RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 KIF1AQ12756 1690 aa9.3□□□□□ -0.92
CCDC6-203ENST00000518638 USP17L3A6NCW0 530 aa9.3□□□□□ -0.92
CCDC6-203ENST00000518638 USP17L4A6NCW7 530 aa9.3□□□□□ -0.92
CCDC6-203ENST00000518638 BTBD11A6QL63 1104 aa9.3□□□□□ -0.92
CCDC6-203ENST00000518638 SPATA31C1P0DKV0 1188 aa9.3□□□□□ -0.92
CCDC6-203ENST00000518638 YY1P25490 414 aa9.3□□□□□ -0.92
CCDC6-203ENST00000518638 NCOA4Q13772 614 aa9.3□□□□□ -0.92
CCDC6-203ENST00000518638 EML3Q32P44 896 aa9.3□□□□□ -0.92
CCDC6-203ENST00000518638 C4orf17Q53FE4 359 aa9.3□□□□□ -0.92
CCDC6-203ENST00000518638 TMEM214Q6NUQ4 689 aaKnown RBP9.3□□□□□ -0.92
CCDC6-203ENST00000518638 USP17L2Q6R6M4 530 aa9.3□□□□□ -0.92
CCDC6-203ENST00000518638 USP17L1Q7RTZ2 530 aa9.3□□□□□ -0.92
CCDC6-203ENST00000518638 KRT27Q7Z3Y8 459 aa9.3□□□□□ -0.92
CCDC6-203ENST00000518638 TFIP11Q9UBB9 837 aaKnown RBP9.3□□□□□ -0.92
CCDC6-203ENST00000518638 MAFBQ9Y5Q3 323 aaPredicted RBP9.3□□□□□ -0.92
CCDC6-203ENST00000518638 KIF1BO60333 1816 aa9.29□□□□□ -0.92
CCDC6-203ENST00000518638 ROCK1Q13464 1354 aa9.29□□□□□ -0.92
CCDC6-203ENST00000518638 VPS72Q15906 364 aa9.29□□□□□ -0.92
CCDC6-203ENST00000518638 ESCO1Q5FWF5 840 aa9.29□□□□□ -0.92
CCDC6-203ENST00000518638 ARTNQ5T4W7 220 aa9.29□□□□□ -0.92
CCDC6-203ENST00000518638 FIGNL1Q6PIW4 674 aa9.29□□□□□ -0.92
CCDC6-203ENST00000518638 CRISPLD1Q9H336 500 aa9.29□□□□□ -0.92
CCDC6-203ENST00000518638 C1orf115Q9H7X2 142 aa9.29□□□□□ -0.92
CCDC6-203ENST00000518638 CCDC144AA2RUR9 1427 aa9.29□□□□□ -0.92
CCDC6-203ENST00000518638 ADGRB2O60241 1585 aa9.29□□□□□ -0.92
CCDC6-203ENST00000518638 NUP155O75694 1391 aa9.28□□□□□ -0.92
CCDC6-203ENST00000518638 ADH6P28332 368 aa9.28□□□□□ -0.92
CCDC6-203ENST00000518638 DEPDC4Q8N2C3 294 aa9.28□□□□□ -0.92
CCDC6-203ENST00000518638 NOD1Q9Y239 953 aa9.28□□□□□ -0.92
CCDC6-203ENST00000518638 HRH3Q9Y5N1 445 aa9.28□□□□□ -0.92
CCDC6-203ENST00000518638 DISP2A7MBM2 1401 aa9.28□□□□□ -0.92
CCDC6-203ENST00000518638 ROBO2Q9HCK4 1378 aa9.27□□□□□ -0.93
CCDC6-203ENST00000518638 PLCH1Q4KWH8 1693 aa9.27□□□□□ -0.93
CCDC6-203ENST00000518638 FAM50AQ14320 339 aaKnown RBP9.27□□□□□ -0.93
CCDC6-203ENST00000518638 NKAPLQ5M9Q1 402 aa9.27□□□□□ -0.93
CCDC6-203ENST00000518638 CFAP70Q5T0N1 1121 aa9.27□□□□□ -0.93
CCDC6-203ENST00000518638 NBPF11Q86T75 865 aa9.27□□□□□ -0.93
CCDC6-203ENST00000518638 TRIM11Q96F44 468 aa9.27□□□□□ -0.93
CCDC6-203ENST00000518638 CCDC97Q96F63 343 aaPredicted RBP9.27□□□□□ -0.93
CCDC6-203ENST00000518638 FHDC1Q9C0D6 1143 aaPredicted RBP9.27□□□□□ -0.93
CCDC6-203ENST00000518638 PLVAPQ9BX97 442 aa9.26□□□□□ -0.93
CCDC6-203ENST00000518638 SERPINA10Q9UK55 444 aa9.26□□□□□ -0.93
CCDC6-203ENST00000518638 CCDC9Q9Y3X0 531 aaKnown RBP9.26□□□□□ -0.93
CCDC6-203ENST00000518638 PARD3Q8TEW0 1356 aa9.25□□□□□ -0.93
CCDC6-203ENST00000518638 CLTCL1P53675 1640 aa9.25□□□□□ -0.93
CCDC6-203ENST00000518638 FOXO3O43524 673 aa9.25□□□□□ -0.93
CCDC6-203ENST00000518638 LMOD1P29536 600 aaPredicted RBP9.25□□□□□ -0.93
CCDC6-203ENST00000518638 XAGE2Q96GT9 111 aa9.25□□□□□ -0.93
CCDC6-203ENST00000518638 AVENQ9NQS1 362 aaPredicted RBP9.25□□□□□ -0.93
CCDC6-203ENST00000518638 PCDHGC4Q9Y5F7 938 aa9.25□□□□□ -0.93
CCDC6-203ENST00000518638 SPATA31A3Q5VYP0 1347 aa9.25□□□□□ -0.93
CCDC6-203ENST00000518638 DYRK3O43781 588 aa9.24□□□□□ -0.93
CCDC6-203ENST00000518638 GTF2IP78347 998 aa9.24□□□□□ -0.93
CCDC6-203ENST00000518638 TRIM50Q86XT4 487 aa9.24□□□□□ -0.93
CCDC6-203ENST00000518638 CCDC82Q8N4S0 544 aa9.24□□□□□ -0.93
CCDC6-203ENST00000518638 RHBDD1Q8TEB9 315 aa9.24□□□□□ -0.93
CCDC6-203ENST00000518638 TPSG1Q9NRR2 321 aa9.24□□□□□ -0.93
CCDC6-203ENST00000518638 PCDHGA11Q9Y5H2 935 aa9.24□□□□□ -0.93
CCDC6-203ENST00000518638 RPGRIP1LQ68CZ1 1315 aa9.24□□□□□ -0.93
CCDC6-203ENST00000518638 ARHGEF10O15013 1369 aa9.24□□□□□ -0.93
CCDC6-203ENST00000518638 TNS3Q68CZ2 1445 aa9.23□□□□□ -0.93
CCDC6-203ENST00000518638 SPDYE3A6NKU9 549 aa9.23□□□□□ -0.93
CCDC6-203ENST00000518638 PSME1Q06323 249 aa9.23□□□□□ -0.93
CCDC6-203ENST00000518638 R3HDM1Q15032 1099 aaKnown RBP9.23□□□□□ -0.93
CCDC6-203ENST00000518638 FCHSD1Q86WN1 690 aa9.23□□□□□ -0.93
CCDC6-203ENST00000518638 MKRN1Q9UHC7 482 aaKnown RBP9.23□□□□□ -0.93
CCDC6-203ENST00000518638 NINLQ9Y2I6 1382 aa9.23□□□□□ -0.93
CCDC6-203ENST00000518638 NAIPQ13075 1403 aa9.22□□□□□ -0.93
CCDC6-203ENST00000518638 ABCA3Q99758 1704 aa9.22□□□□□ -0.93
CCDC6-203ENST00000518638 TNS1Q9HBL0 1735 aaKnown RBP9.22□□□□□ -0.93
CCDC6-203ENST00000518638 KRTAP9-9Q9BYP9 154 aa9.22□□□□□ -0.93
CCDC6-203ENST00000518638 KRTAP9-4Q9BYQ2 154 aa9.22□□□□□ -0.93
CCDC6-203ENST00000518638 ZCCHC2Q9C0B9 1178 aaKnown RBP9.22□□□□□ -0.93
CCDC6-203ENST00000518638 DNAAF2Q9NVR5 837 aaKnown RBP9.22□□□□□ -0.93
CCDC6-203ENST00000518638 FMN2Q9NZ56 1722 aa9.22□□□□□ -0.93
CCDC6-203ENST00000518638 ATP1A2P50993 1020 aa9.21□□□□□ -0.94
CCDC6-203ENST00000518638 XPCQ01831 940 aaPredicted RBP9.21□□□□□ -0.94
CCDC6-203ENST00000518638 PRRT3Q5FWE3 981 aa9.21□□□□□ -0.94
CCDC6-203ENST00000518638 FAM182BQ5T319 152 aa9.21□□□□□ -0.94
CCDC6-203ENST00000518638 KLF15Q9UIH9 416 aa9.21□□□□□ -0.94
CCDC6-203ENST00000518638 KNDC1Q76NI1 1749 aa9.21□□□□□ -0.94
CCDC6-203ENST00000518638 NRAPQ86VF7 1730 aa9.21□□□□□ -0.94
CCDC6-203ENST00000518638 SBNO1A3KN83 1393 aa9.21□□□□□ -0.94
CCDC6-203ENST00000518638 TECPR2O15040 1411 aa9.21□□□□□ -0.94
CCDC6-203ENST00000518638 PPLO60437 1756 aa9.2□□□□□ -0.94
CCDC6-203ENST00000518638 APBA3O96018 575 aa9.2□□□□□ -0.94
CCDC6-203ENST00000518638 SCNN1DP51172 638 aa9.2□□□□□ -0.94
CCDC6-203ENST00000518638 NLRP8Q86W28 1048 aa9.2□□□□□ -0.94
CCDC6-203ENST00000518638 PPARGC1BQ86YN6 1023 aaKnown RBP9.2□□□□□ -0.94
CCDC6-203ENST00000518638 ETNK1Q9HBU6 452 aa9.2□□□□□ -0.94
CCDC6-203ENST00000518638 PPP1R1BQ9UD71 204 aaPredicted RBP9.2□□□□□ -0.94
CCDC6-203ENST00000518638 COL14A1Q05707 1796 aaKnown RBP9.19□□□□□ -0.94
CCDC6-203ENST00000518638 ATXN7O15265 892 aaPredicted RBP9.19□□□□□ -0.94
CCDC6-203ENST00000518638 RFX1P22670 979 aa9.19□□□□□ -0.94
CCDC6-203ENST00000518638 GDF10P55107 478 aa9.19□□□□□ -0.94
CCDC6-203ENST00000518638 CLDN10P78369 228 aa9.19□□□□□ -0.94
CCDC6-203ENST00000518638 KRT28Q7Z3Y7 464 aa9.19□□□□□ -0.94
CCDC6-203ENST00000518638 OGFOD1Q8N543 542 aa9.19□□□□□ -0.94
CCDC6-203ENST00000518638 C1orf216Q8TAB5 229 aa9.19□□□□□ -0.94
CCDC6-203ENST00000518638 VRTNQ9H8Y1 702 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms