RNA–Protein interactions for RNA: ENST00000515869.1

ERCC6-208, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 2 BASIC

Gene ERCC6, Length 3,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-208ENST00000515869 USP28Q96RU2 1077 aa10.17□□□□□ -0.78
ERCC6-208ENST00000515869 ZSCAN16Q9H4T2 348 aaPredicted RBP10.17□□□□□ -0.78
ERCC6-208ENST00000515869 BABAM1Q9NWV8 329 aa10.17□□□□□ -0.78
ERCC6-208ENST00000515869 HMG20BQ9P0W2 317 aa10.17□□□□□ -0.78
ERCC6-208ENST00000515869 HDAC5Q9UQL6 1122 aa10.17□□□□□ -0.78
ERCC6-208ENST00000515869 CDK11BP21127 795 aaKnown RBP10.17□□□□□ -0.78
ERCC6-208ENST00000515869 MTX1Q13505 466 aa10.17□□□□□ -0.78
ERCC6-208ENST00000515869 KRT32Q14532 448 aa10.17□□□□□ -0.78
ERCC6-208ENST00000515869 ISM2Q6H9L7 571 aa10.17□□□□□ -0.78
ERCC6-208ENST00000515869 CHST3Q7LGC8 479 aa10.17□□□□□ -0.78
ERCC6-208ENST00000515869 NCOA5Q9HCD5 579 aaKnown RBP10.17□□□□□ -0.78
ERCC6-208ENST00000515869 WWC3Q9ULE0 1092 aa10.17□□□□□ -0.78
ERCC6-208ENST00000515869 ADGRL3Q9HAR2 1447 aa10.17□□□□□ -0.78
ERCC6-208ENST00000515869 XRN1Q8IZH2 1706 aaKnown RBP10.17□□□□□ -0.78
ERCC6-208ENST00000515869 CDC25BP30305 580 aa10.17□□□□□ -0.78
ERCC6-208ENST00000515869 CCZ1BP86790 482 aa10.17□□□□□ -0.78
ERCC6-208ENST00000515869 CCZ1P86791 482 aaPredicted RBP10.17□□□□□ -0.78
ERCC6-208ENST00000515869 APOBRQ0VD83 1088 aa10.17□□□□□ -0.78
ERCC6-208ENST00000515869 DDX46Q7L014 1031 aaKnown RBP10.17□□□□□ -0.78
ERCC6-208ENST00000515869 UBE3BQ7Z3V4 1068 aa10.17□□□□□ -0.78
ERCC6-208ENST00000515869 TMC6Q7Z403 805 aa10.17□□□□□ -0.78
ERCC6-208ENST00000515869 ZCRB1Q8TBF4 217 aaKnown RBP10.17□□□□□ -0.78
ERCC6-208ENST00000515869 PXDNLA1KZ92 1463 aa10.17□□□□□ -0.78
ERCC6-208ENST00000515869 A0A1B0GVL5 298 aa10.16□□□□□ -0.78
ERCC6-208ENST00000515869 CTAGE5O15320 804 aa10.16□□□□□ -0.78
ERCC6-208ENST00000515869 IFNL2Q8IZJ0 200 aa10.16□□□□□ -0.78
ERCC6-208ENST00000515869 ALDH1L1O75891 902 aa10.16□□□□□ -0.78
ERCC6-208ENST00000515869 RBM6P78332 1123 aaKnown RBP10.16□□□□□ -0.78
ERCC6-208ENST00000515869 TAF3Q5VWG9 929 aa10.16□□□□□ -0.78
ERCC6-208ENST00000515869 NYAP1Q6ZVC0 841 aa10.16□□□□□ -0.78
ERCC6-208ENST00000515869 NAT10Q9H0A0 1025 aaKnown RBP10.16□□□□□ -0.78
ERCC6-208ENST00000515869 TBC1D2BQ9UPU7 963 aa10.16□□□□□ -0.78
ERCC6-208ENST00000515869 ERBB3P21860 1342 aa10.16□□□□□ -0.78
ERCC6-208ENST00000515869 PTPDC1A2A3K4 754 aa10.16□□□□□ -0.78
ERCC6-208ENST00000515869 CCDC66A2RUB6 948 aa10.16□□□□□ -0.78
ERCC6-208ENST00000515869 CYP27B1O15528 508 aa10.16□□□□□ -0.78
ERCC6-208ENST00000515869 NEXNQ0ZGT2 675 aa10.16□□□□□ -0.78
ERCC6-208ENST00000515869 AKAP4Q5JQC9 854 aa10.16□□□□□ -0.78
ERCC6-208ENST00000515869 SARM1Q6SZW1 724 aa10.16□□□□□ -0.78
ERCC6-208ENST00000515869 DHX40Q8IX18 779 aaKnown RBP10.16□□□□□ -0.78
ERCC6-208ENST00000515869 CYP21A2P08686 494 aa10.15□□□□□ -0.78
ERCC6-208ENST00000515869 FAM98CQ17RN3 349 aaKnown RBP10.15□□□□□ -0.78
ERCC6-208ENST00000515869 SLFNL1Q499Z3 407 aa10.15□□□□□ -0.78
ERCC6-208ENST00000515869 KAZALD1Q96I82 304 aa10.15□□□□□ -0.78
ERCC6-208ENST00000515869 IFNKQ9P0W0 207 aa10.15□□□□□ -0.78
ERCC6-208ENST00000515869 POLR3DP05423 398 aaPredicted RBP10.15□□□□□ -0.78
ERCC6-208ENST00000515869 SFPQP23246 707 aaKnown RBP eCLIP10.15□□□□□ -0.78
ERCC6-208ENST00000515869 OTUD7BQ6GQQ9 843 aa10.15□□□□□ -0.78
ERCC6-208ENST00000515869 FAM177A1Q8N128 213 aaPredicted RBP10.15□□□□□ -0.78
ERCC6-208ENST00000515869 LINS1Q8NG48 757 aa10.15□□□□□ -0.78
ERCC6-208ENST00000515869 ZNF396Q96N95 335 aaPredicted RBP10.15□□□□□ -0.78
ERCC6-208ENST00000515869 AKAP12Q02952 1782 aa10.15□□□□□ -0.79
ERCC6-208ENST00000515869 NRDCO43847 1150 aa10.14□□□□□ -0.79
ERCC6-208ENST00000515869 DDX58O95786 925 aaKnown RBP10.14□□□□□ -0.79
ERCC6-208ENST00000515869 FAM160A1Q05DH4 1040 aa10.14□□□□□ -0.79
ERCC6-208ENST00000515869 ZNF790Q6PG37 636 aa10.14□□□□□ -0.79
ERCC6-208ENST00000515869 STK11IPQ8N1F8 1099 aa10.14□□□□□ -0.79
ERCC6-208ENST00000515869 LRRN4CLQ8ND94 238 aa10.14□□□□□ -0.79
ERCC6-208ENST00000515869 ASAP1Q9ULH1 1129 aa10.14□□□□□ -0.79
ERCC6-208ENST00000515869 TECPR2O15040 1411 aa10.14□□□□□ -0.79
ERCC6-208ENST00000515869 GSDMDP57764 484 aa10.14□□□□□ -0.79
ERCC6-208ENST00000515869 NOL10Q9BSC4 688 aaKnown RBP10.14□□□□□ -0.79
ERCC6-208ENST00000515869 XPO4Q9C0E2 1151 aaKnown RBP10.14□□□□□ -0.79
ERCC6-208ENST00000515869 TMOD3Q9NYL9 352 aa10.14□□□□□ -0.79
ERCC6-208ENST00000515869 RCOR1Q9UKL0 485 aa10.14□□□□□ -0.79
ERCC6-208ENST00000515869 VGLL3A8MV65 326 aa10.14□□□□□ -0.79
ERCC6-208ENST00000515869 POLR3GO15318 223 aaPredicted RBP10.14□□□□□ -0.79
ERCC6-208ENST00000515869 HOXB7P09629 217 aa10.14□□□□□ -0.79
ERCC6-208ENST00000515869 GTF2E1P29083 439 aaPredicted RBP10.14□□□□□ -0.79
ERCC6-208ENST00000515869 STK38Q15208 465 aa10.14□□□□□ -0.79
ERCC6-208ENST00000515869 DPCR1Q3MIW9 517 aa10.14□□□□□ -0.79
ERCC6-208ENST00000515869 ARHGAP29Q52LW3 1261 aa10.14□□□□□ -0.79
ERCC6-208ENST00000515869 NSUN7Q8NE18 718 aaKnown RBP10.14□□□□□ -0.79
ERCC6-208ENST00000515869 CHMP4CQ96CF2 233 aa10.14□□□□□ -0.79
ERCC6-208ENST00000515869 U3KPZ7 1027 aaPredicted RBP10.14□□□□□ -0.79
ERCC6-208ENST00000515869 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.14□□□□□ -0.79
ERCC6-208ENST00000515869 FAM208AQ9UK61 1670 aaKnown RBP10.14□□□□□ -0.79
ERCC6-208ENST00000515869 RGPD1P0DJD0 1748 aa10.13□□□□□ -0.79
ERCC6-208ENST00000515869 GIGYF1O75420 1035 aaPredicted RBP10.13□□□□□ -0.79
ERCC6-208ENST00000515869 LMOD1P29536 600 aaPredicted RBP10.13□□□□□ -0.79
ERCC6-208ENST00000515869 ADD1P35611 737 aaKnown RBP10.13□□□□□ -0.79
ERCC6-208ENST00000515869 TFCP2Q12800 502 aa10.13□□□□□ -0.79
ERCC6-208ENST00000515869 AMOTQ4VCS5 1084 aa10.13□□□□□ -0.79
ERCC6-208ENST00000515869 RAB11FIP4Q86YS3 637 aa10.13□□□□□ -0.79
ERCC6-208ENST00000515869 DNAI1Q9UI46 699 aa10.13□□□□□ -0.79
ERCC6-208ENST00000515869 DBNLQ9UJU6 430 aaKnown RBP10.13□□□□□ -0.79
ERCC6-208ENST00000515869 DIP2AQ14689 1571 aa10.13□□□□□ -0.79
ERCC6-208ENST00000515869 MED23Q9ULK4 1368 aa10.13□□□□□ -0.79
ERCC6-208ENST00000515869 BMS1Q14692 1282 aaKnown RBP10.13□□□□□ -0.79
ERCC6-208ENST00000515869 PTPN21Q16825 1174 aa10.13□□□□□ -0.79
ERCC6-208ENST00000515869 E4F1Q66K89 784 aaPredicted RBP10.13□□□□□ -0.79
ERCC6-208ENST00000515869 ZNF446Q9NWS9 450 aa10.13□□□□□ -0.79
ERCC6-208ENST00000515869 NRXN3Q9Y4C0 1643 aa10.13□□□□□ -0.79
ERCC6-208ENST00000515869 A0A087WZG4 1122 aa10.13□□□□□ -0.79
ERCC6-208ENST00000515869 SETD1AO15047 1707 aaKnown RBP10.13□□□□□ -0.79
ERCC6-208ENST00000515869 MCMDC2Q4G0Z9 681 aa10.13□□□□□ -0.79
ERCC6-208ENST00000515869 EPHA10Q5JZY3 1008 aa10.13□□□□□ -0.79
ERCC6-208ENST00000515869 MRPS27Q92552 414 aaKnown RBP10.13□□□□□ -0.79
ERCC6-208ENST00000515869 PPP1R13BQ96KQ4 1090 aa10.13□□□□□ -0.79
ERCC6-208ENST00000515869 DBNDD2Q9BQY9 259 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms