RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 MTHFSP49914 203 aa9.07□□□□□ -0.96
COPS4-209ENST00000511653 AMOTQ4VCS5 1084 aa9.07□□□□□ -0.96
COPS4-209ENST00000511653 SULT6B1Q6IMI4 303 aa9.07□□□□□ -0.96
COPS4-209ENST00000511653 ARHGAP27Q6ZUM4 889 aa9.07□□□□□ -0.96
COPS4-209ENST00000511653 PNMA1Q8ND90 353 aa9.07□□□□□ -0.96
COPS4-209ENST00000511653 ADAM32Q8TC27 787 aa9.07□□□□□ -0.96
COPS4-209ENST00000511653 RNF166Q96A37 237 aaPredicted RBP9.07□□□□□ -0.96
COPS4-209ENST00000511653 MAFBQ9Y5Q3 323 aaPredicted RBP9.07□□□□□ -0.96
COPS4-209ENST00000511653 PARP3Q9Y6F1 533 aa9.07□□□□□ -0.96
COPS4-209ENST00000511653 TIAM2Q8IVF5 1701 aa9.06□□□□□ -0.96
COPS4-209ENST00000511653 C1orf141Q5JVX7 400 aa9.06□□□□□ -0.96
COPS4-209ENST00000511653 MORC1Q86VD1 984 aa9.06□□□□□ -0.96
COPS4-209ENST00000511653 ANKRD31Q8N7Z5 1873 aa9.06□□□□□ -0.96
COPS4-209ENST00000511653 PCGF6Q9BYE7 350 aa9.06□□□□□ -0.96
COPS4-209ENST00000511653 CLSPNQ9HAW4 1339 aa9.05□□□□□ -0.96
COPS4-209ENST00000511653 CHRNA5P30532 468 aa9.05□□□□□ -0.96
COPS4-209ENST00000511653 IL13P35225 146 aa9.05□□□□□ -0.96
COPS4-209ENST00000511653 C9orf131Q5VYM1 1079 aa9.05□□□□□ -0.96
COPS4-209ENST00000511653 INTS5Q6P9B9 1019 aaKnown RBP9.05□□□□□ -0.96
COPS4-209ENST00000511653 SIPA1L3O60292 1781 aaPredicted RBP9.05□□□□□ -0.96
COPS4-209ENST00000511653 CACNA1SQ13698 1873 aa9.05□□□□□ -0.96
COPS4-209ENST00000511653 COL11A2P13942 1736 aaPredicted RBP9.05□□□□□ -0.96
COPS4-209ENST00000511653 TOMM70O94826 608 aa9.04□□□□□ -0.96
COPS4-209ENST00000511653 PTK2Q05397 1052 aa9.04□□□□□ -0.96
COPS4-209ENST00000511653 TSGA10IPQ3SY00 556 aa9.04□□□□□ -0.96
COPS4-209ENST00000511653 SH3RF1Q7Z6J0 888 aa9.04□□□□□ -0.96
COPS4-209ENST00000511653 DNAJC10Q8IXB1 793 aa9.04□□□□□ -0.96
COPS4-209ENST00000511653 SCN7AQ01118 1682 aa9.04□□□□□ -0.96
COPS4-209ENST00000511653 RNF223E7ERA6 249 aa9.04□□□□□ -0.96
COPS4-209ENST00000511653 POLRMTO00411 1230 aaKnown RBP9.04□□□□□ -0.96
COPS4-209ENST00000511653 HTRA3P83110 453 aa9.04□□□□□ -0.96
COPS4-209ENST00000511653 DNAJC5GQ8N7S2 189 aa9.04□□□□□ -0.96
COPS4-209ENST00000511653 PBXIP1Q96AQ6 731 aa9.04□□□□□ -0.96
COPS4-209ENST00000511653 ARHGAP9Q9BRR9 750 aa9.04□□□□□ -0.96
COPS4-209ENST00000511653 LGR6Q9HBX8 967 aa9.04□□□□□ -0.96
COPS4-209ENST00000511653 PIM2Q9P1W9 311 aa9.04□□□□□ -0.96
COPS4-209ENST00000511653 PCDHB9Q9Y5E1 797 aa9.04□□□□□ -0.96
COPS4-209ENST00000511653 SOS1Q07889 1333 aaPredicted RBP9.03□□□□□ -0.96
COPS4-209ENST00000511653 ITGBL1O95965 494 aaPredicted RBP9.03□□□□□ -0.96
COPS4-209ENST00000511653 SLC39A6Q13433 755 aa9.03□□□□□ -0.96
COPS4-209ENST00000511653 ARMC2Q8NEN0 867 aa9.03□□□□□ -0.96
COPS4-209ENST00000511653 GPKOWQ92917 476 aaPredicted RBP eCLIP9.03□□□□□ -0.96
COPS4-209ENST00000511653 SLC52A2Q9HAB3 445 aa9.03□□□□□ -0.96
COPS4-209ENST00000511653 CEP126Q9P2H0 1117 aa9.03□□□□□ -0.96
COPS4-209ENST00000511653 GPSM3Q9Y4H4 160 aa9.03□□□□□ -0.96
COPS4-209ENST00000511653 COL15A1P39059 1388 aa9.03□□□□□ -0.96
COPS4-209ENST00000511653 CARMIL3Q8ND23 1372 aa9.03□□□□□ -0.96
COPS4-209ENST00000511653 DICER1Q9UPY3 1922 aaKnown RBP9.02□□□□□ -0.96
COPS4-209ENST00000511653 MAGEB6P1A0A0J9YX57 407 aa9.02□□□□□ -0.97
COPS4-209ENST00000511653 ATP9BO43861 1147 aa9.02□□□□□ -0.97
COPS4-209ENST00000511653 HMOX1P09601 288 aa9.02□□□□□ -0.97
COPS4-209ENST00000511653 TM4SF1P30408 202 aa9.02□□□□□ -0.97
COPS4-209ENST00000511653 RASSF7Q02833 373 aa9.02□□□□□ -0.97
COPS4-209ENST00000511653 DALRD3Q5D0E6 543 aaKnown RBP9.02□□□□□ -0.97
COPS4-209ENST00000511653 AKAP4Q5JQC9 854 aa9.02□□□□□ -0.97
COPS4-209ENST00000511653 USPL1Q5W0Q7 1092 aa9.02□□□□□ -0.97
COPS4-209ENST00000511653 DEPDC4Q8N2C3 294 aa9.02□□□□□ -0.97
COPS4-209ENST00000511653 PHTF2Q8N3S3 785 aa9.02□□□□□ -0.97
COPS4-209ENST00000511653 RNF181Q9P0P0 153 aa9.02□□□□□ -0.97
COPS4-209ENST00000511653 HCSTQ9UBK5 93 aa9.02□□□□□ -0.97
COPS4-209ENST00000511653 ZBTB1Q9Y2K1 713 aa9.02□□□□□ -0.97
COPS4-209ENST00000511653 COL3A1P02461 1466 aaPredicted RBP9.01□□□□□ -0.97
COPS4-209ENST00000511653 RNMTO43148 476 aaKnown RBP9.01□□□□□ -0.97
COPS4-209ENST00000511653 CYP19A1P11511 503 aaPredicted RBP9.01□□□□□ -0.97
COPS4-209ENST00000511653 SH3BP2P78314 561 aa9.01□□□□□ -0.97
COPS4-209ENST00000511653 KCNC4Q03721 635 aa9.01□□□□□ -0.97
COPS4-209ENST00000511653 ZNF511Q8NB15 262 aa9.01□□□□□ -0.97
COPS4-209ENST00000511653 KNSTRNQ9Y448 316 aa9.01□□□□□ -0.97
COPS4-209ENST00000511653 FER1L6Q2WGJ9 1857 aa9.01□□□□□ -0.97
COPS4-209ENST00000511653 BCORQ6W2J9 1755 aa9.01□□□□□ -0.97
COPS4-209ENST00000511653 PDIA4P13667 645 aaKnown RBP9□□□□□ -0.97
COPS4-209ENST00000511653 PRELPP51888 382 aa9□□□□□ -0.97
COPS4-209ENST00000511653 NFIXQ14938 502 aa9□□□□□ -0.97
COPS4-209ENST00000511653 SKIP12755 728 aa9□□□□□ -0.97
COPS4-209ENST00000511653 MTHFSDQ2M296 383 aaKnown RBP9□□□□□ -0.97
COPS4-209ENST00000511653 ERFEQ4G0M1 354 aa9□□□□□ -0.97
COPS4-209ENST00000511653 EMID1Q96A84 441 aaPredicted RBP9□□□□□ -0.97
COPS4-209ENST00000511653 NARFQ9UHQ1 456 aa9□□□□□ -0.97
COPS4-209ENST00000511653 KIF7Q2M1P5 1343 aa8.99□□□□□ -0.97
COPS4-209ENST00000511653 SKOR1P84550 965 aa8.99□□□□□ -0.97
COPS4-209ENST00000511653 ZBTB33Q86T24 672 aa8.99□□□□□ -0.97
COPS4-209ENST00000511653 RRAGCQ9HB90 399 aa8.99□□□□□ -0.97
COPS4-209ENST00000511653 ARFGEF2Q9Y6D5 1785 aa8.99□□□□□ -0.97
COPS4-209ENST00000511653 KDM2BQ8NHM5 1336 aa8.99□□□□□ -0.97
COPS4-209ENST00000511653 PPP1R18Q6NYC8 613 aa8.98□□□□□ -0.97
COPS4-209ENST00000511653 C16orf71Q8IYS4 520 aaPredicted RBP8.98□□□□□ -0.97
COPS4-209ENST00000511653 SLX4Q8IY92 1834 aa8.98□□□□□ -0.97
COPS4-209ENST00000511653 USP17L3A6NCW0 530 aa8.97□□□□□ -0.97
COPS4-209ENST00000511653 USP17L4A6NCW7 530 aa8.97□□□□□ -0.97
COPS4-209ENST00000511653 USP17L5A8MUK1 530 aa8.97□□□□□ -0.97
COPS4-209ENST00000511653 NFKBIEO00221 500 aa8.97□□□□□ -0.97
COPS4-209ENST00000511653 SERPINB2P05120 415 aa8.97□□□□□ -0.97
COPS4-209ENST00000511653 USP17L2Q6R6M4 530 aa8.97□□□□□ -0.97
COPS4-209ENST00000511653 USP17L1Q7RTZ2 530 aa8.97□□□□□ -0.97
COPS4-209ENST00000511653 KLRG1Q96E93 195 aa8.97□□□□□ -0.97
COPS4-209ENST00000511653 TRAIPQ9BWF2 469 aa8.97□□□□□ -0.97
COPS4-209ENST00000511653 CANXP27824 592 aaKnown RBP8.97□□□□□ -0.97
COPS4-209ENST00000511653 FSTL1Q12841 308 aa8.97□□□□□ -0.97
COPS4-209ENST00000511653 CCDC85AQ96PX6 553 aaPredicted RBP8.97□□□□□ -0.97
COPS4-209ENST00000511653 EIF5P55010 431 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms