RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 KCNB2Q92953 911 aa19.39■□□□□ 0.69
SNHG6-201ENST00000520348 ANKRD2Q9GZV1 360 aa19.39■□□□□ 0.69
SNHG6-201ENST00000520348 NDUFB9Q9Y6M9 179 aa19.39■□□□□ 0.69
SNHG6-201ENST00000520348 IRS2Q9Y4H2 1338 aa19.39■□□□□ 0.69
SNHG6-201ENST00000520348 MCCP23508 829 aa19.38■□□□□ 0.69
SNHG6-201ENST00000520348 BECN1Q14457 450 aa19.38■□□□□ 0.69
SNHG6-201ENST00000520348 CCDC171Q6TFL3 1326 aa19.38■□□□□ 0.69
SNHG6-201ENST00000520348 IL27Q8NEV9 243 aa19.38■□□□□ 0.69
SNHG6-201ENST00000520348 TBC1D2Q9BYX2 928 aa19.38■□□□□ 0.69
SNHG6-201ENST00000520348 STK32BQ9NY57 414 aa19.38■□□□□ 0.69
SNHG6-201ENST00000520348 MYH7P12883 1935 aa19.37■□□□□ 0.69
SNHG6-201ENST00000520348 LTBP1Q14766 1721 aa19.37■□□□□ 0.69
SNHG6-201ENST00000520348 ZAP70P43403 619 aa19.37■□□□□ 0.69
SNHG6-201ENST00000520348 ZMYM1Q5SVZ6 1142 aa19.37■□□□□ 0.69
SNHG6-201ENST00000520348 CRAMP1Q96RY5 1269 aa19.37■□□□□ 0.69
SNHG6-201ENST00000520348 BRIP1Q9BX63 1249 aa19.37■□□□□ 0.69
SNHG6-201ENST00000520348 ANTXR1Q9H6X2 564 aa19.37■□□□□ 0.69
SNHG6-201ENST00000520348 HELLSQ9NRZ9 838 aa19.37■□□□□ 0.69
SNHG6-201ENST00000520348 COL11A2P13942 1736 aaPredicted RBP19.37■□□□□ 0.69
SNHG6-201ENST00000520348 SNAP23O00161 211 aa19.36■□□□□ 0.69
SNHG6-201ENST00000520348 NPHP1O15259 732 aa19.36■□□□□ 0.69
SNHG6-201ENST00000520348 ZFYP08048 801 aaPredicted RBP19.36■□□□□ 0.69
SNHG6-201ENST00000520348 LRRFIP1Q32MZ4 808 aaKnown RBP19.36■□□□□ 0.69
SNHG6-201ENST00000520348 PDS5AQ29RF7 1337 aaKnown RBP19.35■□□□□ 0.69
SNHG6-201ENST00000520348 RNF113AO15541 343 aaKnown RBP19.35■□□□□ 0.69
SNHG6-201ENST00000520348 TTF1Q15361 905 aaPredicted RBP19.35■□□□□ 0.69
SNHG6-201ENST00000520348 KIAA1211Q6ZU35 1233 aa19.35■□□□□ 0.69
SNHG6-201ENST00000520348 CCDC125Q86Z20 511 aa19.35■□□□□ 0.69
SNHG6-201ENST00000520348 MAP4K1Q92918 833 aa19.35■□□□□ 0.69
SNHG6-201ENST00000520348 HMG20BQ9P0W2 317 aa19.35■□□□□ 0.69
SNHG6-201ENST00000520348 CYP2E1P05181 493 aaPredicted RBP19.34■□□□□ 0.69
SNHG6-201ENST00000520348 MMP10P09238 476 aa19.34■□□□□ 0.69
SNHG6-201ENST00000520348 PTH1RQ03431 593 aa19.34■□□□□ 0.69
SNHG6-201ENST00000520348 SF3B2Q13435 895 aaKnown RBP19.34■□□□□ 0.69
SNHG6-201ENST00000520348 RASGRF1Q13972 1273 aa19.34■□□□□ 0.69
SNHG6-201ENST00000520348 MCMDC2Q4G0Z9 681 aa19.34■□□□□ 0.69
SNHG6-201ENST00000520348 PI16Q6UXB8 463 aa19.34■□□□□ 0.69
SNHG6-201ENST00000520348 C15orf52Q6ZUT6 534 aaKnown RBP19.34■□□□□ 0.69
SNHG6-201ENST00000520348 TMC4Q7Z404 712 aa19.34■□□□□ 0.69
SNHG6-201ENST00000520348 ZNF589Q86UQ0 364 aaPredicted RBP19.34■□□□□ 0.69
SNHG6-201ENST00000520348 RPGRQ92834 1020 aaKnown RBP19.34■□□□□ 0.69
SNHG6-201ENST00000520348 RBM17Q96I25 401 aaKnown RBP19.34■□□□□ 0.69
SNHG6-201ENST00000520348 PALD1Q9ULE6 856 aa19.34■□□□□ 0.69
SNHG6-201ENST00000520348 FKBP4Q02790 459 aaKnown RBP eCLIP19.33■□□□□ 0.68
SNHG6-201ENST00000520348 FBXO33Q7Z6M2 555 aa19.33■□□□□ 0.68
SNHG6-201ENST00000520348 SPATA5Q8NB90 893 aa19.33■□□□□ 0.68
SNHG6-201ENST00000520348 COL1A1P02452 1464 aaPredicted RBP19.33■□□□□ 0.68
SNHG6-201ENST00000520348 SEMA3EO15041 775 aa19.32■□□□□ 0.68
SNHG6-201ENST00000520348 BBOX1O75936 387 aa19.32■□□□□ 0.68
SNHG6-201ENST00000520348 NECTIN1Q15223 517 aa19.32■□□□□ 0.68
SNHG6-201ENST00000520348 LEMD3Q9Y2U8 911 aa19.32■□□□□ 0.68
SNHG6-201ENST00000520348 PARP3Q9Y6F1 533 aa19.32■□□□□ 0.68
SNHG6-201ENST00000520348 MAST3O60307 1309 aa19.31■□□□□ 0.68
SNHG6-201ENST00000520348 XDHP47989 1333 aa19.31■□□□□ 0.68
SNHG6-201ENST00000520348 CHGBP05060 677 aa19.31■□□□□ 0.68
SNHG6-201ENST00000520348 ADD2P35612 726 aa19.31■□□□□ 0.68
SNHG6-201ENST00000520348 BCAMP50895 628 aa19.31■□□□□ 0.68
SNHG6-201ENST00000520348 DEFB132Q7Z7B7 95 aa19.31■□□□□ 0.68
SNHG6-201ENST00000520348 APPBP2Q92624 585 aa19.31■□□□□ 0.68
SNHG6-201ENST00000520348 FAM84BQ96KN1 310 aaPredicted RBP19.31■□□□□ 0.68
SNHG6-201ENST00000520348 PIH1D3Q9NQM4 214 aaKnown RBP19.31■□□□□ 0.68
SNHG6-201ENST00000520348 SRGNP10124 158 aa19.3■□□□□ 0.68
SNHG6-201ENST00000520348 UBE3CQ15386 1083 aa19.3■□□□□ 0.68
SNHG6-201ENST00000520348 ZSCAN25Q6NSZ9 544 aa19.3■□□□□ 0.68
SNHG6-201ENST00000520348 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.3■□□□□ 0.68
SNHG6-201ENST00000520348 PODXL2Q9NZ53 605 aa19.3■□□□□ 0.68
SNHG6-201ENST00000520348 RBM8AQ9Y5S9 174 aaKnown RBP19.3■□□□□ 0.68
SNHG6-201ENST00000520348 SNX14Q9Y5W7 946 aa19.3■□□□□ 0.68
SNHG6-201ENST00000520348 DUOX1Q9NRD9 1551 aa19.29■□□□□ 0.68
SNHG6-201ENST00000520348 CD2BP2O95400 341 aaKnown RBP19.29■□□□□ 0.68
SNHG6-201ENST00000520348 NPR1P16066 1061 aa19.29■□□□□ 0.68
SNHG6-201ENST00000520348 PDE6BP35913 854 aa19.29■□□□□ 0.68
SNHG6-201ENST00000520348 TSGA10IPQ3SY00 556 aa19.29■□□□□ 0.68
SNHG6-201ENST00000520348 HSCBQ8IWL3 235 aa19.29■□□□□ 0.68
SNHG6-201ENST00000520348 OSBP2Q969R2 916 aa19.29■□□□□ 0.68
SNHG6-201ENST00000520348 SEC62Q99442 399 aaKnown RBP19.29■□□□□ 0.68
SNHG6-201ENST00000520348 DSCC1Q9BVC3 393 aa19.29■□□□□ 0.68
SNHG6-201ENST00000520348 GNL3LQ9NVN8 582 aaKnown RBP19.29■□□□□ 0.68
SNHG6-201ENST00000520348 MYO5AQ9Y4I1 1855 aaKnown RBP19.28■□□□□ 0.68
SNHG6-201ENST00000520348 TCRBV5S4A2TA0A5A2 114 aa19.28■□□□□ 0.68
SNHG6-201ENST00000520348 WTIPA6NIX2 430 aaPredicted RBP19.28■□□□□ 0.68
SNHG6-201ENST00000520348 CAVIN4Q5BKX8 364 aa19.28■□□□□ 0.68
SNHG6-201ENST00000520348 TM6SF1Q9BZW5 370 aa19.28■□□□□ 0.68
SNHG6-201ENST00000520348 RPAP1Q9BWH6 1393 aaPredicted RBP19.28■□□□□ 0.68
SNHG6-201ENST00000520348 C10orf71Q711Q0 1435 aa19.27■□□□□ 0.68
SNHG6-201ENST00000520348 IGSF3O75054 1194 aa19.27■□□□□ 0.68
SNHG6-201ENST00000520348 KLRK1P26718 216 aa19.27■□□□□ 0.68
SNHG6-201ENST00000520348 GYG1P46976 350 aa19.27■□□□□ 0.68
SNHG6-201ENST00000520348 SLC4A3P48751 1232 aa19.27■□□□□ 0.68
SNHG6-201ENST00000520348 RASEFQ8IZ41 740 aa19.27■□□□□ 0.68
SNHG6-201ENST00000520348 SLC16A10Q8TF71 515 aa19.27■□□□□ 0.68
SNHG6-201ENST00000520348 U3KPZ7 1027 aaPredicted RBP19.27■□□□□ 0.68
SNHG6-201ENST00000520348 MAST2Q6P0Q8 1798 aa19.27■□□□□ 0.67
SNHG6-201ENST00000520348 MYH13Q9UKX3 1938 aa19.26■□□□□ 0.67
SNHG6-201ENST00000520348 K7ELQ4 463 aaPredicted RBP19.26■□□□□ 0.67
SNHG6-201ENST00000520348 M0R2C6 588 aa19.26■□□□□ 0.67
SNHG6-201ENST00000520348 PDE6AP16499 860 aa19.26■□□□□ 0.67
SNHG6-201ENST00000520348 KCNJ4P48050 445 aa19.26■□□□□ 0.67
SNHG6-201ENST00000520348 CREB3L3Q68CJ9 461 aa19.26■□□□□ 0.67
SNHG6-201ENST00000520348 MSL1Q68DK7 614 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms