RNA–Protein interactions for RNA: ENST00000519060.6

MSR1-210, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5

Gene MSR1, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-210ENST00000519060 COL11A2P13942 1736 aaPredicted RBP12.41□□□□□ -0.42
MSR1-210ENST00000519060 GTF2E1P29083 439 aaPredicted RBP12.41□□□□□ -0.42
MSR1-210ENST00000519060 PPP2R1AP30153 589 aa12.41□□□□□ -0.42
MSR1-210ENST00000519060 EPHX2P34913 555 aa12.41□□□□□ -0.42
MSR1-210ENST00000519060 TIAM2Q8IVF5 1701 aa12.41□□□□□ -0.42
MSR1-210ENST00000519060 NGEFQ8N5V2 710 aa12.41□□□□□ -0.42
MSR1-210ENST00000519060 CNTNAP1P78357 1384 aa12.41□□□□□ -0.42
MSR1-210ENST00000519060 SIPA1L3O60292 1781 aaPredicted RBP12.41□□□□□ -0.42
MSR1-210ENST00000519060 IARSP41252 1262 aaKnown RBP12.4□□□□□ -0.42
MSR1-210ENST00000519060 CNTROBQ8N137 903 aa12.4□□□□□ -0.42
MSR1-210ENST00000519060 SCN7AQ01118 1682 aa12.39□□□□□ -0.43
MSR1-210ENST00000519060 KDM4AO75164 1064 aa12.39□□□□□ -0.43
MSR1-210ENST00000519060 MAP1SQ66K74 1059 aaPredicted RBP12.39□□□□□ -0.43
MSR1-210ENST00000519060 NUTM1Q86Y26 1132 aa12.39□□□□□ -0.43
MSR1-210ENST00000519060 PRDM10Q9NQV6 1147 aa12.39□□□□□ -0.43
MSR1-210ENST00000519060 ERVV-1B6SEH8 477 aa12.38□□□□□ -0.43
MSR1-210ENST00000519060 CTCFP49711 727 aaPredicted RBP12.38□□□□□ -0.43
MSR1-210ENST00000519060 CRY2Q49AN0 593 aa12.38□□□□□ -0.43
MSR1-210ENST00000519060 TTLL7Q6ZT98 887 aa12.38□□□□□ -0.43
MSR1-210ENST00000519060 PNMA8AQ86V59 439 aaPredicted RBP12.38□□□□□ -0.43
MSR1-210ENST00000519060 RRP7AQ9Y3A4 280 aaKnown RBP12.38□□□□□ -0.43
MSR1-210ENST00000519060 RNF123Q5XPI4 1314 aa12.37□□□□□ -0.43
MSR1-210ENST00000519060 FUT2Q10981 343 aa12.37□□□□□ -0.43
MSR1-210ENST00000519060 DEFB115Q30KQ5 88 aa12.37□□□□□ -0.43
MSR1-210ENST00000519060 GPC2Q8N158 579 aa12.37□□□□□ -0.43
MSR1-210ENST00000519060 JDP2Q8WYK2 163 aa12.37□□□□□ -0.43
MSR1-210ENST00000519060 PSMD1Q99460 953 aa12.37□□□□□ -0.43
MSR1-210ENST00000519060 PCDHB3Q9Y5E6 796 aa12.37□□□□□ -0.43
MSR1-210ENST00000519060 RASSF10A6NK89 507 aa12.36□□□□□ -0.43
MSR1-210ENST00000519060 HOXA10P31260 410 aaPredicted RBP12.36□□□□□ -0.43
MSR1-210ENST00000519060 LBX1P52954 281 aa12.36□□□□□ -0.43
MSR1-210ENST00000519060 EIF4A1P60842 406 aaKnown RBP12.36□□□□□ -0.43
MSR1-210ENST00000519060 USP46P62068 366 aa12.36□□□□□ -0.43
MSR1-210ENST00000519060 SUSD4Q5VX71 490 aa12.36□□□□□ -0.43
MSR1-210ENST00000519060 CC2D2BQ6DHV5 1058 aa12.36□□□□□ -0.43
MSR1-210ENST00000519060 AIDAQ96BJ3 306 aa12.36□□□□□ -0.43
MSR1-210ENST00000519060 NYXQ9GZU5 481 aa12.36□□□□□ -0.43
MSR1-210ENST00000519060 GJA3Q9Y6H8 435 aa12.36□□□□□ -0.43
MSR1-210ENST00000519060 MAP3K15Q6ZN16 1313 aa12.36□□□□□ -0.43
MSR1-210ENST00000519060 GPTP24298 496 aa12.35□□□□□ -0.43
MSR1-210ENST00000519060 EPS15P42566 896 aa12.35□□□□□ -0.43
MSR1-210ENST00000519060 EIF6P56537 245 aaKnown RBP12.35□□□□□ -0.43
MSR1-210ENST00000519060 FMR1Q06787 632 aaKnown RBP eCLIP12.35□□□□□ -0.43
MSR1-210ENST00000519060 SLC51AQ86UW1 340 aa12.35□□□□□ -0.43
MSR1-210ENST00000519060 PNISRQ8TF01 805 aaKnown RBP12.35□□□□□ -0.43
MSR1-210ENST00000519060 SPIRE2Q8WWL2 714 aa12.35□□□□□ -0.43
MSR1-210ENST00000519060 DDRGK1Q96HY6 314 aa12.35□□□□□ -0.43
MSR1-210ENST00000519060 FAM117AQ9C073 453 aa12.35□□□□□ -0.43
MSR1-210ENST00000519060 SCN4AP35499 1836 aa12.34□□□□□ -0.43
MSR1-210ENST00000519060 CACNA1SQ13698 1873 aa12.34□□□□□ -0.43
MSR1-210ENST00000519060 TCERG1O14776 1098 aaKnown RBP12.34□□□□□ -0.43
MSR1-210ENST00000519060 MYL6BP14649 208 aa12.34□□□□□ -0.43
MSR1-210ENST00000519060 GRIPAP1Q4V328 841 aa12.34□□□□□ -0.43
MSR1-210ENST00000519060 ZNF34Q8IZ26 560 aa12.34□□□□□ -0.43
MSR1-210ENST00000519060 RPGRQ92834 1020 aaKnown RBP12.34□□□□□ -0.43
MSR1-210ENST00000519060 CRAMP1Q96RY5 1269 aa12.34□□□□□ -0.43
MSR1-210ENST00000519060 THUMPD2Q9BTF0 503 aaKnown RBP12.34□□□□□ -0.43
MSR1-210ENST00000519060 ZBTB3Q9H5J0 574 aa12.34□□□□□ -0.43
MSR1-210ENST00000519060 DDX21Q9NR30 783 aaKnown RBP eCLIP12.34□□□□□ -0.43
MSR1-210ENST00000519060 WDR33Q9C0J8 1336 aaKnown RBP12.34□□□□□ -0.43
MSR1-210ENST00000519060 BCORQ6W2J9 1755 aa12.33□□□□□ -0.44
MSR1-210ENST00000519060 ABCC12Q96J65 1359 aa12.33□□□□□ -0.44
MSR1-210ENST00000519060 DIXDC1Q155Q3 683 aa12.33□□□□□ -0.44
MSR1-210ENST00000519060 PUS10Q3MIT2 529 aaKnown RBP12.33□□□□□ -0.44
MSR1-210ENST00000519060 KIF6Q6ZMV9 814 aa12.33□□□□□ -0.44
MSR1-210ENST00000519060 LARGE2Q8N3Y3 721 aa12.33□□□□□ -0.44
MSR1-210ENST00000519060 RBM17Q96I25 401 aaKnown RBP12.33□□□□□ -0.44
MSR1-210ENST00000519060 PLEKHF1Q96S99 279 aa12.33□□□□□ -0.44
MSR1-210ENST00000519060 MTRQ99707 1265 aa12.33□□□□□ -0.44
MSR1-210ENST00000519060 ABT1Q9ULW3 272 aaKnown RBP12.33□□□□□ -0.44
MSR1-210ENST00000519060 SNED1Q8TER0 1413 aa12.33□□□□□ -0.44
MSR1-210ENST00000519060 UBN2Q6ZU65 1347 aa12.33□□□□□ -0.44
MSR1-210ENST00000519060 HSPA8P11142 646 aaKnown RBP12.32□□□□□ -0.44
MSR1-210ENST00000519060 SCNN1DP51172 638 aa12.32□□□□□ -0.44
MSR1-210ENST00000519060 TJAP1Q5JTD0 557 aa12.32□□□□□ -0.44
MSR1-210ENST00000519060 CST9Q5W186 159 aa12.32□□□□□ -0.44
MSR1-210ENST00000519060 BLOC1S3Q6QNY0 202 aa12.32□□□□□ -0.44
MSR1-210ENST00000519060 TBC1D2Q9BYX2 928 aa12.32□□□□□ -0.44
MSR1-210ENST00000519060 ARFGEF2Q9Y6D5 1785 aa12.32□□□□□ -0.44
MSR1-210ENST00000519060 NTSR2O95665 410 aa12.31□□□□□ -0.44
MSR1-210ENST00000519060 NEFMP07197 916 aa12.31□□□□□ -0.44
MSR1-210ENST00000519060 LMOD1P29536 600 aaPredicted RBP12.31□□□□□ -0.44
MSR1-210ENST00000519060 COPS2P61201 443 aa12.31□□□□□ -0.44
MSR1-210ENST00000519060 MAP2K1Q02750 393 aaPredicted RBP12.31□□□□□ -0.44
MSR1-210ENST00000519060 NFE2L2Q16236 605 aa12.31□□□□□ -0.44
MSR1-210ENST00000519060 SLC10A5Q5PT55 438 aa12.31□□□□□ -0.44
MSR1-210ENST00000519060 MORN1Q5T089 497 aa12.31□□□□□ -0.44
MSR1-210ENST00000519060 IL21Q9HBE4 155 aa12.31□□□□□ -0.44
MSR1-210ENST00000519060 COL4A5P29400 1685 aa12.3□□□□□ -0.44
MSR1-210ENST00000519060 TRAF5O00463 557 aa12.3□□□□□ -0.44
MSR1-210ENST00000519060 PPEF1O14829 653 aaPredicted RBP12.3□□□□□ -0.44
MSR1-210ENST00000519060 HOXA2O43364 376 aa12.3□□□□□ -0.44
MSR1-210ENST00000519060 USP50Q70EL3 339 aaPredicted RBP12.3□□□□□ -0.44
MSR1-210ENST00000519060 PPP1R42Q7Z4L9 355 aa12.3□□□□□ -0.44
MSR1-210ENST00000519060 NLRP3Q96P20 1036 aa12.3□□□□□ -0.44
MSR1-210ENST00000519060 NR1I2O75469 434 aa12.29□□□□□ -0.44
MSR1-210ENST00000519060 CXCL9Q07325 125 aa12.29□□□□□ -0.44
MSR1-210ENST00000519060 AOC3Q16853 763 aa12.29□□□□□ -0.44
MSR1-210ENST00000519060 LRP10Q7Z4F1 713 aa12.29□□□□□ -0.44
MSR1-210ENST00000519060 NIM1KQ8IY84 436 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms