RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 PHOX2BQ99453 314 aa8.95□□□□□ -0.98
CLCN3-207ENST00000511092 CDX2Q99626 313 aaPredicted RBP8.95□□□□□ -0.98
CLCN3-207ENST00000511092 ZNF646O15015 1829 aaPredicted RBP8.94□□□□□ -0.98
CLCN3-207ENST00000511092 CFHP08603 1231 aa8.94□□□□□ -0.98
CLCN3-207ENST00000511092 COPS2P61201 443 aa8.94□□□□□ -0.98
CLCN3-207ENST00000511092 PRPF40BQ6NWY9 871 aaKnown RBP8.94□□□□□ -0.98
CLCN3-207ENST00000511092 KRI1Q8N9T8 703 aaKnown RBP8.94□□□□□ -0.98
CLCN3-207ENST00000511092 NECAB3Q96P71 396 aaPredicted RBP8.94□□□□□ -0.98
CLCN3-207ENST00000511092 GDF15Q99988 308 aa8.94□□□□□ -0.98
CLCN3-207ENST00000511092 GBA2Q9HCG7 927 aaPredicted RBP8.94□□□□□ -0.98
CLCN3-207ENST00000511092 PCDHB3Q9Y5E6 796 aa8.94□□□□□ -0.98
CLCN3-207ENST00000511092 NR2E3Q9Y5X4 410 aa8.94□□□□□ -0.98
CLCN3-207ENST00000511092 FASNP49327 2511 aaKnown RBP8.94□□□□□ -0.98
CLCN3-207ENST00000511092 DCHS1Q96JQ0 3298 aa8.93□□□□□ -0.98
CLCN3-207ENST00000511092 DDX11L8A8MPP1 907 aa8.93□□□□□ -0.98
CLCN3-207ENST00000511092 FOXK2Q01167 660 aa8.93□□□□□ -0.98
CLCN3-207ENST00000511092 NFIXQ14938 502 aa8.93□□□□□ -0.98
CLCN3-207ENST00000511092 UBE2Q1Q7Z7E8 422 aa8.93□□□□□ -0.98
CLCN3-207ENST00000511092 USP48Q86UV5 1035 aa8.93□□□□□ -0.98
CLCN3-207ENST00000511092 RDH13Q8NBN7 331 aa8.93□□□□□ -0.98
CLCN3-207ENST00000511092 MYLIPQ8WY64 445 aa8.93□□□□□ -0.98
CLCN3-207ENST00000511092 CNTNAP4Q9C0A0 1308 aa8.92□□□□□ -0.98
CLCN3-207ENST00000511092 ZPR1O75312 459 aa8.92□□□□□ -0.98
CLCN3-207ENST00000511092 PPP1R18Q6NYC8 613 aa8.92□□□□□ -0.98
CLCN3-207ENST00000511092 UHRF1Q96T88 793 aaPredicted RBP8.92□□□□□ -0.98
CLCN3-207ENST00000511092 EPHX3Q9H6B9 360 aa8.92□□□□□ -0.98
CLCN3-207ENST00000511092 MAST4O15021 2626 aa8.91□□□□□ -0.98
CLCN3-207ENST00000511092 FAM86C2PA6NEL3 165 aa8.91□□□□□ -0.98
CLCN3-207ENST00000511092 ACTN4O43707 911 aaKnown RBP8.91□□□□□ -0.98
CLCN3-207ENST00000511092 SERPINB2P05120 415 aa8.91□□□□□ -0.98
CLCN3-207ENST00000511092 HIRAP54198 1017 aaPredicted RBP8.91□□□□□ -0.98
CLCN3-207ENST00000511092 NHLH1Q02575 133 aa8.91□□□□□ -0.98
CLCN3-207ENST00000511092 FKBP4Q02790 459 aaKnown RBP eCLIP8.91□□□□□ -0.98
CLCN3-207ENST00000511092 SULF1Q8IWU6 871 aa8.91□□□□□ -0.98
CLCN3-207ENST00000511092 CD99L2Q8TCZ2 262 aa8.91□□□□□ -0.98
CLCN3-207ENST00000511092 ZC3H15Q8WU90 426 aaKnown RBP8.91□□□□□ -0.98
CLCN3-207ENST00000511092 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.91□□□□□ -0.98
CLCN3-207ENST00000511092 COL2A1P02458 1487 aaPredicted RBP8.9□□□□□ -0.98
CLCN3-207ENST00000511092 BMP8BP34820 402 aa8.9□□□□□ -0.98
CLCN3-207ENST00000511092 IARSP41252 1262 aaKnown RBP8.9□□□□□ -0.98
CLCN3-207ENST00000511092 MAP3K11Q16584 847 aa8.9□□□□□ -0.98
CLCN3-207ENST00000511092 USPL1Q5W0Q7 1092 aa8.9□□□□□ -0.98
CLCN3-207ENST00000511092 TDHQ8IZJ6 230 aa8.9□□□□□ -0.98
CLCN3-207ENST00000511092 C11orf16Q9NQ32 467 aa8.9□□□□□ -0.98
CLCN3-207ENST00000511092 ADARB2Q9NS39 739 aaKnown RBP8.9□□□□□ -0.98
CLCN3-207ENST00000511092 PGAP2Q9UHJ9 254 aa8.9□□□□□ -0.98
CLCN3-207ENST00000511092 V9GY48 417 aaPredicted RBP8.9□□□□□ -0.98
CLCN3-207ENST00000511092 GPR179Q6PRD1 2367 aa8.9□□□□□ -0.99
CLCN3-207ENST00000511092 CD163L1Q9NR16 1453 aa8.89□□□□□ -0.99
CLCN3-207ENST00000511092 CYP27B1O15528 508 aa8.89□□□□□ -0.99
CLCN3-207ENST00000511092 RC3H1Q5TC82 1133 aaKnown RBP8.89□□□□□ -0.99
CLCN3-207ENST00000511092 FAM109BQ6ICB4 259 aaPredicted RBP8.89□□□□□ -0.99
CLCN3-207ENST00000511092 BLOC1S3Q6QNY0 202 aa8.89□□□□□ -0.99
CLCN3-207ENST00000511092 CDC37L1Q7L3B6 337 aa8.89□□□□□ -0.99
CLCN3-207ENST00000511092 USHBP1Q8N6Y0 703 aa8.89□□□□□ -0.99
CLCN3-207ENST00000511092 NKX2-3Q8TAU0 364 aa8.89□□□□□ -0.99
CLCN3-207ENST00000511092 HTATIP2Q9BUP3 242 aa8.89□□□□□ -0.99
CLCN3-207ENST00000511092 TMUB1Q9BVT8 246 aa8.89□□□□□ -0.99
CLCN3-207ENST00000511092 TPRP12270 2363 aaKnown RBP8.88□□□□□ -0.99
CLCN3-207ENST00000511092 TTC21BQ7Z4L5 1316 aa8.88□□□□□ -0.99
CLCN3-207ENST00000511092 SSC5DA1L4H1 1573 aa8.88□□□□□ -0.99
CLCN3-207ENST00000511092 SHTN1A0MZ66 631 aa8.88□□□□□ -0.99
CLCN3-207ENST00000511092 ADM5C9JUS6 153 aa8.88□□□□□ -0.99
CLCN3-207ENST00000511092 ZMYND10O75800 440 aa8.88□□□□□ -0.99
CLCN3-207ENST00000511092 GGCXP38435 758 aa8.88□□□□□ -0.99
CLCN3-207ENST00000511092 LAPTM4AQ15012 233 aa8.88□□□□□ -0.99
CLCN3-207ENST00000511092 CCDC93Q567U6 631 aa8.88□□□□□ -0.99
CLCN3-207ENST00000511092 C2orf69Q8N8R5 385 aa8.88□□□□□ -0.99
CLCN3-207ENST00000511092 C7orf43Q8WVR3 580 aa8.88□□□□□ -0.99
CLCN3-207ENST00000511092 ATG3Q9NT62 314 aa8.88□□□□□ -0.99
CLCN3-207ENST00000511092 GPRC5DQ9NZD1 345 aa8.88□□□□□ -0.99
CLCN3-207ENST00000511092 PTCH2Q9Y6C5 1203 aa8.88□□□□□ -0.99
CLCN3-207ENST00000511092 MDM2Q00987 491 aaPredicted RBP8.87□□□□□ -0.99
CLCN3-207ENST00000511092 SLC9C1Q4G0N8 1177 aa8.87□□□□□ -0.99
CLCN3-207ENST00000511092 TMEM31Q5JXX7 168 aa8.87□□□□□ -0.99
CLCN3-207ENST00000511092 SH3TC2Q8TF17 1288 aa8.87□□□□□ -0.99
CLCN3-207ENST00000511092 PRKD2Q9BZL6 878 aa8.87□□□□□ -0.99
CLCN3-207ENST00000511092 ZMYND8Q9ULU4 1186 aaPredicted RBP8.87□□□□□ -0.99
CLCN3-207ENST00000511092 PCDH11XQ9BZA7 1347 aa8.86□□□□□ -0.99
CLCN3-207ENST00000511092 PCDH11YQ9BZA8 1340 aa8.86□□□□□ -0.99
CLCN3-207ENST00000511092 EIF6P56537 245 aaKnown RBP8.86□□□□□ -0.99
CLCN3-207ENST00000511092 RALYQ9UKM9 306 aaKnown RBP8.86□□□□□ -0.99
CLCN3-207ENST00000511092 SNED1Q8TER0 1413 aa8.86□□□□□ -0.99
CLCN3-207ENST00000511092 TAF1P21675 1872 aa8.85□□□□□ -0.99
CLCN3-207ENST00000511092 ZNF697Q5TEC3 545 aa8.85□□□□□ -0.99
CLCN3-207ENST00000511092 CFHR5Q9BXR6 569 aa8.85□□□□□ -0.99
CLCN3-207ENST00000511092 CABP1Q9NZU7 370 aa8.85□□□□□ -0.99
CLCN3-207ENST00000511092 LAMB1P07942 1786 aa8.84□□□□□ -0.99
CLCN3-207ENST00000511092 NR1I2O75469 434 aa8.84□□□□□ -0.99
CLCN3-207ENST00000511092 FOSL2P15408 326 aa8.84□□□□□ -0.99
CLCN3-207ENST00000511092 MAGEA10P43363 369 aaPredicted RBP8.84□□□□□ -0.99
CLCN3-207ENST00000511092 GCGRP47871 477 aa8.84□□□□□ -0.99
CLCN3-207ENST00000511092 TM4SF4P48230 202 aa8.84□□□□□ -0.99
CLCN3-207ENST00000511092 MTFR1Q15390 333 aa8.84□□□□□ -0.99
CLCN3-207ENST00000511092 PUS10Q3MIT2 529 aaKnown RBP8.84□□□□□ -0.99
CLCN3-207ENST00000511092 SOGA3Q5TF21 947 aa8.84□□□□□ -0.99
CLCN3-207ENST00000511092 EFCC1Q9HA90 598 aa8.84□□□□□ -0.99
CLCN3-207ENST00000511092 REV3LO60673 3130 aa8.84□□□□□ -0.99
CLCN3-207ENST00000511092 KIF7Q2M1P5 1343 aa8.83□□□□□ -1
CLCN3-207ENST00000511092 SYN1P17600 705 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms