RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 HINFPQ9BQA5 517 aa5.99□□□□□ -1.45
PABPC1-212ENST00000519622 NUCKS1Q9H1E3 243 aaKnown RBP5.99□□□□□ -1.45
PABPC1-212ENST00000519622 TSPAN10Q9H1Z9 355 aaPredicted RBP5.99□□□□□ -1.45
PABPC1-212ENST00000519622 RCAN3Q9UKA8 241 aa5.99□□□□□ -1.45
PABPC1-212ENST00000519622 KDM2BQ8NHM5 1336 aa5.99□□□□□ -1.45
PABPC1-212ENST00000519622 TMEM88BA6NKF7 163 aa5.98□□□□□ -1.45
PABPC1-212ENST00000519622 CSB-PGBD3P0DP91 1061 aa5.98□□□□□ -1.45
PABPC1-212ENST00000519622 FOXK2Q01167 660 aa5.98□□□□□ -1.45
PABPC1-212ENST00000519622 SLFN5Q08AF3 891 aa5.98□□□□□ -1.45
PABPC1-212ENST00000519622 FAM69CQ0P6D2 419 aa5.98□□□□□ -1.45
PABPC1-212ENST00000519622 UBAP2LQ14157 1087 aaKnown RBP5.98□□□□□ -1.45
PABPC1-212ENST00000519622 C4orf17Q53FE4 359 aa5.98□□□□□ -1.45
PABPC1-212ENST00000519622 C20orf194Q5TEA3 1177 aa5.98□□□□□ -1.45
PABPC1-212ENST00000519622 CYB5RLQ6IPT4 315 aa5.98□□□□□ -1.45
PABPC1-212ENST00000519622 SLC9A9Q8IVB4 645 aa5.98□□□□□ -1.45
PABPC1-212ENST00000519622 SLC12A5Q9H2X9 1139 aa5.98□□□□□ -1.45
PABPC1-212ENST00000519622 SLAIN2Q9P270 581 aa5.98□□□□□ -1.45
PABPC1-212ENST00000519622 IQSEC3Q9UPP2 1182 aaPredicted RBP5.98□□□□□ -1.45
PABPC1-212ENST00000519622 TRAK1Q9UPV9 953 aa5.98□□□□□ -1.45
PABPC1-212ENST00000519622 KNSTRNQ9Y448 316 aa5.98□□□□□ -1.45
PABPC1-212ENST00000519622 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.98□□□□□ -1.45
PABPC1-212ENST00000519622 RIMS2Q9UQ26 1411 aa5.98□□□□□ -1.45
PABPC1-212ENST00000519622 CNTNAP5Q8WYK1 1306 aa5.98□□□□□ -1.45
PABPC1-212ENST00000519622 NALCNQ8IZF0 1738 aa5.97□□□□□ -1.45
PABPC1-212ENST00000519622 NSD2O96028 1365 aa5.97□□□□□ -1.45
PABPC1-212ENST00000519622 RNF225M0QZC1 329 aaPredicted RBP5.97□□□□□ -1.45
PABPC1-212ENST00000519622 GNASQ5JWF2 1037 aa5.97□□□□□ -1.45
PABPC1-212ENST00000519622 SLC52A1Q9NWF4 448 aa5.97□□□□□ -1.45
PABPC1-212ENST00000519622 SCHIP1Q9P0W5 487 aaPredicted RBP5.97□□□□□ -1.45
PABPC1-212ENST00000519622 LRRC7Q96NW7 1537 aa5.97□□□□□ -1.45
PABPC1-212ENST00000519622 ADAMTS13Q76LX8 1427 aa5.97□□□□□ -1.45
PABPC1-212ENST00000519622 VIRMAQ69YN4 1812 aaKnown RBP5.97□□□□□ -1.45
PABPC1-212ENST00000519622 NKTRP30414 1462 aaKnown RBP5.96□□□□□ -1.45
PABPC1-212ENST00000519622 ATP7BP35670 1465 aa5.96□□□□□ -1.45
PABPC1-212ENST00000519622 PNPLA6Q8IY17 1366 aa5.96□□□□□ -1.45
PABPC1-212ENST00000519622 NINLQ9Y2I6 1382 aa5.96□□□□□ -1.45
PABPC1-212ENST00000519622 C21orf2O43822 256 aa5.96□□□□□ -1.46
PABPC1-212ENST00000519622 PRMT3O60678 531 aa5.96□□□□□ -1.46
PABPC1-212ENST00000519622 BCRP11274 1271 aa5.96□□□□□ -1.46
PABPC1-212ENST00000519622 MX2P20592 715 aa5.96□□□□□ -1.46
PABPC1-212ENST00000519622 MSX1P28360 303 aa5.96□□□□□ -1.46
PABPC1-212ENST00000519622 GTF2E1P29083 439 aaPredicted RBP5.96□□□□□ -1.46
PABPC1-212ENST00000519622 PLA2G4AP47712 749 aa5.96□□□□□ -1.46
PABPC1-212ENST00000519622 MAP3K10Q02779 954 aa5.96□□□□□ -1.46
PABPC1-212ENST00000519622 SUZ12Q15022 739 aaKnown RBP5.96□□□□□ -1.46
PABPC1-212ENST00000519622 SH3PXD2AQ5TCZ1 1133 aa5.96□□□□□ -1.46
PABPC1-212ENST00000519622 C1orf229Q6ZS94 237 aaPredicted RBP5.96□□□□□ -1.46
PABPC1-212ENST00000519622 ZNF295-AS1Q8N0V1 137 aa5.96□□□□□ -1.46
PABPC1-212ENST00000519622 RHBDD1Q8TEB9 315 aa5.96□□□□□ -1.46
PABPC1-212ENST00000519622 ZDHHC1Q8WTX9 485 aa5.96□□□□□ -1.46
PABPC1-212ENST00000519622 SCG3Q8WXD2 468 aaKnown RBP5.96□□□□□ -1.46
PABPC1-212ENST00000519622 PRIMPOLQ96LW4 560 aa5.96□□□□□ -1.46
PABPC1-212ENST00000519622 TRERF1Q96PN7 1200 aa5.96□□□□□ -1.46
PABPC1-212ENST00000519622 CRBNQ96SW2 442 aa5.96□□□□□ -1.46
PABPC1-212ENST00000519622 RUBCNLQ9H714 662 aa5.96□□□□□ -1.46
PABPC1-212ENST00000519622 CABP1Q9NZU7 370 aa5.96□□□□□ -1.46
PABPC1-212ENST00000519622 PARP3Q9Y6F1 533 aa5.96□□□□□ -1.46
PABPC1-212ENST00000519622 CPSF1Q10570 1443 aaKnown RBP5.96□□□□□ -1.46
PABPC1-212ENST00000519622 MARF1Q9Y4F3 1742 aaKnown RBP5.96□□□□□ -1.46
PABPC1-212ENST00000519622 METP08581 1390 aa5.95□□□□□ -1.46
PABPC1-212ENST00000519622 RIMS1Q86UR5 1692 aaKnown RBP5.95□□□□□ -1.46
PABPC1-212ENST00000519622 LOC100996750A0A140TA64 210 aa5.95□□□□□ -1.46
PABPC1-212ENST00000519622 A0A1B0GTH6 734 aa5.95□□□□□ -1.46
PABPC1-212ENST00000519622 CDK2AP1O14519 115 aa5.95□□□□□ -1.46
PABPC1-212ENST00000519622 PLIN1O60240 522 aa5.95□□□□□ -1.46
PABPC1-212ENST00000519622 RGPD1P0DJD0 1748 aa5.95□□□□□ -1.46
PABPC1-212ENST00000519622 SWI5Q1ZZU3 235 aa5.95□□□□□ -1.46
PABPC1-212ENST00000519622 CCDC146Q8IYE0 955 aa5.95□□□□□ -1.46
PABPC1-212ENST00000519622 XRN1Q8IZH2 1706 aaKnown RBP5.95□□□□□ -1.46
PABPC1-212ENST00000519622 SCARF2Q96GP6 870 aaPredicted RBP5.95□□□□□ -1.46
PABPC1-212ENST00000519622 KRTAP4-6Q9BYQ5 205 aa5.95□□□□□ -1.46
PABPC1-212ENST00000519622 ARHGAP23Q9P227 1491 aa5.95□□□□□ -1.46
PABPC1-212ENST00000519622 PEAK1Q9H792 1746 aa5.94□□□□□ -1.46
PABPC1-212ENST00000519622 C2CD2LO14523 706 aa5.94□□□□□ -1.46
PABPC1-212ENST00000519622 PPP1R12BO60237 982 aaPredicted RBP5.94□□□□□ -1.46
PABPC1-212ENST00000519622 GPAT2Q6NUI2 795 aa5.94□□□□□ -1.46
PABPC1-212ENST00000519622 SKAP1Q86WV1 359 aa5.94□□□□□ -1.46
PABPC1-212ENST00000519622 CLP1Q92989 425 aaKnown RBP5.94□□□□□ -1.46
PABPC1-212ENST00000519622 CFHR5Q9BXR6 569 aa5.94□□□□□ -1.46
PABPC1-212ENST00000519622 NIFKQ9BYG3 293 aaKnown RBP5.94□□□□□ -1.46
PABPC1-212ENST00000519622 ENAMQ9NRM1 1142 aa5.94□□□□□ -1.46
PABPC1-212ENST00000519622 USP54Q70EL1 1684 aa5.94□□□□□ -1.46
PABPC1-212ENST00000519622 SLIT1O75093 1534 aa5.94□□□□□ -1.46
PABPC1-212ENST00000519622 ITSN1Q15811 1721 aa5.94□□□□□ -1.46
PABPC1-212ENST00000519622 ATAD2Q6PL18 1390 aa5.93□□□□□ -1.46
PABPC1-212ENST00000519622 FAM135BQ49AJ0 1406 aa5.93□□□□□ -1.46
PABPC1-212ENST00000519622 PTPRUQ92729 1446 aa5.93□□□□□ -1.46
PABPC1-212ENST00000519622 APAF1O14727 1248 aa5.93□□□□□ -1.46
PABPC1-212ENST00000519622 OIP5O43482 229 aa5.93□□□□□ -1.46
PABPC1-212ENST00000519622 ITGB2P05107 769 aa5.93□□□□□ -1.46
PABPC1-212ENST00000519622 WEE1P30291 646 aa5.93□□□□□ -1.46
PABPC1-212ENST00000519622 PSMA6P60900 246 aaKnown RBP5.93□□□□□ -1.46
PABPC1-212ENST00000519622 OCLNQ16625 522 aa5.93□□□□□ -1.46
PABPC1-212ENST00000519622 KANK3Q6NY19 840 aa5.93□□□□□ -1.46
PABPC1-212ENST00000519622 NEDD1Q8NHV4 660 aa5.93□□□□□ -1.46
PABPC1-212ENST00000519622 KLRG1Q96E93 195 aa5.93□□□□□ -1.46
PABPC1-212ENST00000519622 PLEKHF1Q96S99 279 aa5.93□□□□□ -1.46
PABPC1-212ENST00000519622 ANP32EQ9BTT0 268 aa5.93□□□□□ -1.46
PABPC1-212ENST00000519622 NDFIP2Q9NV92 336 aa5.93□□□□□ -1.46
PABPC1-212ENST00000519622 HCN2Q9UL51 889 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms