RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 CNTNAP3Q9BZ76 1288 aa7.35□□□□□ -1.23
CALCOCO2-222ENST00000514006 ZNF408Q9H9D4 720 aa7.35□□□□□ -1.23
CALCOCO2-222ENST00000514006 EFCC1Q9HA90 598 aa7.35□□□□□ -1.23
CALCOCO2-222ENST00000514006 GINM1Q9NU53 330 aa7.35□□□□□ -1.23
CALCOCO2-222ENST00000514006 TLR7Q9NYK1 1049 aaKnown RBP7.35□□□□□ -1.23
CALCOCO2-222ENST00000514006 DNMT3LQ9UJW3 386 aa7.35□□□□□ -1.23
CALCOCO2-222ENST00000514006 TBX22Q9Y458 520 aa7.35□□□□□ -1.23
CALCOCO2-222ENST00000514006 FAM187AA6NFU0 413 aa7.34□□□□□ -1.23
CALCOCO2-222ENST00000514006 AVPP01185 164 aa7.34□□□□□ -1.23
CALCOCO2-222ENST00000514006 FAM160A1Q05DH4 1040 aa7.34□□□□□ -1.23
CALCOCO2-222ENST00000514006 COL9A2Q14055 689 aaPredicted RBP7.34□□□□□ -1.23
CALCOCO2-222ENST00000514006 ZNF746Q6NUN9 644 aaPredicted RBP7.34□□□□□ -1.23
CALCOCO2-222ENST00000514006 FBXL19Q6PCT2 694 aa7.34□□□□□ -1.23
CALCOCO2-222ENST00000514006 ANKRD13AQ8IZ07 590 aa7.34□□□□□ -1.23
CALCOCO2-222ENST00000514006 MRFAP1L1Q96HT8 127 aa7.34□□□□□ -1.23
CALCOCO2-222ENST00000514006 TLR6Q9Y2C9 796 aa7.34□□□□□ -1.23
CALCOCO2-222ENST00000514006 SENP3-EIF4A1A0A087X0R7 540 aa7.33□□□□□ -1.24
CALCOCO2-222ENST00000514006 K7ELQ4 463 aaPredicted RBP7.33□□□□□ -1.24
CALCOCO2-222ENST00000514006 MAP3K6O95382 1288 aa7.33□□□□□ -1.24
CALCOCO2-222ENST00000514006 PF4P02776 101 aa7.33□□□□□ -1.24
CALCOCO2-222ENST00000514006 CELA3AP09093 270 aa7.33□□□□□ -1.24
CALCOCO2-222ENST00000514006 MAPTP10636 758 aaKnown RBP7.33□□□□□ -1.24
CALCOCO2-222ENST00000514006 ACPPP15309 386 aa7.33□□□□□ -1.24
CALCOCO2-222ENST00000514006 SOX9P48436 509 aa7.33□□□□□ -1.24
CALCOCO2-222ENST00000514006 TNP2Q05952 138 aa7.33□□□□□ -1.24
CALCOCO2-222ENST00000514006 SPEM2Q0P670 501 aa7.33□□□□□ -1.24
CALCOCO2-222ENST00000514006 SNAP47Q5SQN1 464 aa7.33□□□□□ -1.24
CALCOCO2-222ENST00000514006 COL13A1Q5TAT6 717 aaPredicted RBP7.33□□□□□ -1.24
CALCOCO2-222ENST00000514006 ZNF662Q6ZS27 426 aa7.33□□□□□ -1.24
CALCOCO2-222ENST00000514006 CPLX3Q8WVH0 158 aa7.33□□□□□ -1.24
CALCOCO2-222ENST00000514006 SPACA7Q96KW9 195 aa7.33□□□□□ -1.24
CALCOCO2-222ENST00000514006 NUCKS1Q9H1E3 243 aaKnown RBP7.33□□□□□ -1.24
CALCOCO2-222ENST00000514006 KCNQ5Q9NR82 932 aa7.33□□□□□ -1.24
CALCOCO2-222ENST00000514006 STRN4Q9NRL3 753 aa7.33□□□□□ -1.24
CALCOCO2-222ENST00000514006 MARK1Q9P0L2 795 aa7.33□□□□□ -1.24
CALCOCO2-222ENST00000514006 PDZRN3Q9UPQ7 1066 aa7.33□□□□□ -1.24
CALCOCO2-222ENST00000514006 MRVI1Q9Y6F6 885 aa7.33□□□□□ -1.24
CALCOCO2-222ENST00000514006 MAN1A2O60476 641 aa7.32□□□□□ -1.24
CALCOCO2-222ENST00000514006 HOXD8P13378 290 aaPredicted RBP7.32□□□□□ -1.24
CALCOCO2-222ENST00000514006 ITPKAP23677 461 aa7.32□□□□□ -1.24
CALCOCO2-222ENST00000514006 GRIA4P48058 902 aa7.32□□□□□ -1.24
CALCOCO2-222ENST00000514006 LMNB2Q03252 620 aa7.32□□□□□ -1.24
CALCOCO2-222ENST00000514006 SERINC3Q13530 473 aa7.32□□□□□ -1.24
CALCOCO2-222ENST00000514006 ANKS3Q6ZW76 656 aa7.32□□□□□ -1.24
CALCOCO2-222ENST00000514006 CEP120Q8N960 986 aa7.32□□□□□ -1.24
CALCOCO2-222ENST00000514006 GOLM1Q8NBJ4 401 aa7.32□□□□□ -1.24
CALCOCO2-222ENST00000514006 BHMTQ93088 406 aa7.32□□□□□ -1.24
CALCOCO2-222ENST00000514006 NSUN5Q96P11 429 aaKnown RBP7.32□□□□□ -1.24
CALCOCO2-222ENST00000514006 TRIM55Q9BYV6 548 aa7.32□□□□□ -1.24
CALCOCO2-222ENST00000514006 IRX2Q9BZI1 471 aaPredicted RBP7.32□□□□□ -1.24
CALCOCO2-222ENST00000514006 DZANK1Q9NVP4 752 aa7.32□□□□□ -1.24
CALCOCO2-222ENST00000514006 H7C1W4 665 aa7.31□□□□□ -1.24
CALCOCO2-222ENST00000514006 U2SURPO15042 1029 aaKnown RBP7.31□□□□□ -1.24
CALCOCO2-222ENST00000514006 GREM1O60565 184 aa7.31□□□□□ -1.24
CALCOCO2-222ENST00000514006 TRPA1O75762 1119 aa7.31□□□□□ -1.24
CALCOCO2-222ENST00000514006 THBS1P07996 1170 aa7.31□□□□□ -1.24
CALCOCO2-222ENST00000514006 GARTP22102 1010 aa7.31□□□□□ -1.24
CALCOCO2-222ENST00000514006 ETFBP38117 255 aa7.31□□□□□ -1.24
CALCOCO2-222ENST00000514006 APOBRQ0VD83 1088 aa7.31□□□□□ -1.24
CALCOCO2-222ENST00000514006 CAMK2GQ13555 558 aaPredicted RBP7.31□□□□□ -1.24
CALCOCO2-222ENST00000514006 SPRED3Q2MJR0 410 aa7.31□□□□□ -1.24
CALCOCO2-222ENST00000514006 EGFLAMQ63HQ2 1017 aa7.31□□□□□ -1.24
CALCOCO2-222ENST00000514006 TTBK2Q6IQ55 1244 aa7.31□□□□□ -1.24
CALCOCO2-222ENST00000514006 DHX32Q7L7V1 743 aaKnown RBP7.31□□□□□ -1.24
CALCOCO2-222ENST00000514006 JAZF1Q86VZ6 243 aa7.31□□□□□ -1.24
CALCOCO2-222ENST00000514006 NLGN1Q8N2Q7 840 aa7.31□□□□□ -1.24
CALCOCO2-222ENST00000514006 MKL1Q969V6 931 aa7.31□□□□□ -1.24
CALCOCO2-222ENST00000514006 BHLHE41Q9C0J9 482 aaPredicted RBP7.31□□□□□ -1.24
CALCOCO2-222ENST00000514006 UBP1Q9NZI7 540 aa7.31□□□□□ -1.24
CALCOCO2-222ENST00000514006 SIRPGQ9P1W8 387 aa7.31□□□□□ -1.24
CALCOCO2-222ENST00000514006 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.31□□□□□ -1.24
CALCOCO2-222ENST00000514006 A0A096LPE4 126 aa7.3□□□□□ -1.24
CALCOCO2-222ENST00000514006 A0A1W2PPZ6 126 aa7.3□□□□□ -1.24
CALCOCO2-222ENST00000514006 METTL12A8MUP2 240 aa7.3□□□□□ -1.24
CALCOCO2-222ENST00000514006 ENC1O14682 589 aa7.3□□□□□ -1.24
CALCOCO2-222ENST00000514006 BNIP3LO60238 219 aa7.3□□□□□ -1.24
CALCOCO2-222ENST00000514006 NRLP54845 237 aa7.3□□□□□ -1.24
CALCOCO2-222ENST00000514006 UBAP2LQ14157 1087 aaKnown RBP7.3□□□□□ -1.24
CALCOCO2-222ENST00000514006 GRIN2CQ14957 1233 aa7.3□□□□□ -1.24
CALCOCO2-222ENST00000514006 AGMOQ6ZNB7 445 aa7.3□□□□□ -1.24
CALCOCO2-222ENST00000514006 RAB44Q7Z6P3 723 aaPredicted RBP7.3□□□□□ -1.24
CALCOCO2-222ENST00000514006 TMEM102Q8N9M5 508 aaPredicted RBP7.3□□□□□ -1.24
CALCOCO2-222ENST00000514006 ASAP3Q8TDY4 903 aa7.3□□□□□ -1.24
CALCOCO2-222ENST00000514006 NKD1Q969G9 470 aa7.3□□□□□ -1.24
CALCOCO2-222ENST00000514006 NECAB3Q96P71 396 aaPredicted RBP7.3□□□□□ -1.24
CALCOCO2-222ENST00000514006 SEC31BQ9NQW1 1179 aa7.3□□□□□ -1.24
CALCOCO2-222ENST00000514006 GPN3Q9UHW5 284 aaPredicted RBP7.3□□□□□ -1.24
CALCOCO2-222ENST00000514006 R3HCC1Q9Y3T6 440 aaKnown RBP7.3□□□□□ -1.24
CALCOCO2-222ENST00000514006 SBNO2Q9Y2G9 1366 aa7.3□□□□□ -1.24
CALCOCO2-222ENST00000514006 TFE3P19532 575 aaPredicted RBP7.29□□□□□ -1.24
CALCOCO2-222ENST00000514006 LMNB1P20700 586 aa7.29□□□□□ -1.24
CALCOCO2-222ENST00000514006 SMCPP49901 116 aaPredicted RBP7.29□□□□□ -1.24
CALCOCO2-222ENST00000514006 RPS26P62854 115 aaKnown RBP7.29□□□□□ -1.24
CALCOCO2-222ENST00000514006 NEUROD1Q13562 356 aa7.29□□□□□ -1.24
CALCOCO2-222ENST00000514006 RPS26P11Q5JNZ5 115 aaPredicted RBP7.29□□□□□ -1.24
CALCOCO2-222ENST00000514006 PCNX4Q63HM2 1172 aa7.29□□□□□ -1.24
CALCOCO2-222ENST00000514006 NXPE3Q969Y0 559 aa7.29□□□□□ -1.24
CALCOCO2-222ENST00000514006 ANAPC16Q96DE5 110 aa7.29□□□□□ -1.24
CALCOCO2-222ENST00000514006 SLC30A3Q99726 388 aa7.29□□□□□ -1.24
CALCOCO2-222ENST00000514006 SRRTQ9BXP5 876 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms