RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-208ENST00000510676 PODXL2Q9NZ53 605 aa14.38□□□□□ -0.11
PTCD2-208ENST00000510676 RRP7AQ9Y3A4 280 aaKnown RBP14.38□□□□□ -0.11
PTCD2-208ENST00000510676 KNSTRNQ9Y448 316 aa14.38□□□□□ -0.11
PTCD2-208ENST00000510676 WNT10BO00744 389 aa14.37□□□□□ -0.11
PTCD2-208ENST00000510676 MCM10Q7L590 875 aa14.37□□□□□ -0.11
PTCD2-208ENST00000510676 LRP10Q7Z4F1 713 aa14.37□□□□□ -0.11
PTCD2-208ENST00000510676 NKX2-3Q8TAU0 364 aa14.37□□□□□ -0.11
PTCD2-208ENST00000510676 SH3TC2Q8TF17 1288 aa14.37□□□□□ -0.11
PTCD2-208ENST00000510676 CELF1Q92879 486 aaKnown RBP14.37□□□□□ -0.11
PTCD2-208ENST00000510676 ZC3H12CQ9C0D7 883 aaKnown RBP14.37□□□□□ -0.11
PTCD2-208ENST00000510676 ANGEL1Q9UNK9 670 aaKnown RBP14.37□□□□□ -0.11
PTCD2-208ENST00000510676 MYL6BP14649 208 aa14.36□□□□□ -0.11
PTCD2-208ENST00000510676 Q7L0L9 218 aa14.36□□□□□ -0.11
PTCD2-208ENST00000510676 NLRP10Q86W26 655 aa14.36□□□□□ -0.11
PTCD2-208ENST00000510676 SH3TC1Q8TE82 1336 aa14.36□□□□□ -0.11
PTCD2-208ENST00000510676 MYCP01106 439 aaPredicted RBP14.35□□□□□ -0.11
PTCD2-208ENST00000510676 BMP8BP34820 402 aa14.35□□□□□ -0.11
PTCD2-208ENST00000510676 GJA8P48165 433 aa14.35□□□□□ -0.11
PTCD2-208ENST00000510676 TAF7Q15545 349 aaPredicted RBP14.35□□□□□ -0.11
PTCD2-208ENST00000510676 LRIT3Q3SXY7 679 aa14.35□□□□□ -0.11
PTCD2-208ENST00000510676 CLMNQ96JQ2 1002 aa14.35□□□□□ -0.11
PTCD2-208ENST00000510676 COL1A1P02452 1464 aaPredicted RBP14.35□□□□□ -0.11
PTCD2-208ENST00000510676 COL4A1P02462 1669 aa14.34□□□□□ -0.11
PTCD2-208ENST00000510676 HTATSF1O43719 755 aaKnown RBP14.34□□□□□ -0.11
PTCD2-208ENST00000510676 PRKG1Q13976 671 aa14.34□□□□□ -0.11
PTCD2-208ENST00000510676 SF3B3Q15393 1217 aaKnown RBP14.34□□□□□ -0.11
PTCD2-208ENST00000510676 RTF1Q92541 710 aaKnown RBP14.34□□□□□ -0.11
PTCD2-208ENST00000510676 RSPH6AQ9H0K4 717 aa14.34□□□□□ -0.11
PTCD2-208ENST00000510676 STAP2Q9UGK3 403 aa14.34□□□□□ -0.11
PTCD2-208ENST00000510676 USP17L3A6NCW0 530 aa14.33□□□□□ -0.12
PTCD2-208ENST00000510676 USP17L4A6NCW7 530 aa14.33□□□□□ -0.12
PTCD2-208ENST00000510676 U2SURPO15042 1029 aaKnown RBP14.33□□□□□ -0.12
PTCD2-208ENST00000510676 GNRH1P01148 92 aa14.33□□□□□ -0.12
PTCD2-208ENST00000510676 GJB1P08034 283 aa14.33□□□□□ -0.12
PTCD2-208ENST00000510676 GJA5P36382 358 aa14.33□□□□□ -0.12
PTCD2-208ENST00000510676 MMP14P50281 582 aa14.33□□□□□ -0.12
PTCD2-208ENST00000510676 MTFR1Q15390 333 aa14.33□□□□□ -0.12
PTCD2-208ENST00000510676 USP17L1Q7RTZ2 530 aa14.33□□□□□ -0.12
PTCD2-208ENST00000510676 APOBEC3FQ8IUX4 373 aaKnown RBP14.33□□□□□ -0.12
PTCD2-208ENST00000510676 GDF15Q99988 308 aa14.33□□□□□ -0.12
PTCD2-208ENST00000510676 FOXD4L1Q9NU39 408 aa14.33□□□□□ -0.12
PTCD2-208ENST00000510676 TRMT112Q9UI30 125 aaKnown RBP14.33□□□□□ -0.12
PTCD2-208ENST00000510676 SSC5DA1L4H1 1573 aa14.32□□□□□ -0.12
PTCD2-208ENST00000510676 PRKAR2BP31323 418 aa14.32□□□□□ -0.12
PTCD2-208ENST00000510676 PRMT2P55345 433 aa14.32□□□□□ -0.12
PTCD2-208ENST00000510676 HSP90AB3PQ58FF7 597 aa14.32□□□□□ -0.12
PTCD2-208ENST00000510676 PODNQ7Z5L7 613 aa14.32□□□□□ -0.12
PTCD2-208ENST00000510676 FZD1Q9UP38 647 aa14.32□□□□□ -0.12
PTCD2-208ENST00000510676 COL9A1P20849 921 aa14.31□□□□□ -0.12
PTCD2-208ENST00000510676 EIF4A1P60842 406 aaKnown RBP14.31□□□□□ -0.12
PTCD2-208ENST00000510676 ZBED3Q96IU2 234 aaPredicted RBP14.31□□□□□ -0.12
PTCD2-208ENST00000510676 MIS18AQ9NYP9 233 aa14.31□□□□□ -0.12
PTCD2-208ENST00000510676 BDP1A6H8Y1 2624 aa14.31□□□□□ -0.12
PTCD2-208ENST00000510676 PIEZO1Q92508 2521 aa14.31□□□□□ -0.12
PTCD2-208ENST00000510676 G3V3G9 751 aa14.3□□□□□ -0.12
PTCD2-208ENST00000510676 UFL1O94874 794 aa14.3□□□□□ -0.12
PTCD2-208ENST00000510676 DCTN1Q14203 1278 aa14.3□□□□□ -0.12
PTCD2-208ENST00000510676 PDIA6Q15084 440 aa14.3□□□□□ -0.12
PTCD2-208ENST00000510676 DCAF8Q5TAQ9 597 aa14.3□□□□□ -0.12
PTCD2-208ENST00000510676 OGFOD1Q8N543 542 aa14.3□□□□□ -0.12
PTCD2-208ENST00000510676 MS4A4AQ96JQ5 239 aa14.3□□□□□ -0.12
PTCD2-208ENST00000510676 CDH23Q9H251 3354 aa14.3□□□□□ -0.12
PTCD2-208ENST00000510676 PPP1R12BO60237 982 aaPredicted RBP14.29□□□□□ -0.12
PTCD2-208ENST00000510676 EVI5O60447 810 aa14.29□□□□□ -0.12
PTCD2-208ENST00000510676 RPS8P62241 208 aaKnown RBP14.29□□□□□ -0.12
PTCD2-208ENST00000510676 DACT2Q5SW24 774 aa14.29□□□□□ -0.12
PTCD2-208ENST00000510676 ZFYVE28Q9HCC9 887 aa14.29□□□□□ -0.12
PTCD2-208ENST00000510676 GGA1Q9UJY5 639 aa14.29□□□□□ -0.12
PTCD2-208ENST00000510676 SASH1O94885 1247 aa14.28□□□□□ -0.12
PTCD2-208ENST00000510676 FARP2O94887 1054 aaPredicted RBP14.28□□□□□ -0.12
PTCD2-208ENST00000510676 PLA2G5P39877 138 aa14.28□□□□□ -0.12
PTCD2-208ENST00000510676 LACTBP83111 547 aaPredicted RBP14.28□□□□□ -0.12
PTCD2-208ENST00000510676 RPTORQ8N122 1335 aa14.28□□□□□ -0.12
PTCD2-208ENST00000510676 PNISRQ8TF01 805 aaKnown RBP14.28□□□□□ -0.12
PTCD2-208ENST00000510676 MYO3BQ8WXR4 1341 aa14.28□□□□□ -0.12
PTCD2-208ENST00000510676 ARHGAP39Q9C0H5 1083 aa14.28□□□□□ -0.12
PTCD2-208ENST00000510676 DEFB129Q9H1M3 183 aa14.28□□□□□ -0.12
PTCD2-208ENST00000510676 TAF1CQ15572 869 aaPredicted RBP14.27□□□□□ -0.13
PTCD2-208ENST00000510676 BRI3BPQ8WY22 251 aa14.27□□□□□ -0.13
PTCD2-208ENST00000510676 PPP2R3BQ9Y5P8 575 aa14.27□□□□□ -0.13
PTCD2-208ENST00000510676 CCL5P13501 91 aa14.26□□□□□ -0.13
PTCD2-208ENST00000510676 CAPN2P17655 700 aa14.26□□□□□ -0.13
PTCD2-208ENST00000510676 BCAMP50895 628 aa14.26□□□□□ -0.13
PTCD2-208ENST00000510676 THUMPD2Q9BTF0 503 aaKnown RBP14.26□□□□□ -0.13
PTCD2-208ENST00000510676 ANKIB1Q9P2G1 1089 aa14.26□□□□□ -0.13
PTCD2-208ENST00000510676 TLR2O60603 784 aa14.25□□□□□ -0.13
PTCD2-208ENST00000510676 KIF22Q14807 665 aa14.25□□□□□ -0.13
PTCD2-208ENST00000510676 PROSER3Q2NL68 480 aa14.25□□□□□ -0.13
PTCD2-208ENST00000510676 STRIP1Q5VSL9 837 aa14.25□□□□□ -0.13
PTCD2-208ENST00000510676 FAM109BQ6ICB4 259 aaPredicted RBP14.25□□□□□ -0.13
PTCD2-208ENST00000510676 ANKRD13AQ8IZ07 590 aa14.25□□□□□ -0.13
PTCD2-208ENST00000510676 U2AF1L4Q8WU68 220 aaKnown RBP14.25□□□□□ -0.13
PTCD2-208ENST00000510676 GUCD1Q96NT3 240 aa14.25□□□□□ -0.13
PTCD2-208ENST00000510676 NCOR1O75376 2440 aa14.25□□□□□ -0.13
PTCD2-208ENST00000510676 ZSWIM8A7E2V4 1837 aa14.25□□□□□ -0.13
PTCD2-208ENST00000510676 GRK4P32298 578 aa14.24□□□□□ -0.13
PTCD2-208ENST00000510676 IREB2P48200 963 aaKnown RBP14.24□□□□□ -0.13
PTCD2-208ENST00000510676 SUPT20HL1Q3ZLR7 823 aa14.24□□□□□ -0.13
PTCD2-208ENST00000510676 TDHQ8IZJ6 230 aa14.24□□□□□ -0.13
PTCD2-208ENST00000510676 MXD3Q9BW11 206 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms