RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 NAP1L4Q99733 375 aaKnown RBP11.44□□□□□ -0.58
POLR2J3-215ENST00000511313 KRT23Q9C075 422 aa11.44□□□□□ -0.58
POLR2J3-215ENST00000511313 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.44□□□□□ -0.58
POLR2J3-215ENST00000511313 SHPRHQ149N8 1683 aa11.44□□□□□ -0.58
POLR2J3-215ENST00000511313 CDC45O75419 566 aa11.44□□□□□ -0.58
POLR2J3-215ENST00000511313 CYP7A1P22680 504 aa11.44□□□□□ -0.58
POLR2J3-215ENST00000511313 MCM2P49736 904 aa11.44□□□□□ -0.58
POLR2J3-215ENST00000511313 TEX11Q8IYF3 940 aa11.44□□□□□ -0.58
POLR2J3-215ENST00000511313 FAM89AQ96GI7 184 aa11.44□□□□□ -0.58
POLR2J3-215ENST00000511313 TTC41PQ6P2S7 1318 aa11.44□□□□□ -0.58
POLR2J3-215ENST00000511313 MAGEB6P1A0A0J9YX57 407 aa11.44□□□□□ -0.58
POLR2J3-215ENST00000511313 PCP11498 1178 aaKnown RBP11.44□□□□□ -0.58
POLR2J3-215ENST00000511313 DPEP1P16444 411 aa11.44□□□□□ -0.58
POLR2J3-215ENST00000511313 FBLN1P23142 703 aa11.44□□□□□ -0.58
POLR2J3-215ENST00000511313 RARSP54136 660 aaKnown RBP11.44□□□□□ -0.58
POLR2J3-215ENST00000511313 SF3B3Q15393 1217 aaKnown RBP11.44□□□□□ -0.58
POLR2J3-215ENST00000511313 PRPF40BQ6NWY9 871 aaKnown RBP11.44□□□□□ -0.58
POLR2J3-215ENST00000511313 IFT172Q9UG01 1749 aa11.44□□□□□ -0.58
POLR2J3-215ENST00000511313 SUPT16HQ9Y5B9 1047 aaKnown RBP11.44□□□□□ -0.58
POLR2J3-215ENST00000511313 USP16Q9Y5T5 823 aa11.44□□□□□ -0.58
POLR2J3-215ENST00000511313 SMCR8Q8TEV9 937 aaPredicted RBP11.43□□□□□ -0.58
POLR2J3-215ENST00000511313 ZEB2O60315 1214 aa11.43□□□□□ -0.58
POLR2J3-215ENST00000511313 ZBED4O75132 1171 aa11.43□□□□□ -0.58
POLR2J3-215ENST00000511313 INHBEP58166 350 aa11.43□□□□□ -0.58
POLR2J3-215ENST00000511313 FSTL1Q12841 308 aa11.43□□□□□ -0.58
POLR2J3-215ENST00000511313 APBB1IPQ7Z5R6 666 aaPredicted RBP11.43□□□□□ -0.58
POLR2J3-215ENST00000511313 MRPL50Q8N5N7 158 aaKnown RBP11.43□□□□□ -0.58
POLR2J3-215ENST00000511313 CTCFLQ8NI51 663 aaPredicted RBP11.43□□□□□ -0.58
POLR2J3-215ENST00000511313 GOPCQ9HD26 462 aa11.43□□□□□ -0.58
POLR2J3-215ENST00000511313 PRKAG2Q9UGJ0 569 aa11.43□□□□□ -0.58
POLR2J3-215ENST00000511313 SWAP70Q9UH65 585 aa11.43□□□□□ -0.58
POLR2J3-215ENST00000511313 FDX1P10109 184 aa11.43□□□□□ -0.58
POLR2J3-215ENST00000511313 FASTKD5Q7L8L6 764 aaKnown RBP11.43□□□□□ -0.58
POLR2J3-215ENST00000511313 ZNF341Q9BYN7 854 aa11.43□□□□□ -0.58
POLR2J3-215ENST00000511313 FAM208AQ9UK61 1670 aaKnown RBP11.43□□□□□ -0.58
POLR2J3-215ENST00000511313 NEURL1BA8MQ27 555 aa11.42□□□□□ -0.58
POLR2J3-215ENST00000511313 VAMP4O75379 141 aa11.42□□□□□ -0.58
POLR2J3-215ENST00000511313 CALM1P0DP23 149 aa11.42□□□□□ -0.58
POLR2J3-215ENST00000511313 CALM2P0DP24 149 aa11.42□□□□□ -0.58
POLR2J3-215ENST00000511313 CALM3P0DP25 149 aa11.42□□□□□ -0.58
POLR2J3-215ENST00000511313 RGS3P49796 1198 aa11.42□□□□□ -0.58
POLR2J3-215ENST00000511313 HDLBPQ00341 1268 aaKnown RBP11.42□□□□□ -0.58
POLR2J3-215ENST00000511313 HOOK1Q9UJC3 728 aaKnown RBP11.42□□□□□ -0.58
POLR2J3-215ENST00000511313 UBXN2AP68543 259 aa11.42□□□□□ -0.58
POLR2J3-215ENST00000511313 ZC3H15Q8WU90 426 aaKnown RBP11.42□□□□□ -0.58
POLR2J3-215ENST00000511313 FHDC1Q9C0D6 1143 aaPredicted RBP11.42□□□□□ -0.58
POLR2J3-215ENST00000511313 SIGLEC1Q9BZZ2 1709 aa11.42□□□□□ -0.58
POLR2J3-215ENST00000511313 APLP1P51693 650 aa11.42□□□□□ -0.58
POLR2J3-215ENST00000511313 LINC00116Q8NCU8 138 aa11.42□□□□□ -0.58
POLR2J3-215ENST00000511313 SRP68Q9UHB9 627 aaKnown RBP11.42□□□□□ -0.58
POLR2J3-215ENST00000511313 TTF2Q9UNY4 1162 aaKnown RBP11.42□□□□□ -0.58
POLR2J3-215ENST00000511313 LDHDQ86WU2 507 aa11.41□□□□□ -0.58
POLR2J3-215ENST00000511313 PSMD1Q99460 953 aa11.41□□□□□ -0.58
POLR2J3-215ENST00000511313 CCDC96Q2M329 555 aa11.41□□□□□ -0.58
POLR2J3-215ENST00000511313 SLC10A5Q5PT55 438 aa11.41□□□□□ -0.58
POLR2J3-215ENST00000511313 MFSD14BQ5SR56 506 aa11.41□□□□□ -0.58
POLR2J3-215ENST00000511313 ANO2Q9NQ90 1003 aa11.41□□□□□ -0.58
POLR2J3-215ENST00000511313 RAD50Q92878 1312 aa11.41□□□□□ -0.58
POLR2J3-215ENST00000511313 PRR5LQ6MZQ0 368 aa11.4□□□□□ -0.58
POLR2J3-215ENST00000511313 B4GALNT3Q6L9W6 998 aa11.4□□□□□ -0.58
POLR2J3-215ENST00000511313 GTF2IP78347 998 aa11.4□□□□□ -0.58
POLR2J3-215ENST00000511313 CHADLQ6NUI6 762 aa11.4□□□□□ -0.58
POLR2J3-215ENST00000511313 NBPF11Q86T75 865 aa11.4□□□□□ -0.58
POLR2J3-215ENST00000511313 ESR2Q92731 530 aa11.4□□□□□ -0.58
POLR2J3-215ENST00000511313 MTIF3Q9H2K0 278 aaKnown RBP11.4□□□□□ -0.58
POLR2J3-215ENST00000511313 NOL7Q9UMY1 257 aaKnown RBP11.4□□□□□ -0.58
POLR2J3-215ENST00000511313 GOLGA6L6A8MZA4 724 aa11.4□□□□□ -0.59
POLR2J3-215ENST00000511313 MAP2K1Q02750 393 aaPredicted RBP11.4□□□□□ -0.59
POLR2J3-215ENST00000511313 STRIP1Q5VSL9 837 aa11.4□□□□□ -0.59
POLR2J3-215ENST00000511313 FOXP4Q8IVH2 680 aaPredicted RBP11.4□□□□□ -0.59
POLR2J3-215ENST00000511313 CHURC1Q8WUH1 139 aa11.4□□□□□ -0.59
POLR2J3-215ENST00000511313 PLA2G12BQ9BX93 195 aa11.4□□□□□ -0.59
POLR2J3-215ENST00000511313 RPAP1Q9BWH6 1393 aaPredicted RBP11.4□□□□□ -0.59
POLR2J3-215ENST00000511313 NRDCO43847 1150 aa11.39□□□□□ -0.59
POLR2J3-215ENST00000511313 DKC1O60832 514 aaKnown RBP eCLIP11.39□□□□□ -0.59
POLR2J3-215ENST00000511313 GYS1P13807 737 aa11.39□□□□□ -0.59
POLR2J3-215ENST00000511313 BMS1Q14692 1282 aaKnown RBP11.39□□□□□ -0.59
POLR2J3-215ENST00000511313 SAMD1Q6SPF0 538 aaPredicted RBP11.39□□□□□ -0.59
POLR2J3-215ENST00000511313 GPC2Q8N158 579 aa11.39□□□□□ -0.59
POLR2J3-215ENST00000511313 ZNF526Q8TF50 670 aaPredicted RBP11.39□□□□□ -0.59
POLR2J3-215ENST00000511313 BCL9LQ86UU0 1499 aa11.39□□□□□ -0.59
POLR2J3-215ENST00000511313 NUTM1Q86Y26 1132 aa11.39□□□□□ -0.59
POLR2J3-215ENST00000511313 TRMT44Q8IYL2 757 aaKnown RBP11.39□□□□□ -0.59
POLR2J3-215ENST00000511313 SENP3-EIF4A1A0A087X0R7 540 aa11.39□□□□□ -0.59
POLR2J3-215ENST00000511313 COA7Q96BR5 231 aa11.39□□□□□ -0.59
POLR2J3-215ENST00000511313 CATIPQ7Z7H3 387 aa11.39□□□□□ -0.59
POLR2J3-215ENST00000511313 RBM46Q8TBY0 533 aaKnown RBP11.39□□□□□ -0.59
POLR2J3-215ENST00000511313 ZFYVE28Q9HCC9 887 aa11.39□□□□□ -0.59
POLR2J3-215ENST00000511313 CLSTN1O94985 981 aa11.38□□□□□ -0.59
POLR2J3-215ENST00000511313 ZNF76P36508 570 aa11.38□□□□□ -0.59
POLR2J3-215ENST00000511313 KRT26Q7Z3Y9 468 aa11.38□□□□□ -0.59
POLR2J3-215ENST00000511313 C8orf58Q8NAV2 365 aa11.38□□□□□ -0.59
POLR2J3-215ENST00000511313 TMEM87AQ8NBN3 555 aa11.38□□□□□ -0.59
POLR2J3-215ENST00000511313 HMG20BQ9P0W2 317 aa11.38□□□□□ -0.59
POLR2J3-215ENST00000511313 CAMTA2O94983 1202 aa11.38□□□□□ -0.59
POLR2J3-215ENST00000511313 DPF2Q92785 391 aa11.38□□□□□ -0.59
POLR2J3-215ENST00000511313 KAT14Q9H8E8 782 aa11.38□□□□□ -0.59
POLR2J3-215ENST00000511313 H3BQV1 296 aa11.38□□□□□ -0.59
POLR2J3-215ENST00000511313 KIF4BQ2VIQ3 1234 aa11.38□□□□□ -0.59
POLR2J3-215ENST00000511313 IFFO2Q5TF58 517 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms