RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 GPR108Q9NPR9 543 aa9.98□□□□□ -0.81
CTNNA1-210ENST00000518825 PTPDC1A2A3K4 754 aa9.98□□□□□ -0.81
CTNNA1-210ENST00000518825 EYA2O00167 538 aa9.98□□□□□ -0.81
CTNNA1-210ENST00000518825 GTF2F1P35269 517 aaKnown RBP eCLIP9.98□□□□□ -0.81
CTNNA1-210ENST00000518825 SCARF1Q14162 830 aa9.98□□□□□ -0.81
CTNNA1-210ENST00000518825 DDX19AQ9NUU7 478 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-210ENST00000518825 PDIA3P30101 505 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-210ENST00000518825 ADORA1P30542 326 aa9.97□□□□□ -0.81
CTNNA1-210ENST00000518825 TDRD7Q8NHU6 1098 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-210ENST00000518825 IL15P40933 162 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-210ENST00000518825 IQCB1Q15051 598 aa9.97□□□□□ -0.81
CTNNA1-210ENST00000518825 USP28Q96RU2 1077 aa9.97□□□□□ -0.81
CTNNA1-210ENST00000518825 LLPHQ9BRT6 129 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-210ENST00000518825 RCOR1Q9UKL0 485 aa9.97□□□□□ -0.81
CTNNA1-210ENST00000518825 DCCP43146 1447 aa9.97□□□□□ -0.81
CTNNA1-210ENST00000518825 C11orf57Q6ZUT1 292 aaPredicted RBP9.96□□□□□ -0.81
CTNNA1-210ENST00000518825 ENGASEQ8NFI3 743 aa9.96□□□□□ -0.81
CTNNA1-210ENST00000518825 RNF113AO15541 343 aaKnown RBP9.96□□□□□ -0.81
CTNNA1-210ENST00000518825 HMGN5P82970 282 aaKnown RBP9.96□□□□□ -0.81
CTNNA1-210ENST00000518825 CCDC144BQ3MJ40 725 aa9.96□□□□□ -0.81
CTNNA1-210ENST00000518825 DNTTIP2Q5QJE6 756 aaKnown RBP9.96□□□□□ -0.81
CTNNA1-210ENST00000518825 TNS2Q63HR2 1409 aa9.96□□□□□ -0.81
CTNNA1-210ENST00000518825 NAA16Q6N069 864 aaPredicted RBP9.96□□□□□ -0.81
CTNNA1-210ENST00000518825 DDX60Q8IY21 1712 aaKnown RBP9.96□□□□□ -0.81
CTNNA1-210ENST00000518825 CCDC144CPQ8IYA2 1237 aa9.96□□□□□ -0.81
CTNNA1-210ENST00000518825 CCDC191Q8NCU4 936 aa9.96□□□□□ -0.81
CTNNA1-210ENST00000518825 BICD2Q8TD16 824 aa9.96□□□□□ -0.81
CTNNA1-210ENST00000518825 ZSCAN16Q9H4T2 348 aaPredicted RBP9.96□□□□□ -0.81
CTNNA1-210ENST00000518825 TOGARAM1Q9Y4F4 1720 aa9.96□□□□□ -0.82
CTNNA1-210ENST00000518825 H3BQV1 296 aa9.96□□□□□ -0.82
CTNNA1-210ENST00000518825 ZNF75DP51815 510 aa9.96□□□□□ -0.82
CTNNA1-210ENST00000518825 GUCY1B3Q02153 619 aa9.96□□□□□ -0.82
CTNNA1-210ENST00000518825 IFFO2Q5TF58 517 aa9.96□□□□□ -0.82
CTNNA1-210ENST00000518825 PI16Q6UXB8 463 aa9.96□□□□□ -0.82
CTNNA1-210ENST00000518825 CCDC186Q7Z3E2 898 aa9.96□□□□□ -0.82
CTNNA1-210ENST00000518825 SYNE4Q8N205 404 aa9.96□□□□□ -0.82
CTNNA1-210ENST00000518825 ZCRB1Q8TBF4 217 aaKnown RBP9.96□□□□□ -0.82
CTNNA1-210ENST00000518825 WDR17Q8IZU2 1322 aa9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 GOLGA6L4A6NEF3 574 aa9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 IFIT1P09914 478 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 NKX1-1Q15270 411 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 ERCC4Q92889 916 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 PRIMPOLQ96LW4 560 aa9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 XIRP1Q702N8 1843 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 NEDD4P46934 1319 aa9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 CIAO1O76071 339 aa9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 HMGB1P09429 215 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 ZNF165P49910 485 aa9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 HSP90AB3PQ58FF7 597 aa9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 VSIG10Q8N0Z9 540 aa9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 ISCA1Q9BUE6 129 aa9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 PCDH11XQ9BZA7 1347 aa9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 PCDH11YQ9BZA8 1340 aa9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 ERVV-2B6SEH9 535 aa9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 EVCP57679 992 aa9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 GJB4Q9NTQ9 266 aa9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 DENND2AQ9ULE3 1009 aa9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 HPS5Q9UPZ3 1129 aa9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 SPEF2Q9C093 1822 aa9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 COL5A2P05997 1499 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-210ENST00000518825 CARMIL3Q8ND23 1372 aa9.94□□□□□ -0.82
CTNNA1-210ENST00000518825 OTUD7BQ6GQQ9 843 aa9.94□□□□□ -0.82
CTNNA1-210ENST00000518825 CCAR1Q8IX12 1150 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-210ENST00000518825 CCDC85AQ96PX6 553 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-210ENST00000518825 PUS7LQ9H0K6 701 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-210ENST00000518825 ATG3Q9NT62 314 aa9.94□□□□□ -0.82
CTNNA1-210ENST00000518825 ANTXR2P58335 489 aa9.94□□□□□ -0.82
CTNNA1-210ENST00000518825 ARID5BQ14865 1188 aa9.94□□□□□ -0.82
CTNNA1-210ENST00000518825 ZSCAN25Q6NSZ9 544 aa9.94□□□□□ -0.82
CTNNA1-210ENST00000518825 FBXL16Q8N461 479 aa9.94□□□□□ -0.82
CTNNA1-210ENST00000518825 ZNF274Q96GC6 653 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-210ENST00000518825 NBPF3Q9H094 633 aa9.94□□□□□ -0.82
CTNNA1-210ENST00000518825 CFAP45Q9UL16 551 aa9.94□□□□□ -0.82
CTNNA1-210ENST00000518825 HAND2P61296 217 aa9.94□□□□□ -0.82
CTNNA1-210ENST00000518825 FKBP4Q02790 459 aaKnown RBP eCLIP9.94□□□□□ -0.82
CTNNA1-210ENST00000518825 BRINP3Q76B58 766 aa9.94□□□□□ -0.82
CTNNA1-210ENST00000518825 CACTINQ8WUQ7 758 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-210ENST00000518825 XAGE2Q96GT9 111 aa9.94□□□□□ -0.82
CTNNA1-210ENST00000518825 FGAP02671 866 aa9.93□□□□□ -0.82
CTNNA1-210ENST00000518825 ADRA2BP18089 450 aa9.93□□□□□ -0.82
CTNNA1-210ENST00000518825 FGD1P98174 961 aa9.93□□□□□ -0.82
CTNNA1-210ENST00000518825 DHX40Q8IX18 779 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-210ENST00000518825 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.93□□□□□ -0.82
CTNNA1-210ENST00000518825 FAM89AQ96GI7 184 aa9.93□□□□□ -0.82
CTNNA1-210ENST00000518825 ARID3AQ99856 593 aa9.93□□□□□ -0.82
CTNNA1-210ENST00000518825 TOM1L2Q6ZVM7 507 aa9.93□□□□□ -0.82
CTNNA1-210ENST00000518825 RIC1Q4ADV7 1423 aa9.93□□□□□ -0.82
CTNNA1-210ENST00000518825 AKAP11Q9UKA4 1901 aa9.93□□□□□ -0.82
CTNNA1-210ENST00000518825 RIOK3O14730 519 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-210ENST00000518825 ZAP70P43403 619 aa9.93□□□□□ -0.82
CTNNA1-210ENST00000518825 MB21D2Q8IYB1 491 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-210ENST00000518825 TRIM5Q9C035 493 aa9.93□□□□□ -0.82
CTNNA1-210ENST00000518825 PCDHA7Q9UN72 937 aa9.93□□□□□ -0.82
CTNNA1-210ENST00000518825 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-210ENST00000518825 TCIRG1Q13488 830 aa9.92□□□□□ -0.82
CTNNA1-210ENST00000518825 CADPS2Q86UW7 1296 aa9.92□□□□□ -0.82
CTNNA1-210ENST00000518825 TICAM2Q86XR7 235 aa9.92□□□□□ -0.82
CTNNA1-210ENST00000518825 RAB11FIP4Q86YS3 637 aa9.92□□□□□ -0.82
CTNNA1-210ENST00000518825 ZMYND15Q9H091 742 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms