ -0.04
TRAPPC9-208ENST00000520857 A0A087WZG4 1122 aa14.82□□□□□ -0.04
TRAPPC9-208ENST00000520857 KLF18A0A0U1RQI7 1052 aa14.82□□□□□ -0.04
TRAPPC9-208ENST00000520857 LTKP29376 864 aa14.82□□□□□ -0.04
TRAPPC9-208ENST00000520857 ARFGAP3Q9NP61 516 aa14.82□□□□□ -0.04
TRAPPC9-208ENST00000520857 DHX16O60231 1041 aaKnown RBP14.82□□□□□ -0.04
TRAPPC9-208ENST00000520857 OAS2P29728 719 aaKnown RBP14.82□□□□□ -0.04
TRAPPC9-208ENST00000520857 TIMM10P62072 90 aa14.82□□□□□ -0.04
TRAPPC9-208ENST00000520857 PDE4CQ08493 712 aa14.82□□□□□ -0.04
TRAPPC9-208ENST00000520857 ADALQ6DHV7 355 aa14.82□□□□□ -0.04
TRAPPC9-208ENST00000520857 AK7Q96M32 723 aa14.82□□□□□ -0.04
TRAPPC9-208ENST00000520857 PREX1Q8TCU6 1659 aa14.82□□□□□ -0.04
TRAPPC9-208ENST00000520857 MCM6Q14566 821 aa14.82□□□□□ -0.04
TRAPPC9-208ENST00000520857 HSP90AB3PQ58FF7 597 aa14.82□□□□□ -0.04
TRAPPC9-208ENST00000520857 AKAP4Q5JQC9 854 aa14.82□□□□□ -0.04
TRAPPC9-208ENST00000520857 RIMS1Q86UR5 1692 aaKnown RBP14.82□□□□□ -0.04
TRAPPC9-208ENST00000520857 USP31Q70CQ4 1352 aa14.81□□□□□ -0.04
TRAPPC9-208ENST00000520857 PSDA5PKW4 1024 aaPredicted RBP14.81□□□□□ -0.04
TRAPPC9-208ENST00000520857 GYS2P54840 703 aa14.81□□□□□ -0.04
TRAPPC9-208ENST00000520857 EPHA10Q5JZY3 1008 aa14.81□□□□□ -0.04
TRAPPC9-208ENST00000520857 STOX1Q6ZVD7 989 aa14.81□□□□□ -0.04
TRAPPC9-208ENST00000520857 C10orf67Q8IYJ2 551 aa14.81□□□□□ -0.04
TRAPPC9-208ENST00000520857 CCDC12Q8WUD4 166 aaPredicted RBP14.81□□□□□ -0.04
TRAPPC9-208ENST00000520857 CPLX3Q8WVH0 158 aa14.81□□□□□ -0.04
TRAPPC9-208ENST00000520857 ATP5JP18859 108 aa14.81□□□□□ -0.04
TRAPPC9-208ENST00000520857 TTC5Q8N0Z6 440 aa14.81□□□□□ -0.04
TRAPPC9-208ENST00000520857 CCDC191Q8NCU4 936 aa14.81□□□□□ -0.04
TRAPPC9-208ENST00000520857 OSBPL5Q9H0X9 879 aaPredicted RBP14.81□□□□□ -0.04
TRAPPC9-208ENST00000520857 RNMTO43148 476 aaKnown RBP14.8□□□□□ -0.04
TRAPPC9-208ENST00000520857 IFIT1P09914 478 aaKnown RBP14.8□□□□□ -0.04
TRAPPC9-208ENST00000520857 TRDNQ13061 729 aa14.8□□□□□ -0.04
TRAPPC9-208ENST00000520857 TRIM29Q14134 588 aa14.8□□□□□ -0.04
TRAPPC9-208ENST00000520857 DHX8Q14562 1220 aaKnown RBP14.8□□□□□ -0.04
TRAPPC9-208ENST00000520857 FMR1NBQ8N0W7 255 aaPredicted RBP14.8□□□□□ -0.04
TRAPPC9-208ENST00000520857 CCDC85AQ96PX6 553 aaPredicted RBP14.8□□□□□ -0.04
TRAPPC9-208ENST00000520857 E7EWF7 191 aa14.8□□□□□ -0.04
TRAPPC9-208ENST00000520857 TPM1P09493 284 aa14.8□□□□□ -0.04
TRAPPC9-208ENST00000520857 RXRAP19793 462 aa14.8□□□□□ -0.04
TRAPPC9-208ENST00000520857 NLRP12P59046 1061 aa14.8□□□□□ -0.04
TRAPPC9-208ENST00000520857 NBPF11Q86T75 865 aa14.8□□□□□ -0.04
TRAPPC9-208ENST00000520857 TXLNBQ8N3L3 684 aa14.8□□□□□ -0.04
TRAPPC9-208ENST00000520857 DDX21Q9NR30 783 aaKnown RBP eCLIP14.8□□□□□ -0.04
TRAPPC9-208ENST00000520857 CWC15Q9P013 229 aaKnown RBP14.8□□□□□ -0.04
TRAPPC9-208ENST00000520857 PDIA3P30101 505 aaKnown RBP14.8□□□□□ -0.04
TRAPPC9-208ENST00000520857 CPLX2Q6PUV4 134 aaKnown RBP14.8□□□□□ -0.04
TRAPPC9-208ENST00000520857 LMBR1LQ6UX01 489 aa14.8□□□□□ -0.04
TRAPPC9-208ENST00000520857 NFXL1Q6ZNB6 911 aa14.8□□□□□ -0.04
TRAPPC9-208ENST00000520857 TOMM22Q9NS69 142 aa14.8□□□□□ -0.04
TRAPPC9-208ENST00000520857 PAG1Q9NWQ8 432 aa14.8□□□□□ -0.04
TRAPPC9-208ENST00000520857 SMC1AQ14683 1233 aaKnown RBP14.79□□□□□ -0.04
TRAPPC9-208ENST00000520857 ESCO1Q5FWF5 840 aa14.79□□□□□ -0.04
TRAPPC9-208ENST00000520857 ATL3Q6DD88 541 aa14.79□□□□□ -0.04
TRAPPC9-208ENST00000520857 CNNM3Q8NE01 707 aa14.79□□□□□ -0.04
TRAPPC9-208ENST00000520857 MED23Q9ULK4 1368 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms