RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-208ENST00000511895 DMRTC2Q8IXT2 367 aaPredicted RBP10□□□□□ -0.81
LINC01088-208ENST00000511895 CCDC74AQ96AQ1 378 aa10□□□□□ -0.81
LINC01088-208ENST00000511895 NPHS2Q9NP85 383 aa10□□□□□ -0.81
LINC01088-208ENST00000511895 GADD45BO75293 160 aaPredicted RBP9.99□□□□□ -0.81
LINC01088-208ENST00000511895 COL9A3Q14050 684 aaPredicted RBP9.99□□□□□ -0.81
LINC01088-208ENST00000511895 IL22RA1Q8N6P7 574 aa9.99□□□□□ -0.81
LINC01088-208ENST00000511895 HHIPQ96QV1 700 aa9.99□□□□□ -0.81
LINC01088-208ENST00000511895 PTPRAP18433 802 aa9.98□□□□□ -0.81
LINC01088-208ENST00000511895 ATP2B2Q01814 1243 aa9.98□□□□□ -0.81
LINC01088-208ENST00000511895 FMR1Q06787 632 aaKnown RBP eCLIP9.98□□□□□ -0.81
LINC01088-208ENST00000511895 PEAR1Q5VY43 1037 aaPredicted RBP9.98□□□□□ -0.81
LINC01088-208ENST00000511895 POP1Q99575 1024 aaKnown RBP9.98□□□□□ -0.81
LINC01088-208ENST00000511895 A0A1W2PP55 124 aa9.97□□□□□ -0.81
LINC01088-208ENST00000511895 P4HBP07237 508 aaKnown RBP9.97□□□□□ -0.81
LINC01088-208ENST00000511895 CDC27P30260 824 aa9.97□□□□□ -0.81
LINC01088-208ENST00000511895 CDC25BP30305 580 aa9.97□□□□□ -0.81
LINC01088-208ENST00000511895 TRIM28Q13263 835 aaKnown RBP9.97□□□□□ -0.81
LINC01088-208ENST00000511895 ENOX2Q16206 610 aaKnown RBP9.97□□□□□ -0.81
LINC01088-208ENST00000511895 PRRT3Q5FWE3 981 aa9.97□□□□□ -0.81
LINC01088-208ENST00000511895 TMEM102Q8N9M5 508 aaPredicted RBP9.97□□□□□ -0.81
LINC01088-208ENST00000511895 ASAP3Q8TDY4 903 aa9.97□□□□□ -0.81
LINC01088-208ENST00000511895 EHD4Q9H223 541 aa9.97□□□□□ -0.81
LINC01088-208ENST00000511895 NLRP2Q9NX02 1062 aa9.97□□□□□ -0.81
LINC01088-208ENST00000511895 FAM229AH3BQW9 127 aa9.96□□□□□ -0.82
LINC01088-208ENST00000511895 NFKBIEO00221 500 aa9.96□□□□□ -0.82
LINC01088-208ENST00000511895 RAC1P63000 192 aa9.96□□□□□ -0.82
LINC01088-208ENST00000511895 CACTIN-AS1Q8N1I8 211 aa9.96□□□□□ -0.82
LINC01088-208ENST00000511895 EPS8L3Q8TE67 593 aaKnown RBP9.96□□□□□ -0.82
LINC01088-208ENST00000511895 LIN7BQ9HAP6 207 aa9.96□□□□□ -0.82
LINC01088-208ENST00000511895 DNAJC14Q6Y2X3 702 aaPredicted RBP9.95□□□□□ -0.82
LINC01088-208ENST00000511895 NXPE3Q969Y0 559 aa9.95□□□□□ -0.82
LINC01088-208ENST00000511895 SH2B1Q9NRF2 756 aaPredicted RBP9.95□□□□□ -0.82
LINC01088-208ENST00000511895 PPME1Q9Y570 386 aa9.95□□□□□ -0.82
LINC01088-208ENST00000511895 CABP4P57796 275 aa9.94□□□□□ -0.82
LINC01088-208ENST00000511895 EAPPQ56P03 285 aaPredicted RBP9.94□□□□□ -0.82
LINC01088-208ENST00000511895 MUC3BQ9H195 1237 aa9.94□□□□□ -0.82
LINC01088-208ENST00000511895 WWC3Q9ULE0 1092 aa9.94□□□□□ -0.82
LINC01088-208ENST00000511895 A0A0A0MRY4 1105 aa9.93□□□□□ -0.82
LINC01088-208ENST00000511895 LDHBP07195 334 aaKnown RBP9.93□□□□□ -0.82
LINC01088-208ENST00000511895 COL8A1P27658 744 aa9.93□□□□□ -0.82
LINC01088-208ENST00000511895 BAG6P46379 1132 aa9.93□□□□□ -0.82
LINC01088-208ENST00000511895 MFAP1P55081 439 aaKnown RBP9.93□□□□□ -0.82
LINC01088-208ENST00000511895 KIAA0319Q5VV43 1072 aa9.93□□□□□ -0.82
LINC01088-208ENST00000511895 ALG1LQ6GMV1 187 aa9.93□□□□□ -0.82
LINC01088-208ENST00000511895 FAM117BQ6P1L5 589 aa9.93□□□□□ -0.82
LINC01088-208ENST00000511895 PI16Q6UXB8 463 aa9.93□□□□□ -0.82
LINC01088-208ENST00000511895 ADAMTSL4Q6UY14 1074 aa9.93□□□□□ -0.82
LINC01088-208ENST00000511895 SETDB2Q96T68 719 aa9.93□□□□□ -0.82
LINC01088-208ENST00000511895 METTL12A8MUP2 240 aa9.92□□□□□ -0.82
LINC01088-208ENST00000511895 LINC01387J3KSC0 135 aa9.92□□□□□ -0.82
LINC01088-208ENST00000511895 ERCC3P19447 782 aa9.92□□□□□ -0.82
LINC01088-208ENST00000511895 RASSF7Q02833 373 aa9.92□□□□□ -0.82
LINC01088-208ENST00000511895 KCNMA1Q12791 1236 aa9.92□□□□□ -0.82
LINC01088-208ENST00000511895 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.92□□□□□ -0.82
LINC01088-208ENST00000511895 TXNDC11Q6PKC3 985 aa9.92□□□□□ -0.82
LINC01088-208ENST00000511895 NPAS4Q8IUM7 802 aa9.92□□□□□ -0.82
LINC01088-208ENST00000511895 BSNDQ8WZ55 320 aa9.92□□□□□ -0.82
LINC01088-208ENST00000511895 BHLHE41Q9C0J9 482 aaPredicted RBP9.92□□□□□ -0.82
LINC01088-208ENST00000511895 ADAM19Q9H013 955 aa9.92□□□□□ -0.82
LINC01088-208ENST00000511895 EPHA1P21709 976 aa9.91□□□□□ -0.82
LINC01088-208ENST00000511895 CCNJLQ8IV13 435 aa9.91□□□□□ -0.82
LINC01088-208ENST00000511895 FBF1Q8TES7 1133 aa9.91□□□□□ -0.82
LINC01088-208ENST00000511895 SPATA31C1P0DKV0 1188 aa9.9□□□□□ -0.82
LINC01088-208ENST00000511895 COL19A1Q14993 1142 aa9.9□□□□□ -0.82
LINC01088-208ENST00000511895 FMR1NBQ8N0W7 255 aaPredicted RBP9.9□□□□□ -0.82
LINC01088-208ENST00000511895 DTWD1Q8N5C7 304 aa9.9□□□□□ -0.82
LINC01088-208ENST00000511895 TCF12Q99081 682 aa9.9□□□□□ -0.82
LINC01088-208ENST00000511895 PPP4R2Q9NY27 417 aa9.9□□□□□ -0.82
LINC01088-208ENST00000511895 TRAK1Q9UPV9 953 aa9.9□□□□□ -0.82
LINC01088-208ENST00000511895 A0A096LPE4 126 aa9.89□□□□□ -0.83
LINC01088-208ENST00000511895 A0A1W2PPZ6 126 aa9.89□□□□□ -0.83
LINC01088-208ENST00000511895 GDF11O95390 407 aa9.89□□□□□ -0.83
LINC01088-208ENST00000511895 GRM2Q14416 872 aa9.89□□□□□ -0.83
LINC01088-208ENST00000511895 SPRED3Q2MJR0 410 aa9.89□□□□□ -0.83
LINC01088-208ENST00000511895 ALYREFQ86V81 257 aaKnown RBP9.89□□□□□ -0.83
LINC01088-208ENST00000511895 TMEM151AQ8N4L1 468 aa9.89□□□□□ -0.83
LINC01088-208ENST00000511895 DCAF5Q96JK2 942 aa9.89□□□□□ -0.83
LINC01088-208ENST00000511895 SOX13Q9UN79 622 aa9.89□□□□□ -0.83
LINC01088-208ENST00000511895 H3BRJ5 948 aa9.88□□□□□ -0.83
LINC01088-208ENST00000511895 APBA3O96018 575 aa9.88□□□□□ -0.83
LINC01088-208ENST00000511895 GRIA4P48058 902 aa9.88□□□□□ -0.83
LINC01088-208ENST00000511895 FGD1P98174 961 aa9.88□□□□□ -0.83
LINC01088-208ENST00000511895 GRIK4Q16099 956 aa9.88□□□□□ -0.83
LINC01088-208ENST00000511895 SLC7A3Q8WY07 619 aa9.88□□□□□ -0.83
LINC01088-208ENST00000511895 BCO2Q9BYV7 579 aa9.88□□□□□ -0.83
LINC01088-208ENST00000511895 PRPF40AO75400 957 aaKnown RBP9.87□□□□□ -0.83
LINC01088-208ENST00000511895 ELNP15502 786 aa9.87□□□□□ -0.83
LINC01088-208ENST00000511895 FBXO11Q86XK2 927 aa9.87□□□□□ -0.83
LINC01088-208ENST00000511895 CARD10Q9BWT7 1032 aa9.87□□□□□ -0.83
LINC01088-208ENST00000511895 SPG7Q9UQ90 795 aa9.87□□□□□ -0.83
LINC01088-208ENST00000511895 FSCN2O14926 492 aa9.86□□□□□ -0.83
LINC01088-208ENST00000511895 DEAF1O75398 565 aaPredicted RBP9.86□□□□□ -0.83
LINC01088-208ENST00000511895 IKBKEQ14164 716 aa9.86□□□□□ -0.83
LINC01088-208ENST00000511895 SETDB1Q15047 1291 aa9.86□□□□□ -0.83
LINC01088-208ENST00000511895 NXPE4Q6UWF7 544 aa9.86□□□□□ -0.83
LINC01088-208ENST00000511895 MAP4K3Q8IVH8 894 aa9.86□□□□□ -0.83
LINC01088-208ENST00000511895 SRA1Q9HD15 236 aaKnown RBP9.86□□□□□ -0.83
LINC01088-208ENST00000511895 ABCC9O60706 1549 aa9.86□□□□□ -0.83
LINC01088-208ENST00000511895 TMEM238LA0A1B0GVL6 79 aa9.85□□□□□ -0.83
LINC01088-208ENST00000511895 ARL4DP49703 201 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms