RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 RCOR1Q9UKL0 485 aa10.88□□□□□ -0.67
CPNE4-210ENST00000512332 LAMA4Q16363 1823 aa10.88□□□□□ -0.67
CPNE4-210ENST00000512332 RRP9O43818 475 aaKnown RBP10.88□□□□□ -0.67
CPNE4-210ENST00000512332 CTDNEP1O95476 244 aa10.88□□□□□ -0.67
CPNE4-210ENST00000512332 ADD1P35611 737 aaKnown RBP10.88□□□□□ -0.67
CPNE4-210ENST00000512332 TYRO3Q06418 890 aa10.88□□□□□ -0.67
CPNE4-210ENST00000512332 IFIT5Q13325 482 aaKnown RBP10.88□□□□□ -0.67
CPNE4-210ENST00000512332 HSP90AB3PQ58FF7 597 aa10.88□□□□□ -0.67
CPNE4-210ENST00000512332 GIGYF2Q6Y7W6 1299 aaKnown RBP10.88□□□□□ -0.67
CPNE4-210ENST00000512332 PIBF1Q8WXW3 757 aa10.88□□□□□ -0.67
CPNE4-210ENST00000512332 OSBP2Q969R2 916 aa10.88□□□□□ -0.67
CPNE4-210ENST00000512332 PGBD1Q96JS3 809 aa10.88□□□□□ -0.67
CPNE4-210ENST00000512332 MRVI1Q9Y6F6 885 aa10.88□□□□□ -0.67
CPNE4-210ENST00000512332 MAP3K15Q6ZN16 1313 aa10.87□□□□□ -0.67
CPNE4-210ENST00000512332 TOGARAM1Q9Y4F4 1720 aa10.87□□□□□ -0.67
CPNE4-210ENST00000512332 PDIA3P30101 505 aaKnown RBP10.87□□□□□ -0.67
CPNE4-210ENST00000512332 TTC39AQ5SRH9 613 aa10.87□□□□□ -0.67
CPNE4-210ENST00000512332 WDR19Q8NEZ3 1342 aa10.87□□□□□ -0.67
CPNE4-210ENST00000512332 PTPDC1A2A3K4 754 aa10.86□□□□□ -0.67
CPNE4-210ENST00000512332 M0R2C6 588 aa10.86□□□□□ -0.67
CPNE4-210ENST00000512332 APOBRQ0VD83 1088 aa10.86□□□□□ -0.67
CPNE4-210ENST00000512332 GORABQ5T7V8 394 aa10.86□□□□□ -0.67
CPNE4-210ENST00000512332 PIGBQ92521 554 aa10.86□□□□□ -0.67
CPNE4-210ENST00000512332 APPBP2Q92624 585 aa10.86□□□□□ -0.67
CPNE4-210ENST00000512332 DDX11Q96FC9 970 aa10.86□□□□□ -0.67
CPNE4-210ENST00000512332 LRRC2Q9BYS8 371 aa10.86□□□□□ -0.67
CPNE4-210ENST00000512332 CCDC9Q9Y3X0 531 aaKnown RBP10.86□□□□□ -0.67
CPNE4-210ENST00000512332 RIPOR2Q9Y4F9 1068 aa10.86□□□□□ -0.67
CPNE4-210ENST00000512332 CTAGE5O15320 804 aa10.86□□□□□ -0.67
CPNE4-210ENST00000512332 FKBP4Q02790 459 aaKnown RBP eCLIP10.86□□□□□ -0.67
CPNE4-210ENST00000512332 IMMTQ16891 758 aaKnown RBP10.86□□□□□ -0.67
CPNE4-210ENST00000512332 SLFNL1Q499Z3 407 aa10.86□□□□□ -0.67
CPNE4-210ENST00000512332 TPRNQ4KMQ1 711 aa10.86□□□□□ -0.67
CPNE4-210ENST00000512332 DNAJC10Q8IXB1 793 aa10.86□□□□□ -0.67
CPNE4-210ENST00000512332 STRN4Q9NRL3 753 aa10.86□□□□□ -0.67
CPNE4-210ENST00000512332 R3HCC1Q9Y3T6 440 aaKnown RBP10.86□□□□□ -0.67
CPNE4-210ENST00000512332 GOLGA6L6A8MZA4 724 aa10.85□□□□□ -0.67
CPNE4-210ENST00000512332 FOXP2O15409 715 aa10.85□□□□□ -0.67
CPNE4-210ENST00000512332 BICD2Q8TD16 824 aa10.85□□□□□ -0.67
CPNE4-210ENST00000512332 FAM89AQ96GI7 184 aa10.85□□□□□ -0.67
CPNE4-210ENST00000512332 ZNF396Q96N95 335 aaPredicted RBP10.85□□□□□ -0.67
CPNE4-210ENST00000512332 SPTLC3Q9NUV7 552 aa10.85□□□□□ -0.67
CPNE4-210ENST00000512332 ASAP1Q9ULH1 1129 aa10.85□□□□□ -0.67
CPNE4-210ENST00000512332 AP5Z1O43299 807 aa10.85□□□□□ -0.67
CPNE4-210ENST00000512332 DHX16O60231 1041 aaKnown RBP10.85□□□□□ -0.67
CPNE4-210ENST00000512332 NR1I2O75469 434 aa10.85□□□□□ -0.67
CPNE4-210ENST00000512332 FGAP02671 866 aa10.85□□□□□ -0.67
CPNE4-210ENST00000512332 ADORA1P30542 326 aa10.85□□□□□ -0.67
CPNE4-210ENST00000512332 NOLC1Q14978 699 aaKnown RBP eCLIP10.85□□□□□ -0.67
CPNE4-210ENST00000512332 CAMK4Q16566 473 aa10.85□□□□□ -0.67
CPNE4-210ENST00000512332 TAF7LQ5H9L4 462 aa10.85□□□□□ -0.67
CPNE4-210ENST00000512332 SASS6Q6UVJ0 657 aa10.85□□□□□ -0.67
CPNE4-210ENST00000512332 NLRP10Q86W26 655 aa10.85□□□□□ -0.67
CPNE4-210ENST00000512332 TTLL11Q8NHH1 800 aa10.85□□□□□ -0.67
CPNE4-210ENST00000512332 TTF1Q15361 905 aaPredicted RBP10.84□□□□□ -0.67
CPNE4-210ENST00000512332 ZSCAN25Q6NSZ9 544 aa10.84□□□□□ -0.67
CPNE4-210ENST00000512332 TDRD7Q8NHU6 1098 aaKnown RBP10.84□□□□□ -0.67
CPNE4-210ENST00000512332 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.84□□□□□ -0.67
CPNE4-210ENST00000512332 NHSL1Q5SYE7 1610 aa10.84□□□□□ -0.67
CPNE4-210ENST00000512332 STRCQ7RTU9 1775 aa10.84□□□□□ -0.67
CPNE4-210ENST00000512332 A0A0G2JLW4 131 aa10.84□□□□□ -0.67
CPNE4-210ENST00000512332 ERVV-1B6SEH8 477 aa10.84□□□□□ -0.67
CPNE4-210ENST00000512332 ATP2B3Q16720 1220 aa10.84□□□□□ -0.67
CPNE4-210ENST00000512332 TTLL5Q6EMB2 1281 aa10.84□□□□□ -0.67
CPNE4-210ENST00000512332 MB21D2Q8IYB1 491 aaPredicted RBP10.84□□□□□ -0.67
CPNE4-210ENST00000512332 LRP6O75581 1613 aa10.84□□□□□ -0.67
CPNE4-210ENST00000512332 DISP2A7MBM2 1401 aa10.83□□□□□ -0.68
CPNE4-210ENST00000512332 BCL9O00512 1426 aa10.83□□□□□ -0.68
CPNE4-210ENST00000512332 RIC1Q4ADV7 1423 aa10.83□□□□□ -0.68
CPNE4-210ENST00000512332 ANKRD18BA2A2Z9 1011 aa10.83□□□□□ -0.68
CPNE4-210ENST00000512332 CYP19A1P11511 503 aaPredicted RBP10.83□□□□□ -0.68
CPNE4-210ENST00000512332 FDPSP14324 419 aaKnown RBP10.83□□□□□ -0.68
CPNE4-210ENST00000512332 ZAP70P43403 619 aa10.83□□□□□ -0.68
CPNE4-210ENST00000512332 CTSWP56202 376 aa10.83□□□□□ -0.68
CPNE4-210ENST00000512332 CCT2P78371 535 aaKnown RBP10.83□□□□□ -0.68
CPNE4-210ENST00000512332 SCARF1Q14162 830 aa10.83□□□□□ -0.68
CPNE4-210ENST00000512332 HSP90AA2PQ14568 343 aaPredicted RBP10.83□□□□□ -0.68
CPNE4-210ENST00000512332 WASHC4Q2M389 1173 aa10.83□□□□□ -0.68
CPNE4-210ENST00000512332 ANO6Q4KMQ2 910 aa10.83□□□□□ -0.68
CPNE4-210ENST00000512332 LDHAL6AQ6ZMR3 332 aa10.83□□□□□ -0.68
CPNE4-210ENST00000512332 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.83□□□□□ -0.68
CPNE4-210ENST00000512332 CKAP2LQ8IYA6 745 aa10.83□□□□□ -0.68
CPNE4-210ENST00000512332 VGLL2Q8N8G2 317 aa10.83□□□□□ -0.68
CPNE4-210ENST00000512332 NCOA7Q8NI08 942 aa10.83□□□□□ -0.68
CPNE4-210ENST00000512332 AK7Q96M32 723 aa10.83□□□□□ -0.68
CPNE4-210ENST00000512332 TTC12Q9H892 705 aaPredicted RBP10.83□□□□□ -0.68
CPNE4-210ENST00000512332 CBX8Q9HC52 389 aa10.83□□□□□ -0.68
CPNE4-210ENST00000512332 CARMIL3Q8ND23 1372 aa10.83□□□□□ -0.68
CPNE4-210ENST00000512332 ATRNO75882 1429 aa10.83□□□□□ -0.68
CPNE4-210ENST00000512332 MYH15Q9Y2K3 1946 aa10.83□□□□□ -0.68
CPNE4-210ENST00000512332 DYNC1I1O14576 645 aa10.82□□□□□ -0.68
CPNE4-210ENST00000512332 ITGA6P23229 1130 aa10.82□□□□□ -0.68
CPNE4-210ENST00000512332 UBE3CQ15386 1083 aa10.82□□□□□ -0.68
CPNE4-210ENST00000512332 METTL24Q5JXM2 366 aa10.82□□□□□ -0.68
CPNE4-210ENST00000512332 KIAA1524Q8TCG1 905 aa10.82□□□□□ -0.68
CPNE4-210ENST00000512332 PRIMPOLQ96LW4 560 aa10.82□□□□□ -0.68
CPNE4-210ENST00000512332 PUS7LQ9H0K6 701 aaKnown RBP10.82□□□□□ -0.68
CPNE4-210ENST00000512332 NCOA5Q9HCD5 579 aaKnown RBP10.82□□□□□ -0.68
CPNE4-210ENST00000512332 RTEL1Q9NZ71 1219 aa10.82□□□□□ -0.68
CPNE4-210ENST00000512332 NWD2Q9ULI1 1742 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms