RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 HSPA4P34932 840 aa18.33■□□□□ 0.52
SCLT1-209ENST00000511426 NMIQ13287 307 aaPredicted RBP18.33■□□□□ 0.52
SCLT1-209ENST00000511426 GNL3LQ9NVN8 582 aaKnown RBP18.33■□□□□ 0.52
SCLT1-209ENST00000511426 ZNF804BA4D1E1 1349 aa18.33■□□□□ 0.52
SCLT1-209ENST00000511426 SEMA3EO15041 775 aa18.32■□□□□ 0.52
SCLT1-209ENST00000511426 MSH5O43196 834 aa18.32■□□□□ 0.52
SCLT1-209ENST00000511426 PARP3Q9Y6F1 533 aa18.32■□□□□ 0.52
SCLT1-209ENST00000511426 CCDC171Q6TFL3 1326 aa18.32■□□□□ 0.52
SCLT1-209ENST00000511426 TAF5LO75529 589 aa18.31■□□□□ 0.52
SCLT1-209ENST00000511426 BBOX1O75936 387 aa18.31■□□□□ 0.52
SCLT1-209ENST00000511426 MCAMP43121 646 aa18.31■□□□□ 0.52
SCLT1-209ENST00000511426 FKBP4Q02790 459 aaKnown RBP eCLIP18.31■□□□□ 0.52
SCLT1-209ENST00000511426 MCMDC2Q4G0Z9 681 aa18.31■□□□□ 0.52
SCLT1-209ENST00000511426 CAVIN4Q5BKX8 364 aa18.31■□□□□ 0.52
SCLT1-209ENST00000511426 HSCBQ8IWL3 235 aa18.31■□□□□ 0.52
SCLT1-209ENST00000511426 HELBQ8NG08 1087 aaPredicted RBP18.31■□□□□ 0.52
SCLT1-209ENST00000511426 LEMD3Q9Y2U8 911 aa18.31■□□□□ 0.52
SCLT1-209ENST00000511426 PDS5AQ29RF7 1337 aaKnown RBP18.31■□□□□ 0.52
SCLT1-209ENST00000511426 RNF113AO15541 343 aaKnown RBP18.31■□□□□ 0.52
SCLT1-209ENST00000511426 PHKA1P46020 1223 aa18.31■□□□□ 0.52
SCLT1-209ENST00000511426 TMED8Q6PL24 325 aaPredicted RBP18.31■□□□□ 0.52
SCLT1-209ENST00000511426 FAM227BQ96M60 508 aa18.31■□□□□ 0.52
SCLT1-209ENST00000511426 IL25Q9H293 177 aa18.31■□□□□ 0.52
SCLT1-209ENST00000511426 A0A0D9SFI3 127 aa18.3■□□□□ 0.52
SCLT1-209ENST00000511426 PDE6BP35913 854 aa18.3■□□□□ 0.52
SCLT1-209ENST00000511426 ZMYM1Q5SVZ6 1142 aa18.3■□□□□ 0.52
SCLT1-209ENST00000511426 MAP4K1Q92918 833 aa18.3■□□□□ 0.52
SCLT1-209ENST00000511426 EDC3Q96F86 508 aaKnown RBP18.3■□□□□ 0.52
SCLT1-209ENST00000511426 COL4A1P02462 1669 aa18.3■□□□□ 0.52
SCLT1-209ENST00000511426 ST18O60284 1047 aa18.29■□□□□ 0.52
SCLT1-209ENST00000511426 ZAP70P43403 619 aa18.29■□□□□ 0.52
SCLT1-209ENST00000511426 KCNJ4P48050 445 aa18.29■□□□□ 0.52
SCLT1-209ENST00000511426 KCNB2Q92953 911 aa18.29■□□□□ 0.52
SCLT1-209ENST00000511426 TBC1D2Q9BYX2 928 aa18.29■□□□□ 0.52
SCLT1-209ENST00000511426 ANO8Q9HCE9 1232 aaPredicted RBP18.29■□□□□ 0.52
SCLT1-209ENST00000511426 MMP10P09238 476 aa18.28■□□□□ 0.52
SCLT1-209ENST00000511426 MCM2P49736 904 aa18.28■□□□□ 0.52
SCLT1-209ENST00000511426 SCARF1Q14162 830 aa18.28■□□□□ 0.52
SCLT1-209ENST00000511426 RNF20Q5VTR2 975 aa18.28■□□□□ 0.52
SCLT1-209ENST00000511426 C15orf52Q6ZUT6 534 aaKnown RBP18.28■□□□□ 0.52
SCLT1-209ENST00000511426 SPATA5Q8NB90 893 aa18.28■□□□□ 0.52
SCLT1-209ENST00000511426 SLC16A10Q8TF71 515 aa18.28■□□□□ 0.52
SCLT1-209ENST00000511426 HMG20BQ9P0W2 317 aa18.28■□□□□ 0.52
SCLT1-209ENST00000511426 XDHP47989 1333 aa18.28■□□□□ 0.52
SCLT1-209ENST00000511426 AKAP11Q9UKA4 1901 aa18.28■□□□□ 0.52
SCLT1-209ENST00000511426 APPBP2Q92624 585 aa18.28■□□□□ 0.52
SCLT1-209ENST00000511426 NPR1P16066 1061 aa18.27■□□□□ 0.52
SCLT1-209ENST00000511426 ZKSCAN1P17029 563 aaPredicted RBP18.27■□□□□ 0.52
SCLT1-209ENST00000511426 ALDH1B1P30837 517 aa18.27■□□□□ 0.52
SCLT1-209ENST00000511426 RASGRF1Q13972 1273 aa18.27■□□□□ 0.52
SCLT1-209ENST00000511426 UBE3CQ15386 1083 aa18.27■□□□□ 0.52
SCLT1-209ENST00000511426 CCDC24Q8N4L8 307 aa18.27■□□□□ 0.52
SCLT1-209ENST00000511426 DSCC1Q9BVC3 393 aa18.27■□□□□ 0.52
SCLT1-209ENST00000511426 DENND2AQ9ULE3 1009 aa18.27■□□□□ 0.52
SCLT1-209ENST00000511426 CYP2E1P05181 493 aaPredicted RBP18.26■□□□□ 0.51
SCLT1-209ENST00000511426 NECTIN1Q15223 517 aa18.26■□□□□ 0.51
SCLT1-209ENST00000511426 FBXO33Q7Z6M2 555 aa18.26■□□□□ 0.51
SCLT1-209ENST00000511426 ANTXR1Q9H6X2 564 aa18.26■□□□□ 0.51
SCLT1-209ENST00000511426 PODXL2Q9NZ53 605 aa18.26■□□□□ 0.51
SCLT1-209ENST00000511426 NDUFB9Q9Y6M9 179 aa18.26■□□□□ 0.51
SCLT1-209ENST00000511426 U3KPZ7 1027 aaPredicted RBP18.26■□□□□ 0.51
SCLT1-209ENST00000511426 MAP3K12Q12852 859 aa18.25■□□□□ 0.51
SCLT1-209ENST00000511426 ERICH6Q7L0X2 663 aa18.25■□□□□ 0.51
SCLT1-209ENST00000511426 VPS37DQ86XT2 251 aa18.25■□□□□ 0.51
SCLT1-209ENST00000511426 TM6SF1Q9BZW5 370 aa18.25■□□□□ 0.51
SCLT1-209ENST00000511426 LRRC37AA6NMS7 1700 aa18.25■□□□□ 0.51
SCLT1-209ENST00000511426 SRGNP10124 158 aa18.25■□□□□ 0.51
SCLT1-209ENST00000511426 ATP2B4P23634 1241 aa18.25■□□□□ 0.51
SCLT1-209ENST00000511426 ADD2P35612 726 aa18.25■□□□□ 0.51
SCLT1-209ENST00000511426 TSGA10IPQ3SY00 556 aa18.25■□□□□ 0.51
SCLT1-209ENST00000511426 BCAMP50895 628 aa18.24■□□□□ 0.51
SCLT1-209ENST00000511426 ZNF589Q86UQ0 364 aaPredicted RBP18.24■□□□□ 0.51
SCLT1-209ENST00000511426 FAM84BQ96KN1 310 aaPredicted RBP18.24■□□□□ 0.51
SCLT1-209ENST00000511426 RBM8AQ9Y5S9 174 aaKnown RBP18.24■□□□□ 0.51
SCLT1-209ENST00000511426 ANKRD31Q8N7Z5 1873 aa18.24■□□□□ 0.51
SCLT1-209ENST00000511426 DOCK2Q92608 1830 aa18.24■□□□□ 0.51
SCLT1-209ENST00000511426 MAST3O60307 1309 aa18.23■□□□□ 0.51
SCLT1-209ENST00000511426 K7ELQ4 463 aaPredicted RBP18.23■□□□□ 0.51
SCLT1-209ENST00000511426 HIBADHP31937 336 aaKnown RBP18.23■□□□□ 0.51
SCLT1-209ENST00000511426 PTH1RQ03431 593 aa18.23■□□□□ 0.51
SCLT1-209ENST00000511426 KRT32Q14532 448 aa18.23■□□□□ 0.51
SCLT1-209ENST00000511426 SP8Q8IXZ3 490 aa18.23■□□□□ 0.51
SCLT1-209ENST00000511426 MASTLQ96GX5 879 aa18.23■□□□□ 0.51
SCLT1-209ENST00000511426 ANKIB1Q9P2G1 1089 aa18.23■□□□□ 0.51
SCLT1-209ENST00000511426 DUOX1Q9NRD9 1551 aa18.23■□□□□ 0.51
SCLT1-209ENST00000511426 IRS2Q9Y4H2 1338 aa18.22■□□□□ 0.51
SCLT1-209ENST00000511426 SNX14Q9Y5W7 946 aa18.22■□□□□ 0.51
SCLT1-209ENST00000511426 MYH7P12883 1935 aa18.22■□□□□ 0.51
SCLT1-209ENST00000511426 TAF1P21675 1872 aa18.22■□□□□ 0.51
SCLT1-209ENST00000511426 SNAP23O00161 211 aa18.22■□□□□ 0.51
SCLT1-209ENST00000511426 PSMA5P28066 241 aa18.22■□□□□ 0.51
SCLT1-209ENST00000511426 WASHC4Q2M389 1173 aa18.22■□□□□ 0.51
SCLT1-209ENST00000511426 PI16Q6UXB8 463 aa18.22■□□□□ 0.51
SCLT1-209ENST00000511426 PALD1Q9ULE6 856 aa18.22■□□□□ 0.51
SCLT1-209ENST00000511426 IDH1O75874 414 aaKnown RBP18.21■□□□□ 0.51
SCLT1-209ENST00000511426 SLC9C2Q5TAH2 1124 aa18.21■□□□□ 0.51
SCLT1-209ENST00000511426 CREB3L3Q68CJ9 461 aa18.21■□□□□ 0.51
SCLT1-209ENST00000511426 STYK1Q6J9G0 422 aa18.21■□□□□ 0.51
SCLT1-209ENST00000511426 DEFB132Q7Z7B7 95 aa18.21■□□□□ 0.51
SCLT1-209ENST00000511426 ZGPATQ8N5A5 531 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms