RNA–Protein interactions for RNA: ENST00000517624.1

VIRMA-203, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 3

Gene VIRMA, Length 497 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-203ENST00000517624 FOXO4P98177 505 aa11.4□□□□□ -0.58
VIRMA-203ENST00000517624 MKRN3Q13064 507 aaKnown RBP11.4□□□□□ -0.58
VIRMA-203ENST00000517624 RABL6Q3YEC7 729 aaPredicted RBP11.4□□□□□ -0.58
VIRMA-203ENST00000517624 EPHA10Q5JZY3 1008 aa11.4□□□□□ -0.58
VIRMA-203ENST00000517624 PRR5LQ6MZQ0 368 aa11.4□□□□□ -0.58
VIRMA-203ENST00000517624 NUTM1Q86Y26 1132 aa11.4□□□□□ -0.58
VIRMA-203ENST00000517624 ERC1Q8IUD2 1116 aa11.4□□□□□ -0.58
VIRMA-203ENST00000517624 CNBD1Q8NA66 436 aa11.4□□□□□ -0.58
VIRMA-203ENST00000517624 PARP3Q9Y6F1 533 aa11.4□□□□□ -0.58
VIRMA-203ENST00000517624 AK9Q5TCS8 1911 aa11.4□□□□□ -0.58
VIRMA-203ENST00000517624 SRGAP3O43295 1099 aa11.39□□□□□ -0.59
VIRMA-203ENST00000517624 PDE8AO60658 829 aa11.39□□□□□ -0.59
VIRMA-203ENST00000517624 SURF6O75683 361 aaKnown RBP11.39□□□□□ -0.59
VIRMA-203ENST00000517624 ZBTB7AO95365 584 aa11.39□□□□□ -0.59
VIRMA-203ENST00000517624 CSF1RP07333 972 aa11.39□□□□□ -0.59
VIRMA-203ENST00000517624 HCLS1P14317 486 aaPredicted RBP11.39□□□□□ -0.59
VIRMA-203ENST00000517624 HSP90B1P14625 803 aaKnown RBP11.39□□□□□ -0.59
VIRMA-203ENST00000517624 RIC1Q4ADV7 1423 aa11.39□□□□□ -0.59
VIRMA-203ENST00000517624 BICC1Q9H694 974 aaKnown RBP11.39□□□□□ -0.59
VIRMA-203ENST00000517624 NRXN2Q9P2S2 1712 aa11.39□□□□□ -0.59
VIRMA-203ENST00000517624 ABCC12Q96J65 1359 aa11.39□□□□□ -0.59
VIRMA-203ENST00000517624 FSD2A1L4K1 749 aa11.38□□□□□ -0.59
VIRMA-203ENST00000517624 TRIM6-TRIM34B2RNG4 842 aa11.38□□□□□ -0.59
VIRMA-203ENST00000517624 HOXB3P14651 431 aaPredicted RBP11.38□□□□□ -0.59
VIRMA-203ENST00000517624 GTF2E1P29083 439 aaPredicted RBP11.38□□□□□ -0.59
VIRMA-203ENST00000517624 DPY19L2Q6NUT2 758 aa11.38□□□□□ -0.59
VIRMA-203ENST00000517624 CNTROBQ8N137 903 aa11.38□□□□□ -0.59
VIRMA-203ENST00000517624 TTLL11Q8NHH1 800 aa11.38□□□□□ -0.59
VIRMA-203ENST00000517624 DDX60Q8IY21 1712 aaKnown RBP11.38□□□□□ -0.59
VIRMA-203ENST00000517624 KLRG2A4D1S0 409 aaPredicted RBP11.37□□□□□ -0.59
VIRMA-203ENST00000517624 GOLGA6L3A6NEY3 463 aa11.37□□□□□ -0.59
VIRMA-203ENST00000517624 CYP2E1P05181 493 aaPredicted RBP11.37□□□□□ -0.59
VIRMA-203ENST00000517624 CTSWP56202 376 aa11.37□□□□□ -0.59
VIRMA-203ENST00000517624 ST5P78524 1137 aa11.37□□□□□ -0.59
VIRMA-203ENST00000517624 SF3B3Q15393 1217 aaKnown RBP11.37□□□□□ -0.59
VIRMA-203ENST00000517624 LMBR1LQ6UX01 489 aa11.37□□□□□ -0.59
VIRMA-203ENST00000517624 CCDC24Q8N4L8 307 aa11.37□□□□□ -0.59
VIRMA-203ENST00000517624 PI4K2BQ8TCG2 481 aa11.37□□□□□ -0.59
VIRMA-203ENST00000517624 GPATCH3Q96I76 525 aa11.37□□□□□ -0.59
VIRMA-203ENST00000517624 LAMB2P55268 1798 aa11.36□□□□□ -0.59
VIRMA-203ENST00000517624 NPHP1O15259 732 aa11.36□□□□□ -0.59
VIRMA-203ENST00000517624 GLRX3O76003 335 aaKnown RBP11.36□□□□□ -0.59
VIRMA-203ENST00000517624 PTGER2P43116 358 aa11.36□□□□□ -0.59
VIRMA-203ENST00000517624 CLASRPQ8N2M8 674 aaKnown RBP11.36□□□□□ -0.59
VIRMA-203ENST00000517624 RILPL2Q969X0 211 aa11.36□□□□□ -0.59
VIRMA-203ENST00000517624 NLRP3Q96P20 1036 aa11.36□□□□□ -0.59
VIRMA-203ENST00000517624 BRIP1Q9BX63 1249 aa11.36□□□□□ -0.59
VIRMA-203ENST00000517624 MYH3P11055 1940 aa11.35□□□□□ -0.59
VIRMA-203ENST00000517624 POLD1P28340 1107 aa11.35□□□□□ -0.59
VIRMA-203ENST00000517624 CRY2Q49AN0 593 aa11.35□□□□□ -0.59
VIRMA-203ENST00000517624 IL1RAPL2Q9NP60 686 aa11.35□□□□□ -0.59
VIRMA-203ENST00000517624 ANO2Q9NQ90 1003 aa11.35□□□□□ -0.59
VIRMA-203ENST00000517624 RTL9Q8NET4 1388 aa11.35□□□□□ -0.59
VIRMA-203ENST00000517624 SRCAPQ6ZRS2 3230 aa11.35□□□□□ -0.59
VIRMA-203ENST00000517624 RAD50Q92878 1312 aa11.35□□□□□ -0.59
VIRMA-203ENST00000517624 RFX5P48382 616 aaPredicted RBP11.34□□□□□ -0.59
VIRMA-203ENST00000517624 MRE11P49959 708 aa11.34□□□□□ -0.59
VIRMA-203ENST00000517624 OS9Q13438 667 aaPredicted RBP11.34□□□□□ -0.59
VIRMA-203ENST00000517624 CUL4AQ13619 759 aa11.34□□□□□ -0.59
VIRMA-203ENST00000517624 CCDC152Q4G0S7 254 aa11.34□□□□□ -0.59
VIRMA-203ENST00000517624 TSHZ3Q63HK5 1081 aa11.34□□□□□ -0.59
VIRMA-203ENST00000517624 RUFY2Q8WXA3 655 aa11.34□□□□□ -0.59
VIRMA-203ENST00000517624 INTS4Q96HW7 963 aaKnown RBP11.34□□□□□ -0.59
VIRMA-203ENST00000517624 GREM2Q9H772 168 aa11.34□□□□□ -0.59
VIRMA-203ENST00000517624 C10orf71Q711Q0 1435 aa11.34□□□□□ -0.59
VIRMA-203ENST00000517624 ANKRD31Q8N7Z5 1873 aa11.34□□□□□ -0.59
VIRMA-203ENST00000517624 TNRC6CQ9HCJ0 1690 aaKnown RBP11.33□□□□□ -0.6
VIRMA-203ENST00000517624 SGSM2O43147 1006 aa11.33□□□□□ -0.6
VIRMA-203ENST00000517624 BAG4O95429 457 aaKnown RBP11.33□□□□□ -0.6
VIRMA-203ENST00000517624 HOXA10P31260 410 aaPredicted RBP11.33□□□□□ -0.6
VIRMA-203ENST00000517624 HSPA4P34932 840 aa11.33□□□□□ -0.6
VIRMA-203ENST00000517624 PDE6BP35913 854 aa11.33□□□□□ -0.6
VIRMA-203ENST00000517624 CCDC85AQ96PX6 553 aaPredicted RBP11.33□□□□□ -0.6
VIRMA-203ENST00000517624 SPON1Q9HCB6 807 aa11.33□□□□□ -0.6
VIRMA-203ENST00000517624 COPRSQ9NQ92 184 aa11.33□□□□□ -0.6
VIRMA-203ENST00000517624 HIP1O00291 1037 aa11.32□□□□□ -0.6
VIRMA-203ENST00000517624 ITGA6P23229 1130 aa11.32□□□□□ -0.6
VIRMA-203ENST00000517624 NEK4P51957 841 aa11.32□□□□□ -0.6
VIRMA-203ENST00000517624 PTPN12Q05209 780 aaKnown RBP11.32□□□□□ -0.6
VIRMA-203ENST00000517624 IFIT5Q13325 482 aaKnown RBP11.32□□□□□ -0.6
VIRMA-203ENST00000517624 KLHL40Q2TBA0 621 aa11.32□□□□□ -0.6
VIRMA-203ENST00000517624 RNF166Q96A37 237 aaPredicted RBP11.32□□□□□ -0.6
VIRMA-203ENST00000517624 ECHDC1Q9NTX5 307 aa11.32□□□□□ -0.6
VIRMA-203ENST00000517624 BRPF3Q9ULD4 1205 aa11.32□□□□□ -0.6
VIRMA-203ENST00000517624 CHMP3Q9Y3E7 222 aa11.32□□□□□ -0.6
VIRMA-203ENST00000517624 ANKRD18BA2A2Z9 1011 aa11.31□□□□□ -0.6
VIRMA-203ENST00000517624 IFIT2P09913 472 aaKnown RBP11.31□□□□□ -0.6
VIRMA-203ENST00000517624 SRGNP10124 158 aa11.31□□□□□ -0.6
VIRMA-203ENST00000517624 CCDC57Q2TAC2 916 aa11.31□□□□□ -0.6
VIRMA-203ENST00000517624 ZNF467Q7Z7K2 595 aaPredicted RBP11.31□□□□□ -0.6
VIRMA-203ENST00000517624 TMX3Q96JJ7 454 aa11.31□□□□□ -0.6
VIRMA-203ENST00000517624 SEC31BQ9NQW1 1179 aa11.31□□□□□ -0.6
VIRMA-203ENST00000517624 KIF13BQ9NQT8 1826 aa11.3□□□□□ -0.6
VIRMA-203ENST00000517624 RFX7Q2KHR2 1363 aa11.3□□□□□ -0.6
VIRMA-203ENST00000517624 H0YIN7 160 aa11.3□□□□□ -0.6
VIRMA-203ENST00000517624 HOXB1P14653 301 aaPredicted RBP11.3□□□□□ -0.6
VIRMA-203ENST00000517624 NPR1P16066 1061 aa11.3□□□□□ -0.6
VIRMA-203ENST00000517624 PSEN1P49768 467 aa11.3□□□□□ -0.6
VIRMA-203ENST00000517624 G3BP1Q13283 466 aaKnown RBP eCLIP11.3□□□□□ -0.64e-6■□□□□ 9.4
VIRMA-203ENST00000517624 KIAA1211Q6ZU35 1233 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms