RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 TAF1P21675 1872 aa10.42□□□□□ -0.74
CLDND1-229ENST00000513988 SLC24A1O60721 1099 aa10.42□□□□□ -0.74
CLDND1-229ENST00000513988 PYGBP11216 843 aa10.42□□□□□ -0.74
CLDND1-229ENST00000513988 CCL5P13501 91 aa10.42□□□□□ -0.74
CLDND1-229ENST00000513988 LDLRAD1Q5T700 205 aa10.42□□□□□ -0.74
CLDND1-229ENST00000513988 ALYREFQ86V81 257 aaKnown RBP10.42□□□□□ -0.74
CLDND1-229ENST00000513988 TESK2Q96S53 571 aa10.42□□□□□ -0.74
CLDND1-229ENST00000513988 UBE2OQ9C0C9 1292 aaKnown RBP10.42□□□□□ -0.74
CLDND1-229ENST00000513988 RNF208Q9H0X6 261 aa10.42□□□□□ -0.74
CLDND1-229ENST00000513988 RTL9Q8NET4 1388 aa10.41□□□□□ -0.74
CLDND1-229ENST00000513988 ABCC4O15439 1325 aa10.41□□□□□ -0.74
CLDND1-229ENST00000513988 MUC6Q6W4X9 2439 aa10.41□□□□□ -0.74
CLDND1-229ENST00000513988 BBOX1O75936 387 aa10.41□□□□□ -0.74
CLDND1-229ENST00000513988 MAGEA10P43363 369 aaPredicted RBP10.41□□□□□ -0.74
CLDND1-229ENST00000513988 ZNF280AP59817 542 aaPredicted RBP10.41□□□□□ -0.74
CLDND1-229ENST00000513988 KIF22Q14807 665 aa10.41□□□□□ -0.74
CLDND1-229ENST00000513988 HLFQ16534 295 aa10.41□□□□□ -0.74
CLDND1-229ENST00000513988 WASHC4Q2M389 1173 aa10.41□□□□□ -0.74
CLDND1-229ENST00000513988 ZNF697Q5TEC3 545 aa10.41□□□□□ -0.74
CLDND1-229ENST00000513988 C3orf67Q6ZVT6 689 aa10.41□□□□□ -0.74
CLDND1-229ENST00000513988 C7orf61Q8IZ16 206 aa10.41□□□□□ -0.74
CLDND1-229ENST00000513988 SLC39A7Q92504 469 aa10.41□□□□□ -0.74
CLDND1-229ENST00000513988 WNK4Q96J92 1243 aa10.41□□□□□ -0.74
CLDND1-229ENST00000513988 CDX2Q99626 313 aaPredicted RBP10.41□□□□□ -0.74
CLDND1-229ENST00000513988 KCNQ5Q9NR82 932 aa10.41□□□□□ -0.74
CLDND1-229ENST00000513988 ANGEL1Q9UNK9 670 aaKnown RBP10.41□□□□□ -0.74
CLDND1-229ENST00000513988 TTLL13PA6NNM8 815 aa10.4□□□□□ -0.74
CLDND1-229ENST00000513988 ECE2O60344 883 aa10.4□□□□□ -0.74
CLDND1-229ENST00000513988 PRMT2P55345 433 aa10.4□□□□□ -0.74
CLDND1-229ENST00000513988 U2AF1L4Q8WU68 220 aaKnown RBP10.4□□□□□ -0.74
CLDND1-229ENST00000513988 CARD14Q9BXL6 1004 aa10.4□□□□□ -0.74
CLDND1-229ENST00000513988 RIMBP2O15034 1052 aa10.39□□□□□ -0.75
CLDND1-229ENST00000513988 VIL1P09327 827 aaKnown RBP10.39□□□□□ -0.75
CLDND1-229ENST00000513988 C7P10643 843 aa10.39□□□□□ -0.75
CLDND1-229ENST00000513988 TIE1P35590 1138 aa10.39□□□□□ -0.75
CLDND1-229ENST00000513988 NECTIN2Q92692 538 aa10.39□□□□□ -0.75
CLDND1-229ENST00000513988 NLRP3Q96P20 1036 aa10.39□□□□□ -0.75
CLDND1-229ENST00000513988 C1QTNF1Q9BXJ1 281 aa10.39□□□□□ -0.75
CLDND1-229ENST00000513988 MYOZ2Q9NPC6 264 aa10.39□□□□□ -0.75
CLDND1-229ENST00000513988 BIN2Q9UBW5 565 aaPredicted RBP10.39□□□□□ -0.75
CLDND1-229ENST00000513988 LAMB1P07942 1786 aa10.39□□□□□ -0.75
CLDND1-229ENST00000513988 DUOX1Q9NRD9 1551 aa10.39□□□□□ -0.75
CLDND1-229ENST00000513988 IBTKQ9P2D0 1353 aaPredicted RBP10.39□□□□□ -0.75
CLDND1-229ENST00000513988 DDX60Q8IY21 1712 aaKnown RBP10.38□□□□□ -0.75
CLDND1-229ENST00000513988 GNRH1P01148 92 aa10.38□□□□□ -0.75
CLDND1-229ENST00000513988 SYN1P17600 705 aa10.38□□□□□ -0.75
CLDND1-229ENST00000513988 GRK4P32298 578 aa10.38□□□□□ -0.75
CLDND1-229ENST00000513988 TEFQ10587 303 aa10.38□□□□□ -0.75
CLDND1-229ENST00000513988 TAF1CQ15572 869 aaPredicted RBP10.38□□□□□ -0.75
CLDND1-229ENST00000513988 DOK7Q18PE1 504 aa10.38□□□□□ -0.75
CLDND1-229ENST00000513988 P2RX7Q99572 595 aaKnown RBP10.38□□□□□ -0.75
CLDND1-229ENST00000513988 PTPN18Q99952 460 aa10.38□□□□□ -0.75
CLDND1-229ENST00000513988 ARHGAP39Q9C0H5 1083 aa10.38□□□□□ -0.75
CLDND1-229ENST00000513988 ZFYVE28Q9HCC9 887 aa10.38□□□□□ -0.75
CLDND1-229ENST00000513988 USP16Q9Y5T5 823 aa10.38□□□□□ -0.75
CLDND1-229ENST00000513988 ALPK3Q96L96 1907 aa10.38□□□□□ -0.75
CLDND1-229ENST00000513988 UBXN2AP68543 259 aa10.37□□□□□ -0.75
CLDND1-229ENST00000513988 IFNLR1Q8IU57 520 aaPredicted RBP10.37□□□□□ -0.75
CLDND1-229ENST00000513988 AGBL3Q8NEM8 1001 aa10.37□□□□□ -0.75
CLDND1-229ENST00000513988 CLMNQ96JQ2 1002 aa10.37□□□□□ -0.75
CLDND1-229ENST00000513988 ZSWIM8A7E2V4 1837 aa10.36□□□□□ -0.75
CLDND1-229ENST00000513988 C6orf229H3BNL8 230 aa10.36□□□□□ -0.75
CLDND1-229ENST00000513988 SGPL1O95470 568 aa10.36□□□□□ -0.75
CLDND1-229ENST00000513988 USP17L8P0C7I0 530 aa10.36□□□□□ -0.75
CLDND1-229ENST00000513988 FOSL2P15408 326 aa10.36□□□□□ -0.75
CLDND1-229ENST00000513988 GPTP24298 496 aa10.36□□□□□ -0.75
CLDND1-229ENST00000513988 LACTBP83111 547 aaPredicted RBP10.36□□□□□ -0.75
CLDND1-229ENST00000513988 SUSD4Q5VX71 490 aa10.36□□□□□ -0.75
CLDND1-229ENST00000513988 RAET1EQ8TD07 263 aa10.36□□□□□ -0.75
CLDND1-229ENST00000513988 MYLIPQ8WY64 445 aa10.36□□□□□ -0.75
CLDND1-229ENST00000513988 RIPOR2Q9Y4F9 1068 aa10.36□□□□□ -0.75
CLDND1-229ENST00000513988 TESPA1A2RU30 521 aaPredicted RBP10.35□□□□□ -0.75
CLDND1-229ENST00000513988 NBPF26B4DH59 902 aa10.35□□□□□ -0.75
CLDND1-229ENST00000513988 TFRCP02786 760 aaKnown RBP10.35□□□□□ -0.75
CLDND1-229ENST00000513988 NBPF9Q3BBW0 867 aa10.35□□□□□ -0.75
CLDND1-229ENST00000513988 RSBN1LQ6PCB5 846 aaPredicted RBP10.35□□□□□ -0.75
CLDND1-229ENST00000513988 PAWRQ96IZ0 340 aaKnown RBP10.35□□□□□ -0.75
CLDND1-229ENST00000513988 TRIM47Q96LD4 638 aa10.35□□□□□ -0.75
CLDND1-229ENST00000513988 FZD1Q9UP38 647 aa10.35□□□□□ -0.75
CLDND1-229ENST00000513988 SSC5DA1L4H1 1573 aa10.35□□□□□ -0.75
CLDND1-229ENST00000513988 SCN9AQ15858 1988 aa10.34□□□□□ -0.75
CLDND1-229ENST00000513988 G3V3G9 751 aa10.34□□□□□ -0.75
CLDND1-229ENST00000513988 WDHD1O75717 1129 aaPredicted RBP10.34□□□□□ -0.75
CLDND1-229ENST00000513988 NTSR2O95665 410 aa10.34□□□□□ -0.75
CLDND1-229ENST00000513988 CAPN2P17655 700 aa10.34□□□□□ -0.75
CLDND1-229ENST00000513988 MTHFSDQ2M296 383 aaKnown RBP10.34□□□□□ -0.75
CLDND1-229ENST00000513988 NBPF10Q6P3W6 841 aaKnown RBP10.34□□□□□ -0.75
CLDND1-229ENST00000513988 DDX46Q7L014 1031 aaKnown RBP10.34□□□□□ -0.75
CLDND1-229ENST00000513988 TMC4Q7Z404 712 aa10.34□□□□□ -0.75
CLDND1-229ENST00000513988 NECAB2Q7Z6G3 386 aa10.34□□□□□ -0.75
CLDND1-229ENST00000513988 EYA3Q99504 573 aa10.34□□□□□ -0.75
CLDND1-229ENST00000513988 UNC93B1Q9H1C4 597 aa10.34□□□□□ -0.75
CLDND1-229ENST00000513988 PCDHB8Q9UN66 801 aa10.34□□□□□ -0.75
CLDND1-229ENST00000513988 NSFL1CQ9UNZ2 370 aaKnown RBP10.34□□□□□ -0.75
CLDND1-229ENST00000513988 TRIM35Q9UPQ4 493 aa10.34□□□□□ -0.75
CLDND1-229ENST00000513988 UBN2Q6ZU65 1347 aa10.33□□□□□ -0.76
CLDND1-229ENST00000513988 FAM205AQ6ZU69 1335 aa10.33□□□□□ -0.76
CLDND1-229ENST00000513988 NUP98P52948 1817 aa10.33□□□□□ -0.76
CLDND1-229ENST00000513988 HOXD10P28358 340 aa10.33□□□□□ -0.76
CLDND1-229ENST00000513988 GJA5P36382 358 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms