RNA–Protein interactions for RNA: ENST00000511129.2

SCARB2-205, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-205ENST00000511129 SLC6A14Q9UN76 642 aa7.35□□□□□ -1.23
SCARB2-205ENST00000511129 RSF1Q96T23 1441 aaPredicted RBP7.35□□□□□ -1.23
SCARB2-205ENST00000511129 TOP2AP11388 1531 aaKnown RBP7.34□□□□□ -1.23
SCARB2-205ENST00000511129 ZBTB42B2RXF5 422 aa7.34□□□□□ -1.23
SCARB2-205ENST00000511129 J3QW42 95 aa7.34□□□□□ -1.23
SCARB2-205ENST00000511129 EPXP11678 715 aa7.34□□□□□ -1.23
SCARB2-205ENST00000511129 HOXD8P13378 290 aaPredicted RBP7.34□□□□□ -1.23
SCARB2-205ENST00000511129 USPL1Q5W0Q7 1092 aa7.34□□□□□ -1.23
SCARB2-205ENST00000511129 ELMSAN1Q6PJG2 1045 aa7.34□□□□□ -1.23
SCARB2-205ENST00000511129 CCDC74AQ96AQ1 378 aa7.34□□□□□ -1.23
SCARB2-205ENST00000511129 PRDM2Q13029 1718 aa7.34□□□□□ -1.23
SCARB2-205ENST00000511129 MSTNO14793 375 aa7.33□□□□□ -1.24
SCARB2-205ENST00000511129 GADD45BO75293 160 aaPredicted RBP7.33□□□□□ -1.24
SCARB2-205ENST00000511129 KIF4AO95239 1232 aa7.33□□□□□ -1.24
SCARB2-205ENST00000511129 AMPD1P23109 780 aa7.33□□□□□ -1.24
SCARB2-205ENST00000511129 GALNT12Q8IXK2 581 aa7.33□□□□□ -1.24
SCARB2-205ENST00000511129 FBF1Q8TES7 1133 aa7.33□□□□□ -1.24
SCARB2-205ENST00000511129 GIPC2Q8TF65 315 aa7.33□□□□□ -1.24
SCARB2-205ENST00000511129 FOXD4L4Q8WXT5 416 aaPredicted RBP7.33□□□□□ -1.24
SCARB2-205ENST00000511129 SALL4Q9UJQ4 1053 aa7.33□□□□□ -1.24
SCARB2-205ENST00000511129 WWC3Q9ULE0 1092 aa7.33□□□□□ -1.24
SCARB2-205ENST00000511129 LAMC3Q9Y6N6 1575 aa7.33□□□□□ -1.24
SCARB2-205ENST00000511129 PRPF40AO75400 957 aaKnown RBP7.32□□□□□ -1.24
SCARB2-205ENST00000511129 ITGAEP38570 1179 aa7.32□□□□□ -1.24
SCARB2-205ENST00000511129 XPCQ01831 940 aaPredicted RBP7.32□□□□□ -1.24
SCARB2-205ENST00000511129 COL13A1Q5TAT6 717 aaPredicted RBP7.32□□□□□ -1.24
SCARB2-205ENST00000511129 SPOCK3Q9BQ16 436 aa7.32□□□□□ -1.24
SCARB2-205ENST00000511129 PPP4R2Q9NY27 417 aa7.32□□□□□ -1.24
SCARB2-205ENST00000511129 RGS9O75916 674 aaPredicted RBP7.31□□□□□ -1.24
SCARB2-205ENST00000511129 SMNDC1O75940 238 aaKnown RBP eCLIP7.31□□□□□ -1.24
SCARB2-205ENST00000511129 RBM25P49756 843 aaKnown RBP7.31□□□□□ -1.24
SCARB2-205ENST00000511129 SNRPNP63162 240 aaKnown RBP7.31□□□□□ -1.24
SCARB2-205ENST00000511129 PSAPL1Q6NUJ1 521 aa7.31□□□□□ -1.24
SCARB2-205ENST00000511129 C1orf229Q6ZS94 237 aaPredicted RBP7.31□□□□□ -1.24
SCARB2-205ENST00000511129 FBXO33Q7Z6M2 555 aa7.31□□□□□ -1.24
SCARB2-205ENST00000511129 CEP120Q8N960 986 aa7.31□□□□□ -1.24
SCARB2-205ENST00000511129 NPHS2Q9NP85 383 aa7.31□□□□□ -1.24
SCARB2-205ENST00000511129 SPG7Q9UQ90 795 aa7.31□□□□□ -1.24
SCARB2-205ENST00000511129 FAM177BA6PVY3 158 aa7.3□□□□□ -1.24
SCARB2-205ENST00000511129 SHISA8B8ZZ34 492 aa7.3□□□□□ -1.24
SCARB2-205ENST00000511129 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.3□□□□□ -1.24
SCARB2-205ENST00000511129 CHSY3Q70JA7 882 aa7.3□□□□□ -1.24
SCARB2-205ENST00000511129 EPS8L3Q8TE67 593 aaKnown RBP7.3□□□□□ -1.24
SCARB2-205ENST00000511129 NUDT8Q8WV74 236 aa7.3□□□□□ -1.24
SCARB2-205ENST00000511129 PLD4Q96BZ4 506 aa7.3□□□□□ -1.24
SCARB2-205ENST00000511129 BTBD6Q96KE9 485 aa7.3□□□□□ -1.24
SCARB2-205ENST00000511129 FRMD6Q96NE9 622 aa7.3□□□□□ -1.24
SCARB2-205ENST00000511129 OSMRQ99650 979 aa7.3□□□□□ -1.24
SCARB2-205ENST00000511129 MDFIQ99750 246 aa7.3□□□□□ -1.24
SCARB2-205ENST00000511129 SMG9Q9H0W8 520 aaKnown RBP7.3□□□□□ -1.24
SCARB2-205ENST00000511129 EHD4Q9H223 541 aa7.3□□□□□ -1.24
SCARB2-205ENST00000511129 FRRS1LQ9P0K9 344 aa7.3□□□□□ -1.24
SCARB2-205ENST00000511129 RBM47A0AV96 593 aaKnown RBP7.29□□□□□ -1.24
SCARB2-205ENST00000511129 PROCP04070 461 aa7.29□□□□□ -1.24
SCARB2-205ENST00000511129 PERM1Q5SV97 790 aa7.29□□□□□ -1.24
SCARB2-205ENST00000511129 CEP135Q66GS9 1140 aa7.29□□□□□ -1.24
SCARB2-205ENST00000511129 SETDB2Q96T68 719 aa7.29□□□□□ -1.24
SCARB2-205ENST00000511129 DUSP9Q99956 384 aaKnown RBP7.29□□□□□ -1.24
SCARB2-205ENST00000511129 PBX4Q9BYU1 374 aa7.29□□□□□ -1.24
SCARB2-205ENST00000511129 RRAGCQ9HB90 399 aa7.29□□□□□ -1.24
SCARB2-205ENST00000511129 JPH1Q9HDC5 661 aaPredicted RBP7.29□□□□□ -1.24
SCARB2-205ENST00000511129 LATS2Q9NRM7 1088 aa7.29□□□□□ -1.24
SCARB2-205ENST00000511129 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.29□□□□□ -1.24
SCARB2-205ENST00000511129 A0A1W2PP55 124 aa7.28□□□□□ -1.24
SCARB2-205ENST00000511129 E9PSI1 815 aa7.28□□□□□ -1.24
SCARB2-205ENST00000511129 GIPC1O14908 333 aa7.28□□□□□ -1.24
SCARB2-205ENST00000511129 ADAM23O75077 832 aa7.28□□□□□ -1.24
SCARB2-205ENST00000511129 ZNF16P17020 682 aaPredicted RBP7.28□□□□□ -1.24
SCARB2-205ENST00000511129 KIAA0319Q5VV43 1072 aa7.28□□□□□ -1.24
SCARB2-205ENST00000511129 ZKSCAN3Q9BRR0 538 aa7.28□□□□□ -1.24
SCARB2-205ENST00000511129 RASSF4Q9H2L5 321 aa7.28□□□□□ -1.24
SCARB2-205ENST00000511129 LIN7BQ9HAP6 207 aa7.28□□□□□ -1.24
SCARB2-205ENST00000511129 MRS2Q9HD23 443 aa7.28□□□□□ -1.24
SCARB2-205ENST00000511129 DZANK1Q9NVP4 752 aa7.28□□□□□ -1.24
SCARB2-205ENST00000511129 PARP2Q9UGN5 583 aa7.28□□□□□ -1.24
SCARB2-205ENST00000511129 NAGPAQ9UK23 515 aa7.28□□□□□ -1.24
SCARB2-205ENST00000511129 TRAK1Q9UPV9 953 aa7.28□□□□□ -1.24
SCARB2-205ENST00000511129 PDE2AO00408 941 aaPredicted RBP7.27□□□□□ -1.25
SCARB2-205ENST00000511129 LILRB5O75023 590 aa7.27□□□□□ -1.25
SCARB2-205ENST00000511129 GNA15P30679 374 aa7.27□□□□□ -1.25
SCARB2-205ENST00000511129 ATP11AP98196 1134 aa7.27□□□□□ -1.25
SCARB2-205ENST00000511129 TAGLNQ01995 201 aaKnown RBP7.27□□□□□ -1.25
SCARB2-205ENST00000511129 PSMD2Q13200 908 aa7.27□□□□□ -1.25
SCARB2-205ENST00000511129 PEAR1Q5VY43 1037 aaPredicted RBP7.27□□□□□ -1.25
SCARB2-205ENST00000511129 PI16Q6UXB8 463 aa7.27□□□□□ -1.25
SCARB2-205ENST00000511129 TTC9Q92623 222 aa7.27□□□□□ -1.25
SCARB2-205ENST00000511129 LPIN3Q9BQK8 851 aa7.27□□□□□ -1.25
SCARB2-205ENST00000511129 SUV39H2Q9H5I1 410 aa7.27□□□□□ -1.25
SCARB2-205ENST00000511129 MKL2Q9ULH7 1088 aa7.27□□□□□ -1.25
SCARB2-205ENST00000511129 STARD13Q9Y3M8 1113 aa7.27□□□□□ -1.25
SCARB2-205ENST00000511129 M0R082 166 aa7.26□□□□□ -1.25
SCARB2-205ENST00000511129 TRPA1O75762 1119 aa7.26□□□□□ -1.25
SCARB2-205ENST00000511129 ACPPP15309 386 aa7.26□□□□□ -1.25
SCARB2-205ENST00000511129 GDF6Q6KF10 455 aaPredicted RBP7.26□□□□□ -1.25
SCARB2-205ENST00000511129 DHX37Q8IY37 1157 aaKnown RBP7.26□□□□□ -1.25
SCARB2-205ENST00000511129 CACTIN-AS1Q8N1I8 211 aa7.26□□□□□ -1.25
SCARB2-205ENST00000511129 TMEM102Q8N9M5 508 aaPredicted RBP7.26□□□□□ -1.25
SCARB2-205ENST00000511129 ZNF417Q8TAU3 575 aa7.26□□□□□ -1.25
SCARB2-205ENST00000511129 ASAP3Q8TDY4 903 aa7.26□□□□□ -1.25
SCARB2-205ENST00000511129 ZNF587Q96SQ5 575 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms