RNA–Protein interactions for RNA: ENST00000514738.5

CDH6-205, Transcript of cadherin 6, humanhuman

TSL 1 (best) BASIC

Gene CDH6, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-205ENST00000514738 KDRP35968 1356 aa18.59■□□□□ 0.57
CDH6-205ENST00000514738 RPAP1Q9BWH6 1393 aaPredicted RBP18.59■□□□□ 0.57
CDH6-205ENST00000514738 GRIN2AQ12879 1464 aa18.59■□□□□ 0.57
CDH6-205ENST00000514738 TMEM110Q86TL2 294 aa18.59■□□□□ 0.57
CDH6-205ENST00000514738 MIPOL1Q8TD10 442 aa18.59■□□□□ 0.57
CDH6-205ENST00000514738 UBA5Q9GZZ9 404 aa18.59■□□□□ 0.57
CDH6-205ENST00000514738 TPCN1Q9ULQ1 816 aa18.59■□□□□ 0.57
CDH6-205ENST00000514738 RPGRIP1LQ68CZ1 1315 aa18.59■□□□□ 0.57
CDH6-205ENST00000514738 ERICH2A1L162 156 aa18.58■□□□□ 0.57
CDH6-205ENST00000514738 PARP9Q8IXQ6 854 aa18.58■□□□□ 0.57
CDH6-205ENST00000514738 LAMC3Q9Y6N6 1575 aa18.58■□□□□ 0.57
CDH6-205ENST00000514738 SYNRGQ9UMZ2 1314 aa18.58■□□□□ 0.57
CDH6-205ENST00000514738 PDHBP11177 359 aa18.58■□□□□ 0.56
CDH6-205ENST00000514738 E2F5Q15329 346 aa18.58■□□□□ 0.56
CDH6-205ENST00000514738 FAM114A1Q8IWE2 563 aa18.58■□□□□ 0.56
CDH6-205ENST00000514738 CXorf38Q8TB03 319 aa18.58■□□□□ 0.56
CDH6-205ENST00000514738 SMNDC1O75940 238 aaKnown RBP eCLIP18.57■□□□□ 0.56
CDH6-205ENST00000514738 KIAA0754O94854 1291 aa18.57■□□□□ 0.56
CDH6-205ENST00000514738 TXLNAP40222 546 aa18.57■□□□□ 0.56
CDH6-205ENST00000514738 CUL4AQ13619 759 aa18.57■□□□□ 0.56
CDH6-205ENST00000514738 CCDC40Q4G0X9 1142 aa18.57■□□□□ 0.56
CDH6-205ENST00000514738 MTHFD1LQ6UB35 978 aa18.57■□□□□ 0.56
CDH6-205ENST00000514738 HOOK2Q96ED9 719 aa18.57■□□□□ 0.56
CDH6-205ENST00000514738 GORASP1Q9BQQ3 440 aa18.57■□□□□ 0.56
CDH6-205ENST00000514738 SRCIN1Q9C0H9 1055 aa18.57■□□□□ 0.56
CDH6-205ENST00000514738 TBC1D7Q9P0N9 293 aa18.57■□□□□ 0.56
CDH6-205ENST00000514738 PARP3Q9Y6F1 533 aa18.57■□□□□ 0.56
CDH6-205ENST00000514738 F8VZ95 297 aa18.57■□□□□ 0.56
CDH6-205ENST00000514738 SHOX2O60902 331 aaPredicted RBP18.57■□□□□ 0.56
CDH6-205ENST00000514738 VCAM1P19320 739 aa18.57■□□□□ 0.56
CDH6-205ENST00000514738 FOXD4Q12950 439 aaPredicted RBP18.57■□□□□ 0.56
CDH6-205ENST00000514738 BZW1Q7L1Q6 419 aaKnown RBP18.57■□□□□ 0.56
CDH6-205ENST00000514738 CCDC50Q8IVM0 306 aa18.57■□□□□ 0.56
CDH6-205ENST00000514738 IQCF2Q8IXL9 164 aa18.57■□□□□ 0.56
CDH6-205ENST00000514738 HELBQ8NG08 1087 aaPredicted RBP18.57■□□□□ 0.56
CDH6-205ENST00000514738 TEKT1Q969V4 418 aa18.57■□□□□ 0.56
CDH6-205ENST00000514738 G3BP1Q13283 466 aaKnown RBP eCLIP18.56■□□□□ 0.56
CDH6-205ENST00000514738 MAP3K11Q16584 847 aa18.56■□□□□ 0.56
CDH6-205ENST00000514738 FAM228AQ86W67 206 aa18.56■□□□□ 0.56
CDH6-205ENST00000514738 DZIP1LQ8IYY4 767 aaKnown RBP18.56■□□□□ 0.56
CDH6-205ENST00000514738 CUL5Q93034 780 aa18.56■□□□□ 0.56
CDH6-205ENST00000514738 DHRS1Q96LJ7 313 aa18.56■□□□□ 0.56
CDH6-205ENST00000514738 FAM81BQ96LP2 452 aa18.56■□□□□ 0.56
CDH6-205ENST00000514738 HDAC6Q9UBN7 1215 aa18.56■□□□□ 0.56
CDH6-205ENST00000514738 L1RE1Q9UN81 338 aa18.56■□□□□ 0.56
CDH6-205ENST00000514738 USP16Q9Y5T5 823 aa18.56■□□□□ 0.56
CDH6-205ENST00000514738 FERP16591 822 aa18.56■□□□□ 0.56
CDH6-205ENST00000514738 INTS4Q96HW7 963 aaKnown RBP18.56■□□□□ 0.56
CDH6-205ENST00000514738 NACA2Q9H009 215 aa18.56■□□□□ 0.56
CDH6-205ENST00000514738 ZCWPW1Q9H0M4 648 aa18.56■□□□□ 0.56
CDH6-205ENST00000514738 CORO1CQ9ULV4 474 aaPredicted RBP18.56■□□□□ 0.56
CDH6-205ENST00000514738 GCC2Q8IWJ2 1684 aa18.55■□□□□ 0.56
CDH6-205ENST00000514738 KDM6BO15054 1643 aa18.55■□□□□ 0.56
CDH6-205ENST00000514738 GNAI3P08754 354 aa18.55■□□□□ 0.56
CDH6-205ENST00000514738 SAPCD2Q86UD0 394 aa18.55■□□□□ 0.56
CDH6-205ENST00000514738 KCNN1Q92952 543 aa18.55■□□□□ 0.56
CDH6-205ENST00000514738 ZNF644Q9H582 1327 aaPredicted RBP18.55■□□□□ 0.56
CDH6-205ENST00000514738 RNF40O75150 1001 aa18.55■□□□□ 0.56
CDH6-205ENST00000514738 NBPF7P0C2Y1 421 aaPredicted RBP18.55■□□□□ 0.56
CDH6-205ENST00000514738 TRIM58Q8NG06 486 aa18.55■□□□□ 0.56
CDH6-205ENST00000514738 A0A1B0GVG6 124 aa18.54■□□□□ 0.56
CDH6-205ENST00000514738 GOLGA6L19H0YKK7 550 aa18.54■□□□□ 0.56
CDH6-205ENST00000514738 E2F6O75461 281 aa18.54■□□□□ 0.56
CDH6-205ENST00000514738 SLC8A1P32418 973 aa18.54■□□□□ 0.56
CDH6-205ENST00000514738 BCAS4Q8TDM0 211 aa18.54■□□□□ 0.56
CDH6-205ENST00000514738 TRPC6Q9Y210 931 aa18.54■□□□□ 0.56
CDH6-205ENST00000514738 CYP27B1O15528 508 aa18.54■□□□□ 0.56
CDH6-205ENST00000514738 ARHGAP25P42331 645 aa18.54■□□□□ 0.56
CDH6-205ENST00000514738 GOLGA6L10A6NI86 522 aa18.53■□□□□ 0.56
CDH6-205ENST00000514738 MEFVO15553 781 aaPredicted RBP18.53■□□□□ 0.56
CDH6-205ENST00000514738 FIBPO43427 364 aa18.53■□□□□ 0.56
CDH6-205ENST00000514738 KIF4AO95239 1232 aa18.53■□□□□ 0.56
CDH6-205ENST00000514738 PPP2R1AP30153 589 aa18.53■□□□□ 0.56
CDH6-205ENST00000514738 PPP2R3AQ06190 1150 aa18.53■□□□□ 0.56
CDH6-205ENST00000514738 GOLGA1Q92805 767 aa18.53■□□□□ 0.56
CDH6-205ENST00000514738 SCLT1Q96NL6 688 aa18.53■□□□□ 0.56
CDH6-205ENST00000514738 ATP1B4Q9UN42 357 aaPredicted RBP18.53■□□□□ 0.56
CDH6-205ENST00000514738 RALGAPBQ86X10 1494 aa18.53■□□□□ 0.56
CDH6-205ENST00000514738 GNAT1P11488 350 aa18.53■□□□□ 0.56
CDH6-205ENST00000514738 IRAK1P51617 712 aa18.53■□□□□ 0.56
CDH6-205ENST00000514738 SARM1Q6SZW1 724 aa18.53■□□□□ 0.56
CDH6-205ENST00000514738 TRAIPQ9BWF2 469 aa18.53■□□□□ 0.56
CDH6-205ENST00000514738 SLC40A1Q9NP59 571 aa18.53■□□□□ 0.56
CDH6-205ENST00000514738 MSH6P52701 1360 aa18.53■□□□□ 0.56
CDH6-205ENST00000514738 FANCGO15287 622 aa18.52■□□□□ 0.56
CDH6-205ENST00000514738 USP5P45974 858 aa18.52■□□□□ 0.56
CDH6-205ENST00000514738 MYBPC3Q14896 1274 aa18.52■□□□□ 0.56
CDH6-205ENST00000514738 PUS10Q3MIT2 529 aaKnown RBP18.52■□□□□ 0.56
CDH6-205ENST00000514738 ARHGAP45Q92619 1136 aa18.52■□□□□ 0.56
CDH6-205ENST00000514738 VCPKMTQ9H867 229 aa18.52■□□□□ 0.56
CDH6-205ENST00000514738 SUGCTQ9HAC7 445 aa18.52■□□□□ 0.56
CDH6-205ENST00000514738 GAPVD1Q14C86 1478 aa18.52■□□□□ 0.56
CDH6-205ENST00000514738 ERLIN1O75477 346 aa18.52■□□□□ 0.56
CDH6-205ENST00000514738 CASP8Q14790 479 aa18.52■□□□□ 0.56
CDH6-205ENST00000514738 TRIM65Q6PJ69 517 aa18.52■□□□□ 0.56
CDH6-205ENST00000514738 SYCP3Q8IZU3 236 aa18.52■□□□□ 0.56
CDH6-205ENST00000514738 SPAG5Q96R06 1193 aa18.52■□□□□ 0.56
CDH6-205ENST00000514738 TSC22D3Q99576 134 aa18.52■□□□□ 0.56
CDH6-205ENST00000514738 ZNF165P49910 485 aa18.51■□□□□ 0.55
CDH6-205ENST00000514738 GSDMDP57764 484 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms