RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 SKOR1P84550 965 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 KCNH2Q12809 1159 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 CRTC2Q53ET0 693 aaPredicted RBP3.68□□□□□ -1.82
SKP1-204ENST00000517691 NOM1Q5C9Z4 860 aaKnown RBP3.68□□□□□ -1.82
SKP1-204ENST00000517691 PDXDC2PQ6P474 469 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 POTEAQ6S8J7 498 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 UNC5CLQ8IV45 518 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 SREK1Q8WXA9 508 aaKnown RBP3.68□□□□□ -1.82
SKP1-204ENST00000517691 TRPC5Q9UL62 973 aaPredicted RBP3.68□□□□□ -1.82
SKP1-204ENST00000517691 GNEQ9Y223 722 aaKnown RBP3.68□□□□□ -1.82
SKP1-204ENST00000517691 GPSM3Q9Y4H4 160 aa3.68□□□□□ -1.82
SKP1-204ENST00000517691 RGPD8O14715 1765 aaPredicted RBP3.68□□□□□ -1.82
SKP1-204ENST00000517691 CD163L1Q9NR16 1453 aa3.67□□□□□ -1.82
SKP1-204ENST00000517691 SSH2Q76I76 1423 aa3.67□□□□□ -1.82
SKP1-204ENST00000517691 CCDC7Q96M83 1385 aa3.67□□□□□ -1.82
SKP1-204ENST00000517691 USP19O94966 1318 aa3.67□□□□□ -1.82
SKP1-204ENST00000517691 ANKRD62A6NC57 917 aa3.67□□□□□ -1.82
SKP1-204ENST00000517691 TCF3P15923 654 aa3.67□□□□□ -1.82
SKP1-204ENST00000517691 ZNF16P17020 682 aaPredicted RBP3.67□□□□□ -1.82
SKP1-204ENST00000517691 AMPHP49418 695 aa3.67□□□□□ -1.82
SKP1-204ENST00000517691 CC2D1BQ5T0F9 858 aaKnown RBP3.67□□□□□ -1.82
SKP1-204ENST00000517691 GIMAP6Q6P9H5 292 aa3.67□□□□□ -1.82
SKP1-204ENST00000517691 MORC1Q86VD1 984 aa3.67□□□□□ -1.82
SKP1-204ENST00000517691 CCDC24Q8N4L8 307 aa3.67□□□□□ -1.82
SKP1-204ENST00000517691 LTV1Q96GA3 475 aaPredicted RBP3.67□□□□□ -1.82
SKP1-204ENST00000517691 BCCIPQ9P287 314 aaKnown RBP eCLIP3.67□□□□□ -1.82
SKP1-204ENST00000517691 MKRN1Q9UHC7 482 aaKnown RBP3.67□□□□□ -1.82
SKP1-204ENST00000517691 NOVA2Q9UNW9 492 aaKnown RBP3.67□□□□□ -1.82
SKP1-204ENST00000517691 MED1Q15648 1581 aaPredicted RBP3.67□□□□□ -1.82
SKP1-204ENST00000517691 ITSN1Q15811 1721 aa3.67□□□□□ -1.82
SKP1-204ENST00000517691 MARCH6O60337 910 aa3.66□□□□□ -1.82
SKP1-204ENST00000517691 CLSTN1O94985 981 aa3.66□□□□□ -1.82
SKP1-204ENST00000517691 PTK2Q05397 1052 aa3.66□□□□□ -1.82
SKP1-204ENST00000517691 DDX10Q13206 875 aaKnown RBP3.66□□□□□ -1.82
SKP1-204ENST00000517691 PTK7Q13308 1070 aa3.66□□□□□ -1.82
SKP1-204ENST00000517691 RRS1Q15050 365 aaKnown RBP3.66□□□□□ -1.82
SKP1-204ENST00000517691 NOL8Q76FK4 1167 aaKnown RBP3.66□□□□□ -1.82
SKP1-204ENST00000517691 ARHGEF25Q86VW2 580 aa3.66□□□□□ -1.82
SKP1-204ENST00000517691 NEDD1Q8NHV4 660 aa3.66□□□□□ -1.82
SKP1-204ENST00000517691 NUDT12Q9BQG2 462 aa3.66□□□□□ -1.82
SKP1-204ENST00000517691 SHPRHQ149N8 1683 aa3.66□□□□□ -1.82
SKP1-204ENST00000517691 TOPAZ1Q8N9V7 1692 aa3.66□□□□□ -1.82
SKP1-204ENST00000517691 FAM196BA6NMK8 535 aa3.66□□□□□ -1.82
SKP1-204ENST00000517691 RBM6P78332 1123 aaKnown RBP3.66□□□□□ -1.82
SKP1-204ENST00000517691 NCOA4Q13772 614 aa3.66□□□□□ -1.82
SKP1-204ENST00000517691 VPS72Q15906 364 aa3.66□□□□□ -1.82
SKP1-204ENST00000517691 LARP1Q6PKG0 1096 aaKnown RBP3.66□□□□□ -1.82
SKP1-204ENST00000517691 DNAJC14Q6Y2X3 702 aaPredicted RBP3.66□□□□□ -1.82
SKP1-204ENST00000517691 TOM1L2Q6ZVM7 507 aa3.66□□□□□ -1.82
SKP1-204ENST00000517691 ILDR2Q71H61 639 aa3.66□□□□□ -1.82
SKP1-204ENST00000517691 ARMC2Q8NEN0 867 aa3.66□□□□□ -1.82
SKP1-204ENST00000517691 GPKOWQ92917 476 aaPredicted RBP eCLIP3.66□□□□□ -1.82
SKP1-204ENST00000517691 LRRC4BQ9NT99 713 aa3.66□□□□□ -1.82
SKP1-204ENST00000517691 NLRP2Q9NX02 1062 aa3.66□□□□□ -1.82
SKP1-204ENST00000517691 USP31Q70CQ4 1352 aa3.65□□□□□ -1.82
SKP1-204ENST00000517691 USP17L15C9J2P7 530 aa3.65□□□□□ -1.82
SKP1-204ENST00000517691 USP17L10C9JJH3 530 aa3.65□□□□□ -1.82
SKP1-204ENST00000517691 USP17L13C9JLJ4 530 aa3.65□□□□□ -1.82
SKP1-204ENST00000517691 USP17L12C9JPN9 530 aa3.65□□□□□ -1.82
SKP1-204ENST00000517691 USP17L11C9JVI0 530 aa3.65□□□□□ -1.82
SKP1-204ENST00000517691 USP17L21D6R901 530 aa3.65□□□□□ -1.82
SKP1-204ENST00000517691 USP17L18D6R9N7 530 aa3.65□□□□□ -1.82
SKP1-204ENST00000517691 USP17L22D6RA61 530 aa3.65□□□□□ -1.82
SKP1-204ENST00000517691 USP17L17D6RBQ6 530 aa3.65□□□□□ -1.82
SKP1-204ENST00000517691 USP17L19D6RCP7 530 aa3.65□□□□□ -1.82
SKP1-204ENST00000517691 USP17L20D6RJB6 530 aa3.65□□□□□ -1.82
SKP1-204ENST00000517691 RASA1P20936 1047 aa3.65□□□□□ -1.82
SKP1-204ENST00000517691 SSFA2P28290 1259 aa3.65□□□□□ -1.82
SKP1-204ENST00000517691 USP17L24Q0WX57 530 aa3.65□□□□□ -1.82
SKP1-204ENST00000517691 SLFNL1Q499Z3 407 aa3.65□□□□□ -1.82
SKP1-204ENST00000517691 SH3BP5LQ7L8J4 393 aa3.65□□□□□ -1.82
SKP1-204ENST00000517691 RNF135Q8IUD6 432 aa3.65□□□□□ -1.82
SKP1-204ENST00000517691 PLPP7Q8NBV4 271 aa3.65□□□□□ -1.82
SKP1-204ENST00000517691 ADAM32Q8TC27 787 aa3.65□□□□□ -1.82
SKP1-204ENST00000517691 ANKRD24Q8TF21 1146 aa3.65□□□□□ -1.82
SKP1-204ENST00000517691 IP6K1Q92551 441 aa3.65□□□□□ -1.82
SKP1-204ENST00000517691 PCDHB9Q9Y5E1 797 aa3.65□□□□□ -1.82
SKP1-204ENST00000517691 CPDO75976 1380 aa3.65□□□□□ -1.83
SKP1-204ENST00000517691 AATKQ6ZMQ8 1374 aa3.65□□□□□ -1.83
SKP1-204ENST00000517691 TRPM3Q9HCF6 1732 aaPredicted RBP3.65□□□□□ -1.83
SKP1-204ENST00000517691 MAP3K19Q56UN5 1328 aa3.65□□□□□ -1.83
SKP1-204ENST00000517691 BCL9LQ86UU0 1499 aa3.65□□□□□ -1.83
SKP1-204ENST00000517691 COL22A1Q8NFW1 1626 aaPredicted RBP3.65□□□□□ -1.83
SKP1-204ENST00000517691 LOC102724159A0A0B4J2E5 919 aa3.65□□□□□ -1.83
SKP1-204ENST00000517691 DKK1O94907 266 aa3.65□□□□□ -1.83
SKP1-204ENST00000517691 NCLP19338 710 aaKnown RBP3.65□□□□□ -1.83
SKP1-204ENST00000517691 HOXC9P31274 260 aa3.65□□□□□ -1.83
SKP1-204ENST00000517691 MCCD1P59942 119 aaPredicted RBP3.65□□□□□ -1.83
SKP1-204ENST00000517691 PWP2Q15269 919 aaKnown RBP3.65□□□□□ -1.83
SKP1-204ENST00000517691 SV2AQ7L0J3 742 aa3.65□□□□□ -1.83
SKP1-204ENST00000517691 SEPT12Q8IYM1 358 aa3.65□□□□□ -1.83
SKP1-204ENST00000517691 CDCA7Q9BWT1 371 aaPredicted RBP3.65□□□□□ -1.83
SKP1-204ENST00000517691 EMILIN1Q9Y6C2 1016 aa3.65□□□□□ -1.83
SKP1-204ENST00000517691 SPATA31A5Q5VU36 1347 aa3.64□□□□□ -1.83
SKP1-204ENST00000517691 SPATA31A7Q8IWB4 1347 aa3.64□□□□□ -1.83
SKP1-204ENST00000517691 ZBTB7BO15156 539 aaPredicted RBP3.64□□□□□ -1.83
SKP1-204ENST00000517691 LZTS3O60299 673 aaPredicted RBP3.64□□□□□ -1.83
SKP1-204ENST00000517691 CLDN10P78369 228 aa3.64□□□□□ -1.83
SKP1-204ENST00000517691 HSP90AB2PQ58FF8 381 aa3.64□□□□□ -1.83
SKP1-204ENST00000517691 TCP11L2Q8N4U5 519 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms