RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 MICAL2O94851 1124 aa6.55□□□□□ -1.36
PDLIM5-218ENST00000513341 PSAPP07602 524 aa6.55□□□□□ -1.36
PDLIM5-218ENST00000513341 GDF6Q6KF10 455 aaPredicted RBP6.55□□□□□ -1.36
PDLIM5-218ENST00000513341 OGFOD2Q6N063 350 aa6.55□□□□□ -1.36
PDLIM5-218ENST00000513341 TRIM42Q8IWZ5 723 aa6.55□□□□□ -1.36
PDLIM5-218ENST00000513341 UTP4Q969X6 686 aaKnown RBP6.55□□□□□ -1.36
PDLIM5-218ENST00000513341 MYO19Q96H55 970 aa6.55□□□□□ -1.36
PDLIM5-218ENST00000513341 FAM83CQ9BQN1 747 aa6.55□□□□□ -1.36
PDLIM5-218ENST00000513341 CARMIL2Q6F5E8 1435 aa6.54□□□□□ -1.36
PDLIM5-218ENST00000513341 CBLL1Q75N03 491 aa6.54□□□□□ -1.36
PDLIM5-218ENST00000513341 GALNT11Q8NCW6 608 aa6.54□□□□□ -1.36
PDLIM5-218ENST00000513341 UCN2Q96RP3 112 aa6.54□□□□□ -1.36
PDLIM5-218ENST00000513341 TNIKQ9UKE5 1360 aa6.54□□□□□ -1.36
PDLIM5-218ENST00000513341 MAP3K4Q9Y6R4 1608 aa6.54□□□□□ -1.36
PDLIM5-218ENST00000513341 HMX2A2RU54 273 aa6.53□□□□□ -1.36
PDLIM5-218ENST00000513341 OPLAHO14841 1288 aa6.53□□□□□ -1.36
PDLIM5-218ENST00000513341 CD68P34810 354 aaPredicted RBP6.53□□□□□ -1.36
PDLIM5-218ENST00000513341 C11orf91Q3C1V1 193 aa6.53□□□□□ -1.36
PDLIM5-218ENST00000513341 FAM20CQ8IXL6 584 aa6.53□□□□□ -1.36
PDLIM5-218ENST00000513341 ZNF594Q96JF6 807 aaPredicted RBP6.53□□□□□ -1.36
PDLIM5-218ENST00000513341 KLK14Q9P0G3 267 aa6.53□□□□□ -1.36
PDLIM5-218ENST00000513341 RTCBQ9Y3I0 505 aaKnown RBP6.53□□□□□ -1.36
PDLIM5-218ENST00000513341 EPRSP07814 1512 aaKnown RBP6.53□□□□□ -1.36
PDLIM5-218ENST00000513341 J3QW42 95 aa6.52□□□□□ -1.37
PDLIM5-218ENST00000513341 DGKZQ13574 1117 aa6.52□□□□□ -1.37
PDLIM5-218ENST00000513341 SHKBP1Q8TBC3 707 aa6.52□□□□□ -1.37
PDLIM5-218ENST00000513341 ADAMTS19Q8TE59 1207 aa6.52□□□□□ -1.37
PDLIM5-218ENST00000513341 ASIC4Q96FT7 647 aa6.52□□□□□ -1.37
PDLIM5-218ENST00000513341 HIF3AQ9Y2N7 669 aa6.52□□□□□ -1.37
PDLIM5-218ENST00000513341 UACAQ9BZF9 1416 aa6.51□□□□□ -1.37
PDLIM5-218ENST00000513341 KDM5BQ9UGL1 1544 aa6.51□□□□□ -1.37
PDLIM5-218ENST00000513341 MMP20O60882 483 aa6.51□□□□□ -1.37
PDLIM5-218ENST00000513341 XYLBO75191 536 aa6.51□□□□□ -1.37
PDLIM5-218ENST00000513341 WISP1O95388 367 aa6.51□□□□□ -1.37
PDLIM5-218ENST00000513341 PRNPP04156 253 aa6.51□□□□□ -1.37
PDLIM5-218ENST00000513341 C8AP07357 584 aa6.51□□□□□ -1.37
PDLIM5-218ENST00000513341 CPSF6Q16630 551 aaKnown RBP eCLIP6.51□□□□□ -1.37
PDLIM5-218ENST00000513341 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.51□□□□□ -1.37
PDLIM5-218ENST00000513341 KIAA1211Q6ZU35 1233 aa6.51□□□□□ -1.37
PDLIM5-218ENST00000513341 ACAD11Q709F0 780 aa6.51□□□□□ -1.37
PDLIM5-218ENST00000513341 ABI1Q8IZP0 508 aa6.51□□□□□ -1.37
PDLIM5-218ENST00000513341 KLHL23Q8NBE8 558 aa6.51□□□□□ -1.37
PDLIM5-218ENST00000513341 QTRT2Q9H974 415 aaKnown RBP6.51□□□□□ -1.37
PDLIM5-218ENST00000513341 TRIM33Q9UPN9 1127 aa6.51□□□□□ -1.37
PDLIM5-218ENST00000513341 ITGB5P18084 799 aa6.5□□□□□ -1.37
PDLIM5-218ENST00000513341 KRTAP4-11Q9BYQ6 195 aa6.5□□□□□ -1.37
PDLIM5-218ENST00000513341 MAGI3Q5TCQ9 1506 aa6.5□□□□□ -1.37
PDLIM5-218ENST00000513341 CUL7Q14999 1698 aa6.49□□□□□ -1.37
PDLIM5-218ENST00000513341 DISP3Q9P2K9 1392 aa6.49□□□□□ -1.37
PDLIM5-218ENST00000513341 FOXO3O43524 673 aa6.49□□□□□ -1.37
PDLIM5-218ENST00000513341 JUNBP17275 347 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-218ENST00000513341 RASA1P20936 1047 aa6.49□□□□□ -1.37
PDLIM5-218ENST00000513341 KCNK4Q9NYG8 393 aa6.49□□□□□ -1.37
PDLIM5-218ENST00000513341 PIM2Q9P1W9 311 aa6.49□□□□□ -1.37
PDLIM5-218ENST00000513341 KCNMB2Q9Y691 235 aa6.49□□□□□ -1.37
PDLIM5-218ENST00000513341 PTPRMP28827 1452 aa6.48□□□□□ -1.37
PDLIM5-218ENST00000513341 PHLDB1Q86UU1 1377 aa6.48□□□□□ -1.37
PDLIM5-218ENST00000513341 MSMPQ1L6U9 139 aa6.48□□□□□ -1.37
PDLIM5-218ENST00000513341 ANKRD34AQ69YU3 496 aa6.48□□□□□ -1.37
PDLIM5-218ENST00000513341 FBXL18Q96ME1 805 aa6.48□□□□□ -1.37
PDLIM5-218ENST00000513341 NSUN5Q96P11 429 aaKnown RBP6.48□□□□□ -1.37
PDLIM5-218ENST00000513341 TTBK1Q5TCY1 1321 aaPredicted RBP6.48□□□□□ -1.37
PDLIM5-218ENST00000513341 LINC01387J3KSC0 135 aa6.47□□□□□ -1.37
PDLIM5-218ENST00000513341 DUOXA2Q1HG44 320 aa6.47□□□□□ -1.37
PDLIM5-218ENST00000513341 BEND4Q6ZU67 534 aa6.47□□□□□ -1.37
PDLIM5-218ENST00000513341 GIMAP7Q8NHV1 300 aa6.47□□□□□ -1.37
PDLIM5-218ENST00000513341 HINFPQ9BQA5 517 aa6.47□□□□□ -1.37
PDLIM5-218ENST00000513341 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.47□□□□□ -1.371e-6■■■■■ 99.3
PDLIM5-218ENST00000513341 CD109Q6YHK3 1445 aa6.47□□□□□ -1.37
PDLIM5-218ENST00000513341 ARAP3Q8WWN8 1544 aa6.46□□□□□ -1.37
PDLIM5-218ENST00000513341 ADAMTSL3P82987 1691 aa6.46□□□□□ -1.37
PDLIM5-218ENST00000513341 CFAP43Q8NDM7 1665 aa6.46□□□□□ -1.37
PDLIM5-218ENST00000513341 FSCN2O14926 492 aa6.46□□□□□ -1.38
PDLIM5-218ENST00000513341 BMP3P12645 472 aa6.46□□□□□ -1.38
PDLIM5-218ENST00000513341 CDC27P30260 824 aa6.46□□□□□ -1.38
PDLIM5-218ENST00000513341 WEE1P30291 646 aa6.46□□□□□ -1.38
PDLIM5-218ENST00000513341 HOXA10P31260 410 aaPredicted RBP6.46□□□□□ -1.38
PDLIM5-218ENST00000513341 LCE4AQ5TA78 99 aa6.46□□□□□ -1.38
PDLIM5-218ENST00000513341 HDGFL1Q5TGJ6 251 aa6.46□□□□□ -1.38
PDLIM5-218ENST00000513341 NLRP13Q86W25 1043 aa6.46□□□□□ -1.38
PDLIM5-218ENST00000513341 OR13H1Q8NG92 308 aa6.46□□□□□ -1.38
PDLIM5-218ENST00000513341 ANGEL1Q9UNK9 670 aaKnown RBP6.46□□□□□ -1.38
PDLIM5-218ENST00000513341 PCF11O94913 1555 aaKnown RBP6.45□□□□□ -1.38
PDLIM5-218ENST00000513341 KIF27Q86VH2 1401 aa6.45□□□□□ -1.38
PDLIM5-218ENST00000513341 WDR64B1ANS9 1081 aa6.45□□□□□ -1.38
PDLIM5-218ENST00000513341 FOSL1P15407 271 aa6.45□□□□□ -1.38
PDLIM5-218ENST00000513341 VSIG10LQ86VR7 867 aa6.45□□□□□ -1.38
PDLIM5-218ENST00000513341 CMTR1Q8N1G2 835 aaKnown RBP6.45□□□□□ -1.38
PDLIM5-218ENST00000513341 WNT8BQ93098 351 aa6.45□□□□□ -1.38
PDLIM5-218ENST00000513341 KRTAP4-5Q9BYR2 181 aa6.45□□□□□ -1.38
PDLIM5-218ENST00000513341 CCDC39Q9UFE4 941 aa6.45□□□□□ -1.38
PDLIM5-218ENST00000513341 WDR7Q9Y4E6 1490 aa6.45□□□□□ -1.38
PDLIM5-218ENST00000513341 ZCCHC11Q5TAX3 1644 aaKnown RBP6.44□□□□□ -1.38
PDLIM5-218ENST00000513341 POM121CA8CG34 1229 aa6.44□□□□□ -1.38
PDLIM5-218ENST00000513341 SMNDC1O75940 238 aaKnown RBP eCLIP6.44□□□□□ -1.38
PDLIM5-218ENST00000513341 PTK7Q13308 1070 aa6.44□□□□□ -1.38
PDLIM5-218ENST00000513341 FAM117BQ6P1L5 589 aa6.44□□□□□ -1.38
PDLIM5-218ENST00000513341 LARP1Q6PKG0 1096 aaKnown RBP6.44□□□□□ -1.38
PDLIM5-218ENST00000513341 NFXL1Q6ZNB6 911 aa6.44□□□□□ -1.38
PDLIM5-218ENST00000513341 TREML1Q86YW5 311 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms