RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 CNGA1P29973 690 aa8.6□□□□□ -1.03
CCDC30-214ENST00000514642 TRIM5Q9C035 493 aa8.6□□□□□ -1.03
CCDC30-214ENST00000514642 SPON1Q9HCB6 807 aa8.6□□□□□ -1.03
CCDC30-214ENST00000514642 RIMBP3CA6NJZ7 1639 aa8.6□□□□□ -1.03
CCDC30-214ENST00000514642 RIMBP3BA6NNM3 1639 aa8.6□□□□□ -1.03
CCDC30-214ENST00000514642 RIMBP3Q9UFD9 1639 aa8.6□□□□□ -1.03
CCDC30-214ENST00000514642 ARHGEF12Q9NZN5 1544 aa8.6□□□□□ -1.03
CCDC30-214ENST00000514642 STX6O43752 255 aa8.59□□□□□ -1.03
CCDC30-214ENST00000514642 SUPT20HL1Q3ZLR7 823 aa8.59□□□□□ -1.03
CCDC30-214ENST00000514642 RHPN1Q8TCX5 695 aa8.59□□□□□ -1.03
CCDC30-214ENST00000514642 RBM28Q9NW13 759 aaKnown RBP8.59□□□□□ -1.03
CCDC30-214ENST00000514642 PIM2Q9P1W9 311 aa8.59□□□□□ -1.03
CCDC30-214ENST00000514642 MIGA1Q8NAN2 632 aa8.59□□□□□ -1.03
CCDC30-214ENST00000514642 A2ML1A8K2U0 1454 aa8.59□□□□□ -1.03
CCDC30-214ENST00000514642 GRIN3BO60391 1043 aa8.59□□□□□ -1.03
CCDC30-214ENST00000514642 ERCC4Q92889 916 aaPredicted RBP8.59□□□□□ -1.03
CCDC30-214ENST00000514642 FAM89AQ96GI7 184 aa8.59□□□□□ -1.03
CCDC30-214ENST00000514642 NEK1Q96PY6 1258 aa8.59□□□□□ -1.03
CCDC30-214ENST00000514642 KIAA0232Q92628 1395 aa8.59□□□□□ -1.03
CCDC30-214ENST00000514642 BMP15O95972 392 aa8.59□□□□□ -1.03
CCDC30-214ENST00000514642 GBP2P32456 591 aaPredicted RBP8.59□□□□□ -1.03
CCDC30-214ENST00000514642 C2orf69Q8N8R5 385 aa8.59□□□□□ -1.03
CCDC30-214ENST00000514642 LOC102724428A0A0B4J2F2 783 aa8.59□□□□□ -1.03
CCDC30-214ENST00000514642 CCDC192P0DO97 292 aa8.59□□□□□ -1.03
CCDC30-214ENST00000514642 NEFHP12036 1026 aa8.59□□□□□ -1.03
CCDC30-214ENST00000514642 SIK1P57059 783 aa8.59□□□□□ -1.03
CCDC30-214ENST00000514642 MICU3Q86XE3 530 aa8.59□□□□□ -1.03
CCDC30-214ENST00000514642 FAM114A1Q8IWE2 563 aa8.59□□□□□ -1.03
CCDC30-214ENST00000514642 PUF60Q9UHX1 559 aaKnown RBP8.59□□□□□ -1.03
CCDC30-214ENST00000514642 BLMP54132 1417 aaPredicted RBP8.58□□□□□ -1.04
CCDC30-214ENST00000514642 CCNA1P78396 465 aa8.58□□□□□ -1.04
CCDC30-214ENST00000514642 GRIPAP1Q4V328 841 aa8.58□□□□□ -1.04
CCDC30-214ENST00000514642 CCDC83Q8IWF9 413 aa8.58□□□□□ -1.04
CCDC30-214ENST00000514642 TAF4BQ92750 862 aa8.58□□□□□ -1.04
CCDC30-214ENST00000514642 PTPDC1A2A3K4 754 aa8.58□□□□□ -1.04
CCDC30-214ENST00000514642 ZBTB43O43298 467 aa8.58□□□□□ -1.04
CCDC30-214ENST00000514642 PHKG2P15735 406 aa8.58□□□□□ -1.04
CCDC30-214ENST00000514642 ZNF354CQ86Y25 554 aa8.58□□□□□ -1.04
CCDC30-214ENST00000514642 TFCP2Q12800 502 aa8.58□□□□□ -1.04
CCDC30-214ENST00000514642 CC2D2BQ6DHV5 1058 aa8.58□□□□□ -1.04
CCDC30-214ENST00000514642 HACE1Q8IYU2 909 aa8.58□□□□□ -1.04
CCDC30-214ENST00000514642 USPL1Q5W0Q7 1092 aa8.58□□□□□ -1.04
CCDC30-214ENST00000514642 TTC16Q8NEE8 873 aa8.58□□□□□ -1.04
CCDC30-214ENST00000514642 IMPG2Q9BZV3 1241 aa8.58□□□□□ -1.04
CCDC30-214ENST00000514642 KRT13P13646 458 aa8.58□□□□□ -1.04
CCDC30-214ENST00000514642 ATP8B2P98198 1209 aa8.58□□□□□ -1.04
CCDC30-214ENST00000514642 SETQ01105 290 aaPredicted RBP8.58□□□□□ -1.04
CCDC30-214ENST00000514642 CACNA2D4Q7Z3S7 1137 aa8.58□□□□□ -1.04
CCDC30-214ENST00000514642 GLT8D2Q9H1C3 349 aa8.58□□□□□ -1.04
CCDC30-214ENST00000514642 AZI2Q9H6S1 392 aa8.58□□□□□ -1.04
CCDC30-214ENST00000514642 PNMA2Q9UL42 364 aa8.58□□□□□ -1.04
CCDC30-214ENST00000514642 CRKLP46109 303 aaKnown RBP8.57□□□□□ -1.04
CCDC30-214ENST00000514642 GCC2Q8IWJ2 1684 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 A1BGP04217 495 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 SERPINB2P05120 415 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 CCDC24Q8N4L8 307 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 TCHPQ9BT92 498 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 USP40Q9NVE5 1235 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 RTL1A6NKG5 1358 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 CALML3P27482 149 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 GNA11P29992 359 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 NOP2P46087 812 aaKnown RBP8.57□□□□□ -1.04
CCDC30-214ENST00000514642 IREB2P48200 963 aaKnown RBP8.57□□□□□ -1.04
CCDC30-214ENST00000514642 CCT2P78371 535 aaKnown RBP8.57□□□□□ -1.04
CCDC30-214ENST00000514642 NFKBIBQ15653 356 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 CCDC40Q4G0X9 1142 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 EP400NLQ6ZTU2 488 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 CDAN1Q8IWY9 1227 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 BICC1Q9H694 974 aaKnown RBP8.57□□□□□ -1.04
CCDC30-214ENST00000514642 SYNCQ9H7C4 482 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 STK24Q9Y6E0 443 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 PREX2Q70Z35 1606 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 UBA7P41226 1012 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 SLC27A3Q5K4L6 730 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 PAGR1Q9BTK6 254 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 ARGLU1Q9NWB6 273 aaPredicted RBP8.57□□□□□ -1.04
CCDC30-214ENST00000514642 SSX2IPQ9Y2D8 614 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 LPIN2Q92539 896 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 WDR17Q8IZU2 1322 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 RAD50Q92878 1312 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 GTF2IP78347 998 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 ZYXQ15942 572 aaKnown RBP8.57□□□□□ -1.04
CCDC30-214ENST00000514642 CWF19L2Q2TBE0 894 aaKnown RBP8.57□□□□□ -1.04
CCDC30-214ENST00000514642 MRPL50Q8N5N7 158 aaKnown RBP8.57□□□□□ -1.04
CCDC30-214ENST00000514642 EXOC1Q9NV70 894 aa8.57□□□□□ -1.04
CCDC30-214ENST00000514642 TTF2Q9UNY4 1162 aaKnown RBP8.57□□□□□ -1.04
CCDC30-214ENST00000514642 ANKARQ7Z5J8 1434 aa8.56□□□□□ -1.04
CCDC30-214ENST00000514642 CDC42BPGQ6DT37 1551 aa8.56□□□□□ -1.04
CCDC30-214ENST00000514642 RPS8P62241 208 aaKnown RBP8.56□□□□□ -1.04
CCDC30-214ENST00000514642 TCP10Q12799 353 aa8.56□□□□□ -1.04
CCDC30-214ENST00000514642 IQCEQ6IPM2 695 aa8.56□□□□□ -1.04
CCDC30-214ENST00000514642 KIF1BO60333 1816 aa8.56□□□□□ -1.04
CCDC30-214ENST00000514642 NR1I2O75469 434 aa8.56□□□□□ -1.04
CCDC30-214ENST00000514642 CCDC172P0C7W6 258 aa8.56□□□□□ -1.04
CCDC30-214ENST00000514642 GCKRQ14397 625 aa8.56□□□□□ -1.04
CCDC30-214ENST00000514642 KANK3Q6NY19 840 aa8.56□□□□□ -1.04
CCDC30-214ENST00000514642 TTLL6Q8N841 843 aa8.56□□□□□ -1.04
CCDC30-214ENST00000514642 TCP10L2B9ZVM9 353 aa8.56□□□□□ -1.04
CCDC30-214ENST00000514642 PRC1O43663 620 aa8.56□□□□□ -1.04
CCDC30-214ENST00000514642 PRPF40AO75400 957 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms