RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 MYH16Q9H6N6 1097 aa10.18□□□□□ -0.78
CTHRC1-203ENST00000520337 CRB1P82279 1406 aa10.17□□□□□ -0.78
CTHRC1-203ENST00000520337 SCN11AQ9UI33 1791 aa10.17□□□□□ -0.78
CTHRC1-203ENST00000520337 NRAPQ86VF7 1730 aa10.17□□□□□ -0.78
CTHRC1-203ENST00000520337 CSB-PGBD3P0DP91 1061 aa10.17□□□□□ -0.78
CTHRC1-203ENST00000520337 CALD1Q05682 793 aaKnown RBP10.17□□□□□ -0.78
CTHRC1-203ENST00000520337 PLEKHO1Q53GL0 409 aaPredicted RBP10.17□□□□□ -0.78
CTHRC1-203ENST00000520337 MCM10Q7L590 875 aa10.17□□□□□ -0.78
CTHRC1-203ENST00000520337 TSR2Q969E8 191 aaKnown RBP10.17□□□□□ -0.78
CTHRC1-203ENST00000520337 ZNF395Q9H8N7 513 aaPredicted RBP10.17□□□□□ -0.78
CTHRC1-203ENST00000520337 CYLDQ9NQC7 956 aa10.17□□□□□ -0.78
CTHRC1-203ENST00000520337 IFT57Q9NWB7 429 aa10.17□□□□□ -0.78
CTHRC1-203ENST00000520337 ADAMTS7Q9UKP4 1686 aa10.17□□□□□ -0.78
CTHRC1-203ENST00000520337 MEGF6O75095 1541 aa10.17□□□□□ -0.78
CTHRC1-203ENST00000520337 SIPA1L3O60292 1781 aaPredicted RBP10.16□□□□□ -0.78
CTHRC1-203ENST00000520337 SHANK3Q9BYB0 1731 aa10.16□□□□□ -0.78
CTHRC1-203ENST00000520337 PARP4Q9UKK3 1724 aaKnown RBP10.16□□□□□ -0.78
CTHRC1-203ENST00000520337 NWD2Q9ULI1 1742 aa10.16□□□□□ -0.78
CTHRC1-203ENST00000520337 MAP3K5Q99683 1374 aa10.16□□□□□ -0.78
CTHRC1-203ENST00000520337 GNAT3A8MTJ3 354 aa10.16□□□□□ -0.78
CTHRC1-203ENST00000520337 ERVK-9P63128 1117 aa10.16□□□□□ -0.78
CTHRC1-203ENST00000520337 AMOTQ4VCS5 1084 aa10.16□□□□□ -0.78
CTHRC1-203ENST00000520337 KDF1Q8NAX2 398 aaPredicted RBP10.16□□□□□ -0.78
CTHRC1-203ENST00000520337 IL17REQ8NFR9 667 aa10.16□□□□□ -0.78
CTHRC1-203ENST00000520337 PLEKHG2Q9H7P9 1386 aa10.15□□□□□ -0.78
CTHRC1-203ENST00000520337 CHL1O00533 1208 aa10.15□□□□□ -0.78
CTHRC1-203ENST00000520337 GNAI1P63096 354 aa10.15□□□□□ -0.78
CTHRC1-203ENST00000520337 CC2D2BQ6DHV5 1058 aa10.15□□□□□ -0.78
CTHRC1-203ENST00000520337 LARP1Q6PKG0 1096 aaKnown RBP10.15□□□□□ -0.78
CTHRC1-203ENST00000520337 CCDC155Q8N6L0 562 aa10.15□□□□□ -0.78
CTHRC1-203ENST00000520337 NANOS1Q8WY41 292 aaKnown RBP10.15□□□□□ -0.78
CTHRC1-203ENST00000520337 CARD10Q9BWT7 1032 aa10.15□□□□□ -0.78
CTHRC1-203ENST00000520337 MBIPQ9NS73 344 aa10.15□□□□□ -0.78
CTHRC1-203ENST00000520337 BTG4Q9NY30 223 aa10.15□□□□□ -0.78
CTHRC1-203ENST00000520337 JCADQ9P266 1359 aa10.14□□□□□ -0.79
CTHRC1-203ENST00000520337 WNK3Q9BYP7 1800 aa10.14□□□□□ -0.79
CTHRC1-203ENST00000520337 SLC35F4A4IF30 521 aa10.14□□□□□ -0.79
CTHRC1-203ENST00000520337 ATP5J2-PTCD1G3V325 749 aa10.14□□□□□ -0.79
CTHRC1-203ENST00000520337 ADAMTS2O95450 1211 aa10.14□□□□□ -0.79
CTHRC1-203ENST00000520337 EVA1CP58658 441 aa10.14□□□□□ -0.79
CTHRC1-203ENST00000520337 EXOSC9Q06265 439 aaKnown RBP10.14□□□□□ -0.79
CTHRC1-203ENST00000520337 ZNF530Q6P9A1 599 aaPredicted RBP10.14□□□□□ -0.79
CTHRC1-203ENST00000520337 TOM1L2Q6ZVM7 507 aa10.14□□□□□ -0.79
CTHRC1-203ENST00000520337 RAPGEF4Q8WZA2 1011 aa10.14□□□□□ -0.79
CTHRC1-203ENST00000520337 RTF1Q92541 710 aaKnown RBP10.14□□□□□ -0.79
CTHRC1-203ENST00000520337 STRN4Q9NRL3 753 aa10.14□□□□□ -0.79
CTHRC1-203ENST00000520337 LAS1LQ9Y4W2 734 aaKnown RBP10.14□□□□□ -0.79
CTHRC1-203ENST00000520337 CACNA1FO60840 1977 aa10.14□□□□□ -0.79
CTHRC1-203ENST00000520337 CEMIPQ8WUJ3 1361 aa10.14□□□□□ -0.79
CTHRC1-203ENST00000520337 CT47B1P0C2W7 299 aaPredicted RBP10.13□□□□□ -0.79
CTHRC1-203ENST00000520337 TATP17735 454 aaPredicted RBP10.13□□□□□ -0.79
CTHRC1-203ENST00000520337 RRP1P56182 461 aaKnown RBP10.13□□□□□ -0.79
CTHRC1-203ENST00000520337 IRX6P78412 446 aaPredicted RBP10.13□□□□□ -0.79
CTHRC1-203ENST00000520337 AKAP4Q5JQC9 854 aa10.13□□□□□ -0.79
CTHRC1-203ENST00000520337 FOXD4L5Q5VV16 416 aaPredicted RBP10.13□□□□□ -0.79
CTHRC1-203ENST00000520337 LGR6Q9HBX8 967 aa10.13□□□□□ -0.79
CTHRC1-203ENST00000520337 OVOS2A0A0G2JMS6 1433 aa10.13□□□□□ -0.79
CTHRC1-203ENST00000520337 KDM3BQ7LBC6 1761 aa10.13□□□□□ -0.79
CTHRC1-203ENST00000520337 BCAR3O75815 825 aa10.12□□□□□ -0.79
CTHRC1-203ENST00000520337 NEFLP07196 543 aa10.12□□□□□ -0.79
CTHRC1-203ENST00000520337 HSPA1LP34931 641 aa10.12□□□□□ -0.79
CTHRC1-203ENST00000520337 GPC1P35052 558 aa10.12□□□□□ -0.79
CTHRC1-203ENST00000520337 RNF144AP50876 292 aaPredicted RBP10.12□□□□□ -0.79
CTHRC1-203ENST00000520337 RARSP54136 660 aaKnown RBP10.12□□□□□ -0.79
CTHRC1-203ENST00000520337 SUZ12Q15022 739 aaKnown RBP10.12□□□□□ -0.79
CTHRC1-203ENST00000520337 SPG7Q9UQ90 795 aa10.12□□□□□ -0.79
CTHRC1-203ENST00000520337 SLIT2O94813 1529 aa10.12□□□□□ -0.79
CTHRC1-203ENST00000520337 CYP27B1O15528 508 aa10.11□□□□□ -0.79
CTHRC1-203ENST00000520337 RNMTO43148 476 aaKnown RBP10.11□□□□□ -0.79
CTHRC1-203ENST00000520337 VAMP4O75379 141 aa10.11□□□□□ -0.79
CTHRC1-203ENST00000520337 TAF7Q15545 349 aaPredicted RBP10.11□□□□□ -0.79
CTHRC1-203ENST00000520337 MPRIPQ6WCQ1 1025 aa10.11□□□□□ -0.79
CTHRC1-203ENST00000520337 LYSMD3Q7Z3D4 306 aa10.11□□□□□ -0.79
CTHRC1-203ENST00000520337 CYP2U1Q7Z449 544 aa10.11□□□□□ -0.79
CTHRC1-203ENST00000520337 TSPYL6Q8N831 410 aa10.11□□□□□ -0.79
CTHRC1-203ENST00000520337 C8orf58Q8NAV2 365 aa10.11□□□□□ -0.79
CTHRC1-203ENST00000520337 MIS18AQ9NYP9 233 aa10.11□□□□□ -0.79
CTHRC1-203ENST00000520337 TBC1D2BQ9UPU7 963 aa10.11□□□□□ -0.79
CTHRC1-203ENST00000520337 KAT6BQ8WYB5 2073 aa10.11□□□□□ -0.79
CTHRC1-203ENST00000520337 DISP2A7MBM2 1401 aa10.1□□□□□ -0.79
CTHRC1-203ENST00000520337 KDM6AO15550 1401 aaPredicted RBP10.1□□□□□ -0.79
CTHRC1-203ENST00000520337 PLIN1O60240 522 aa10.1□□□□□ -0.79
CTHRC1-203ENST00000520337 IL2RBP14784 551 aa10.1□□□□□ -0.79
CTHRC1-203ENST00000520337 PHKG2P15735 406 aa10.1□□□□□ -0.79
CTHRC1-203ENST00000520337 ITGA6P23229 1130 aa10.1□□□□□ -0.79
CTHRC1-203ENST00000520337 C1orf141Q5JVX7 400 aa10.1□□□□□ -0.79
CTHRC1-203ENST00000520337 BABAM1Q9NWV8 329 aa10.1□□□□□ -0.79
CTHRC1-203ENST00000520337 PCDHB11Q9Y5F2 797 aa10.1□□□□□ -0.79
CTHRC1-203ENST00000520337 LRP6O75581 1613 aa10.1□□□□□ -0.79
CTHRC1-203ENST00000520337 SPATA31A6Q5VVP1 1343 aa10.09□□□□□ -0.79
CTHRC1-203ENST00000520337 ERICH6BQ5W0A0 696 aa10.09□□□□□ -0.79
CTHRC1-203ENST00000520337 ZCRB1Q8TBF4 217 aaKnown RBP10.09□□□□□ -0.79
CTHRC1-203ENST00000520337 SSH1Q8WYL5 1049 aa10.09□□□□□ -0.79
CTHRC1-203ENST00000520337 CEP126Q9P2H0 1117 aa10.09□□□□□ -0.79
CTHRC1-203ENST00000520337 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.09□□□□□ -0.79
CTHRC1-203ENST00000520337 ITGB4P16144 1822 aa10.08□□□□□ -0.8
CTHRC1-203ENST00000520337 TRAK2O60296 914 aa10.08□□□□□ -0.8
CTHRC1-203ENST00000520337 KRT24Q2M2I5 525 aa10.08□□□□□ -0.8
CTHRC1-203ENST00000520337 C20orf194Q5TEA3 1177 aa10.08□□□□□ -0.8
CTHRC1-203ENST00000520337 IFNL2Q8IZJ0 200 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms