RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 NECTIN1Q15223 517 aa24.19■■□□□ 1.46
TRIO-223ENST00000515710 SNX14Q9Y5W7 946 aa24.19■■□□□ 1.46
TRIO-223ENST00000515710 ZNF589Q86UQ0 364 aaPredicted RBP24.18■■□□□ 1.46
TRIO-223ENST00000515710 COL4A1P02462 1669 aa24.18■■□□□ 1.46
TRIO-223ENST00000515710 NLGN1Q8N2Q7 840 aa24.18■■□□□ 1.46
TRIO-223ENST00000515710 ANKRD2Q9GZV1 360 aa24.18■■□□□ 1.46
TRIO-223ENST00000515710 RBM8AQ9Y5S9 174 aaKnown RBP24.18■■□□□ 1.46
TRIO-223ENST00000515710 KCNJ4P48050 445 aa24.17■■□□□ 1.46
TRIO-223ENST00000515710 MCM2P49736 904 aa24.17■■□□□ 1.46
TRIO-223ENST00000515710 NEK4P51957 841 aa24.17■■□□□ 1.46
TRIO-223ENST00000515710 ZSCAN25Q6NSZ9 544 aa24.17■■□□□ 1.46
TRIO-223ENST00000515710 COL23A1Q86Y22 540 aaPredicted RBP24.16■■□□□ 1.46
TRIO-223ENST00000515710 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.16■■□□□ 1.46
TRIO-223ENST00000515710 SNAP23O00161 211 aa24.16■■□□□ 1.46
TRIO-223ENST00000515710 POLRMTO00411 1230 aaKnown RBP24.16■■□□□ 1.46
TRIO-223ENST00000515710 ZKSCAN1P17029 563 aaPredicted RBP24.15■■□□□ 1.46
TRIO-223ENST00000515710 GRAPQ13588 217 aa24.15■■□□□ 1.46
TRIO-223ENST00000515710 RNF20Q5VTR2 975 aa24.15■■□□□ 1.46
TRIO-223ENST00000515710 PRPF40BQ6NWY9 871 aaKnown RBP24.15■■□□□ 1.46
TRIO-223ENST00000515710 GRAPLQ8TC17 118 aaPredicted RBP24.15■■□□□ 1.46
TRIO-223ENST00000515710 SEC62Q99442 399 aaKnown RBP24.15■■□□□ 1.46
TRIO-223ENST00000515710 HMG20BQ9P0W2 317 aa24.15■■□□□ 1.46
TRIO-223ENST00000515710 CYP2E1P05181 493 aaPredicted RBP24.14■■□□□ 1.46
TRIO-223ENST00000515710 DDR1Q08345 913 aa24.14■■□□□ 1.46
TRIO-223ENST00000515710 PI16Q6UXB8 463 aa24.14■■□□□ 1.46
TRIO-223ENST00000515710 RASEFQ8IZ41 740 aa24.14■■□□□ 1.46
TRIO-223ENST00000515710 SLKQ9H2G2 1235 aaPredicted RBP24.14■■□□□ 1.46
TRIO-223ENST00000515710 TNRC6CQ9HCJ0 1690 aaKnown RBP24.14■■□□□ 1.45
TRIO-223ENST00000515710 CHGBP05060 677 aa24.14■■□□□ 1.45
TRIO-223ENST00000515710 CREB3L3Q68CJ9 461 aa24.14■■□□□ 1.45
TRIO-223ENST00000515710 SPATA5Q8NB90 893 aa24.14■■□□□ 1.45
TRIO-223ENST00000515710 U3KPZ7 1027 aaPredicted RBP24.14■■□□□ 1.45
TRIO-223ENST00000515710 AKAP11Q9UKA4 1901 aa24.13■■□□□ 1.45
TRIO-223ENST00000515710 CRY2Q49AN0 593 aa24.13■■□□□ 1.45
TRIO-223ENST00000515710 TM6SF1Q9BZW5 370 aa24.13■■□□□ 1.45
TRIO-223ENST00000515710 BCAMP50895 628 aa24.12■■□□□ 1.45
TRIO-223ENST00000515710 SPRYD3Q8NCJ5 442 aa24.12■■□□□ 1.45
TRIO-223ENST00000515710 APPBP2Q92624 585 aa24.12■■□□□ 1.45
TRIO-223ENST00000515710 RPGRQ92834 1020 aaKnown RBP24.12■■□□□ 1.45
TRIO-223ENST00000515710 GNL3LQ9NVN8 582 aaKnown RBP24.12■■□□□ 1.45
TRIO-223ENST00000515710 SLC27A2O14975 620 aa24.12■■□□□ 1.45
TRIO-223ENST00000515710 CAVIN4Q5BKX8 364 aa24.12■■□□□ 1.45
TRIO-223ENST00000515710 CCDC129Q6ZRS4 1044 aa24.12■■□□□ 1.45
TRIO-223ENST00000515710 DSCC1Q9BVC3 393 aa24.12■■□□□ 1.45
TRIO-223ENST00000515710 A0A1B0GUL6 1792 aa24.11■■□□□ 1.45
TRIO-223ENST00000515710 TAF1P21675 1872 aa24.11■■□□□ 1.45
TRIO-223ENST00000515710 RBM17Q96I25 401 aaKnown RBP24.11■■□□□ 1.45
TRIO-223ENST00000515710 CAMKK2Q96RR4 588 aa24.11■■□□□ 1.45
TRIO-223ENST00000515710 ZNF804BA4D1E1 1349 aa24.1■■□□□ 1.45
TRIO-223ENST00000515710 HSP90AA1P07900 732 aaKnown RBP24.1■■□□□ 1.45
TRIO-223ENST00000515710 RASGRF1Q13972 1273 aa24.1■■□□□ 1.45
TRIO-223ENST00000515710 TSGA10IPQ3SY00 556 aa24.1■■□□□ 1.45
TRIO-223ENST00000515710 PIH1D3Q9NQM4 214 aaKnown RBP24.1■■□□□ 1.45
TRIO-223ENST00000515710 MAST3O60307 1309 aa24.1■■□□□ 1.45
TRIO-223ENST00000515710 KLRG2A4D1S0 409 aaPredicted RBP24.1■■□□□ 1.45
TRIO-223ENST00000515710 ADD2P35612 726 aa24.1■■□□□ 1.45
TRIO-223ENST00000515710 WASHC4Q2M389 1173 aa24.1■■□□□ 1.45
TRIO-223ENST00000515710 OSBP2Q969R2 916 aa24.1■■□□□ 1.45
TRIO-223ENST00000515710 PNPLA7Q6ZV29 1317 aa24.09■■□□□ 1.45
TRIO-223ENST00000515710 PSMA5P28066 241 aa24.09■■□□□ 1.45
TRIO-223ENST00000515710 UBE3CQ15386 1083 aa24.09■■□□□ 1.45
TRIO-223ENST00000515710 SLFNL1Q499Z3 407 aa24.09■■□□□ 1.45
TRIO-223ENST00000515710 UPF3BQ9BZI7 483 aaKnown RBP24.09■■□□□ 1.45
TRIO-223ENST00000515710 CHMP5Q9NZZ3 219 aa24.08■■□□□ 1.45
TRIO-223ENST00000515710 EP400Q96L91 3159 aa24.08■■□□□ 1.45
TRIO-223ENST00000515710 EZH2Q15910 746 aaKnown RBP24.08■■□□□ 1.44
TRIO-223ENST00000515710 ZSWIM6Q9HCJ5 1215 aa24.08■■□□□ 1.44
TRIO-223ENST00000515710 M0R2C6 588 aa24.07■■□□□ 1.44
TRIO-223ENST00000515710 IDH1O75874 414 aaKnown RBP24.07■■□□□ 1.44
TRIO-223ENST00000515710 HOXA10P31260 410 aaPredicted RBP24.07■■□□□ 1.44
TRIO-223ENST00000515710 EN1Q05925 392 aaPredicted RBP24.07■■□□□ 1.44
TRIO-223ENST00000515710 KRT32Q14532 448 aa24.07■■□□□ 1.44
TRIO-223ENST00000515710 SLC9C2Q5TAH2 1124 aa24.07■■□□□ 1.44
TRIO-223ENST00000515710 FBXO33Q7Z6M2 555 aa24.07■■□□□ 1.44
TRIO-223ENST00000515710 ZBTB22O15209 634 aa24.06■■□□□ 1.44
TRIO-223ENST00000515710 GYG1P46976 350 aa24.06■■□□□ 1.44
TRIO-223ENST00000515710 MAP3K12Q12852 859 aa24.06■■□□□ 1.44
TRIO-223ENST00000515710 FAM84BQ96KN1 310 aaPredicted RBP24.06■■□□□ 1.44
TRIO-223ENST00000515710 JAKMIP1Q96N16 626 aaKnown RBP24.06■■□□□ 1.44
TRIO-223ENST00000515710 LEMD3Q9Y2U8 911 aa24.06■■□□□ 1.44
TRIO-223ENST00000515710 SEMA3EO15041 775 aa24.06■■□□□ 1.44
TRIO-223ENST00000515710 HSPD1P10809 573 aaKnown RBP24.06■■□□□ 1.44
TRIO-223ENST00000515710 CASTP20810 708 aaKnown RBP24.06■■□□□ 1.44
TRIO-223ENST00000515710 DDIT3P35638 169 aa24.06■■□□□ 1.44
TRIO-223ENST00000515710 VPS37DQ86XT2 251 aa24.06■■□□□ 1.44
TRIO-223ENST00000515710 TTC14Q96N46 770 aa24.06■■□□□ 1.44
TRIO-223ENST00000515710 CRAMP1Q96RY5 1269 aa24.06■■□□□ 1.44
TRIO-223ENST00000515710 BRIP1Q9BX63 1249 aa24.06■■□□□ 1.44
TRIO-223ENST00000515710 CIZ1Q9ULV3 898 aaPredicted RBP24.06■■□□□ 1.44
TRIO-223ENST00000515710 CYP46A1Q9Y6A2 500 aa24.06■■□□□ 1.44
TRIO-223ENST00000515710 BBOX1O75936 387 aa24.05■■□□□ 1.44
TRIO-223ENST00000515710 SLC15A2Q16348 729 aa24.05■■□□□ 1.44
TRIO-223ENST00000515710 STK32BQ9NY57 414 aa24.05■■□□□ 1.44
TRIO-223ENST00000515710 DENND2AQ9ULE3 1009 aa24.05■■□□□ 1.44
TRIO-223ENST00000515710 PARP3Q9Y6F1 533 aa24.05■■□□□ 1.44
TRIO-223ENST00000515710 SF3B2Q13435 895 aaKnown RBP24.04■■□□□ 1.44
TRIO-223ENST00000515710 ADCK5Q3MIX3 580 aa24.04■■□□□ 1.44
TRIO-223ENST00000515710 PDE6AP16499 860 aa24.04■■□□□ 1.44
TRIO-223ENST00000515710 DEKP35659 375 aaKnown RBP24.04■■□□□ 1.44
TRIO-223ENST00000515710 VPS53Q5VIR6 699 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms