RNA–Protein interactions for RNA: ENST00000510948.1

SMAD1-208, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-208ENST00000510948 HYAL2Q12891 473 aa6.5□□□□□ -1.37
SMAD1-208ENST00000510948 GRIN2CQ14957 1233 aa6.5□□□□□ -1.37
SMAD1-208ENST00000510948 NOC4LQ9BVI4 516 aaKnown RBP6.5□□□□□ -1.37
SMAD1-208ENST00000510948 TANGO6Q9C0B7 1094 aa6.5□□□□□ -1.37
SMAD1-208ENST00000510948 CUEDC1Q9NWM3 386 aaPredicted RBP6.5□□□□□ -1.37
SMAD1-208ENST00000510948 INPP5FQ9Y2H2 1132 aa6.5□□□□□ -1.37
SMAD1-208ENST00000510948 PCDHGB7Q9Y5F8 929 aa6.5□□□□□ -1.37
SMAD1-208ENST00000510948 ZNF608Q9ULD9 1512 aaPredicted RBP6.5□□□□□ -1.37
SMAD1-208ENST00000510948 KIF4AO95239 1232 aa6.49□□□□□ -1.37
SMAD1-208ENST00000510948 XRCC5P13010 732 aaKnown RBP6.49□□□□□ -1.37
SMAD1-208ENST00000510948 HOXD8P13378 290 aaPredicted RBP6.49□□□□□ -1.37
SMAD1-208ENST00000510948 PLAURQ03405 335 aa6.49□□□□□ -1.37
SMAD1-208ENST00000510948 PRPF40BQ6NWY9 871 aaKnown RBP6.49□□□□□ -1.37
SMAD1-208ENST00000510948 ERMP1Q7Z2K6 904 aa6.49□□□□□ -1.37
SMAD1-208ENST00000510948 C3orf58Q8NDZ4 430 aa6.49□□□□□ -1.37
SMAD1-208ENST00000510948 BHMTQ93088 406 aa6.49□□□□□ -1.37
SMAD1-208ENST00000510948 KIFC2Q96AC6 838 aa6.49□□□□□ -1.37
SMAD1-208ENST00000510948 ABHD17AQ96GS6 310 aa6.49□□□□□ -1.37
SMAD1-208ENST00000510948 OSMRQ99650 979 aa6.49□□□□□ -1.37
SMAD1-208ENST00000510948 SLC30A3Q99726 388 aa6.49□□□□□ -1.37
SMAD1-208ENST00000510948 LIN7BQ9HAP6 207 aa6.49□□□□□ -1.37
SMAD1-208ENST00000510948 ZFYVE1Q9HBF4 777 aa6.49□□□□□ -1.37
SMAD1-208ENST00000510948 SENP2Q9HC62 589 aa6.49□□□□□ -1.37
SMAD1-208ENST00000510948 PRKAG2Q9UGJ0 569 aa6.49□□□□□ -1.37
SMAD1-208ENST00000510948 ATXN7L1Q9ULK2 861 aaPredicted RBP6.49□□□□□ -1.37
SMAD1-208ENST00000510948 GRIN2BQ13224 1484 aa6.48□□□□□ -1.37
SMAD1-208ENST00000510948 TNIKQ9UKE5 1360 aa6.48□□□□□ -1.37
SMAD1-208ENST00000510948 TMEM238LA0A1B0GVL6 79 aa6.48□□□□□ -1.37
SMAD1-208ENST00000510948 FCGRTP55899 365 aa6.48□□□□□ -1.37
SMAD1-208ENST00000510948 NEUROD1Q13562 356 aa6.48□□□□□ -1.37
SMAD1-208ENST00000510948 COL13A1Q5TAT6 717 aaPredicted RBP6.48□□□□□ -1.37
SMAD1-208ENST00000510948 DHX32Q7L7V1 743 aaKnown RBP6.48□□□□□ -1.37
SMAD1-208ENST00000510948 VPS37DQ86XT2 251 aa6.48□□□□□ -1.37
SMAD1-208ENST00000510948 CEP120Q8N960 986 aa6.48□□□□□ -1.37
SMAD1-208ENST00000510948 ANKRD24Q8TF21 1146 aa6.48□□□□□ -1.37
SMAD1-208ENST00000510948 GMLQ99445 158 aa6.48□□□□□ -1.37
SMAD1-208ENST00000510948 RSRP1Q9BUV0 290 aa6.48□□□□□ -1.37
SMAD1-208ENST00000510948 TTF2Q9UNY4 1162 aaKnown RBP6.48□□□□□ -1.37
SMAD1-208ENST00000510948 PHF24Q9UPV7 400 aa6.48□□□□□ -1.37
SMAD1-208ENST00000510948 IGF1RP08069 1367 aa6.47□□□□□ -1.37
SMAD1-208ENST00000510948 ATP2B1P20020 1258 aa6.47□□□□□ -1.37
SMAD1-208ENST00000510948 CD33P20138 364 aa6.47□□□□□ -1.37
SMAD1-208ENST00000510948 ITGA6P23229 1130 aa6.47□□□□□ -1.37
SMAD1-208ENST00000510948 FAM182BQ5T319 152 aa6.47□□□□□ -1.37
SMAD1-208ENST00000510948 DTHD1Q6ZMT9 781 aa6.47□□□□□ -1.37
SMAD1-208ENST00000510948 CCNJLQ8IV13 435 aa6.47□□□□□ -1.37
SMAD1-208ENST00000510948 GTPBP3Q969Y2 492 aaKnown RBP6.47□□□□□ -1.37
SMAD1-208ENST00000510948 ZNF837Q96EG3 531 aaPredicted RBP6.47□□□□□ -1.37
SMAD1-208ENST00000510948 SPACA7Q96KW9 195 aa6.47□□□□□ -1.37
SMAD1-208ENST00000510948 TCF12Q99081 682 aa6.47□□□□□ -1.37
SMAD1-208ENST00000510948 ZKSCAN3Q9BRR0 538 aa6.47□□□□□ -1.37
SMAD1-208ENST00000510948 ABCB6Q9NP58 842 aa6.47□□□□□ -1.37
SMAD1-208ENST00000510948 COPRSQ9NQ92 184 aa6.47□□□□□ -1.37
SMAD1-208ENST00000510948 PPM1HQ9ULR3 514 aa6.47□□□□□ -1.37
SMAD1-208ENST00000510948 AKAP2Q9Y2D5 859 aa6.47□□□□□ -1.37
SMAD1-208ENST00000510948 CEP162Q5TB80 1403 aa6.47□□□□□ -1.37
SMAD1-208ENST00000510948 SNAPC4Q5SXM2 1469 aa6.47□□□□□ -1.37
SMAD1-208ENST00000510948 MAGI1Q96QZ7 1491 aaPredicted RBP6.47□□□□□ -1.37
SMAD1-208ENST00000510948 TDRD9Q8NDG6 1382 aaKnown RBP6.46□□□□□ -1.37
SMAD1-208ENST00000510948 LOC102724428A0A0B4J2F2 783 aa6.46□□□□□ -1.38
SMAD1-208ENST00000510948 DNAJA1P31689 397 aaKnown RBP6.46□□□□□ -1.38
SMAD1-208ENST00000510948 NRLP54845 237 aa6.46□□□□□ -1.38
SMAD1-208ENST00000510948 SIK1P57059 783 aa6.46□□□□□ -1.38
SMAD1-208ENST00000510948 ARID5AQ03989 594 aa6.46□□□□□ -1.38
SMAD1-208ENST00000510948 CCDC85BQ15834 202 aaPredicted RBP6.46□□□□□ -1.38
SMAD1-208ENST00000510948 RAB44Q7Z6P3 723 aaPredicted RBP6.46□□□□□ -1.38
SMAD1-208ENST00000510948 RELL1Q8IUW5 271 aa6.46□□□□□ -1.38
SMAD1-208ENST00000510948 TRIM47Q96LD4 638 aa6.46□□□□□ -1.38
SMAD1-208ENST00000510948 CNTNAP3BQ96NU0 1288 aa6.46□□□□□ -1.38
SMAD1-208ENST00000510948 OXCT2Q9BYC2 517 aaPredicted RBP6.46□□□□□ -1.38
SMAD1-208ENST00000510948 CNTNAP3Q9BZ76 1288 aa6.46□□□□□ -1.38
SMAD1-208ENST00000510948 DZANK1Q9NVP4 752 aa6.46□□□□□ -1.38
SMAD1-208ENST00000510948 NFKBIEO00221 500 aa6.45□□□□□ -1.38
SMAD1-208ENST00000510948 RLBP1P12271 317 aa6.45□□□□□ -1.38
SMAD1-208ENST00000510948 ACPPP15309 386 aa6.45□□□□□ -1.38
SMAD1-208ENST00000510948 FGFR3P22607 806 aa6.45□□□□□ -1.38
SMAD1-208ENST00000510948 PWP1Q13610 501 aa6.45□□□□□ -1.38
SMAD1-208ENST00000510948 FOXR1Q6PIV2 292 aa6.45□□□□□ -1.38
SMAD1-208ENST00000510948 SV2BQ7L1I2 683 aa6.45□□□□□ -1.38
SMAD1-208ENST00000510948 TRPM4Q8TD43 1214 aa6.45□□□□□ -1.38
SMAD1-208ENST00000510948 NSUN5Q96P11 429 aaKnown RBP6.45□□□□□ -1.38
SMAD1-208ENST00000510948 TRERF1Q96PN7 1200 aa6.45□□□□□ -1.38
SMAD1-208ENST00000510948 KBTBD4Q9NVX7 518 aa6.45□□□□□ -1.38
SMAD1-208ENST00000510948 AQRO60306 1485 aaKnown RBP eCLIP6.45□□□□□ -1.38
SMAD1-208ENST00000510948 CHD1O14646 1710 aa6.45□□□□□ -1.38
SMAD1-208ENST00000510948 CARMIL1Q5VZK9 1371 aa6.44□□□□□ -1.38
SMAD1-208ENST00000510948 FHAD1B1AJZ9 1412 aa6.44□□□□□ -1.38
SMAD1-208ENST00000510948 ZBTB42B2RXF5 422 aa6.44□□□□□ -1.38
SMAD1-208ENST00000510948 TRPA1O75762 1119 aa6.44□□□□□ -1.38
SMAD1-208ENST00000510948 GRIA4P48058 902 aa6.44□□□□□ -1.38
SMAD1-208ENST00000510948 GJA8P48165 433 aa6.44□□□□□ -1.38
SMAD1-208ENST00000510948 GPLD1P80108 840 aa6.44□□□□□ -1.38
SMAD1-208ENST00000510948 CTBSQ01459 385 aa6.44□□□□□ -1.38
SMAD1-208ENST00000510948 MAP3K10Q02779 954 aa6.44□□□□□ -1.38
SMAD1-208ENST00000510948 PCSK7Q16549 785 aa6.44□□□□□ -1.38
SMAD1-208ENST00000510948 TMEM102Q8N9M5 508 aaPredicted RBP6.44□□□□□ -1.38
SMAD1-208ENST00000510948 NXPE3Q969Y0 559 aa6.44□□□□□ -1.38
SMAD1-208ENST00000510948 ARMC5Q96C12 935 aa6.44□□□□□ -1.38
SMAD1-208ENST00000510948 CEP44Q9C0F1 390 aa6.44□□□□□ -1.38
SMAD1-208ENST00000510948 BHLHE41Q9C0J9 482 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms