RNA–Protein interactions for RNA: ENST00000507411.5

CLDND1-214, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 815 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-214ENST00000507411 PRAMEF18Q5VWM3 479 aa10.46□□□□□ -0.73
CLDND1-214ENST00000507411 FAM109BQ6ICB4 259 aaPredicted RBP10.46□□□□□ -0.73
CLDND1-214ENST00000507411 ARMC9Q7Z3E5 817 aa10.46□□□□□ -0.73
CLDND1-214ENST00000507411 ARIH1Q9Y4X5 557 aaPredicted RBP10.46□□□□□ -0.73
CLDND1-214ENST00000507411 ZNF646O15015 1829 aaPredicted RBP10.46□□□□□ -0.74
CLDND1-214ENST00000507411 NCOR1O75376 2440 aa10.46□□□□□ -0.74
CLDND1-214ENST00000507411 BDP1A6H8Y1 2624 aa10.46□□□□□ -0.74
CLDND1-214ENST00000507411 GJB1P08034 283 aa10.45□□□□□ -0.74
CLDND1-214ENST00000507411 DBNDD1Q9H9R9 158 aa10.45□□□□□ -0.74
CLDND1-214ENST00000507411 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.45□□□□□ -0.74
CLDND1-214ENST00000507411 SCAF8Q9UPN6 1271 aaKnown RBP10.45□□□□□ -0.74
CLDND1-214ENST00000507411 ECM2O94769 699 aaPredicted RBP10.44□□□□□ -0.74
CLDND1-214ENST00000507411 PRKG1Q13976 671 aa10.44□□□□□ -0.74
CLDND1-214ENST00000507411 HCN4Q9Y3Q4 1203 aa10.44□□□□□ -0.74
CLDND1-214ENST00000507411 ZBTB48P10074 688 aaPredicted RBP10.43□□□□□ -0.74
CLDND1-214ENST00000507411 SULT6B1Q6IMI4 303 aa10.43□□□□□ -0.74
CLDND1-214ENST00000507411 ZNF790Q6PG37 636 aa10.43□□□□□ -0.74
CLDND1-214ENST00000507411 SP8Q8IXZ3 490 aa10.43□□□□□ -0.74
CLDND1-214ENST00000507411 SLC10A4Q96EP9 437 aa10.43□□□□□ -0.74
CLDND1-214ENST00000507411 FMNL2Q96PY5 1086 aa10.43□□□□□ -0.74
CLDND1-214ENST00000507411 OCEL1Q9H607 264 aa10.43□□□□□ -0.74
CLDND1-214ENST00000507411 ZMYND8Q9ULU4 1186 aaPredicted RBP10.43□□□□□ -0.74
CLDND1-214ENST00000507411 TAF1P21675 1872 aa10.42□□□□□ -0.74
CLDND1-214ENST00000507411 SLC24A1O60721 1099 aa10.42□□□□□ -0.74
CLDND1-214ENST00000507411 CCL5P13501 91 aa10.42□□□□□ -0.74
CLDND1-214ENST00000507411 IRX5P78411 483 aaPredicted RBP10.42□□□□□ -0.74
CLDND1-214ENST00000507411 LDLRAD1Q5T700 205 aa10.42□□□□□ -0.74
CLDND1-214ENST00000507411 ALYREFQ86V81 257 aaKnown RBP10.42□□□□□ -0.74
CLDND1-214ENST00000507411 TESK2Q96S53 571 aa10.42□□□□□ -0.74
CLDND1-214ENST00000507411 UBE2OQ9C0C9 1292 aaKnown RBP10.42□□□□□ -0.74
CLDND1-214ENST00000507411 RNF208Q9H0X6 261 aa10.42□□□□□ -0.74
CLDND1-214ENST00000507411 RTL9Q8NET4 1388 aa10.41□□□□□ -0.74
CLDND1-214ENST00000507411 ABCC4O15439 1325 aa10.41□□□□□ -0.74
CLDND1-214ENST00000507411 MUC6Q6W4X9 2439 aa10.41□□□□□ -0.74
CLDND1-214ENST00000507411 BBOX1O75936 387 aa10.41□□□□□ -0.74
CLDND1-214ENST00000507411 MAGEA10P43363 369 aaPredicted RBP10.41□□□□□ -0.74
CLDND1-214ENST00000507411 ZNF280AP59817 542 aaPredicted RBP10.41□□□□□ -0.74
CLDND1-214ENST00000507411 KIF22Q14807 665 aa10.41□□□□□ -0.74
CLDND1-214ENST00000507411 HLFQ16534 295 aa10.41□□□□□ -0.74
CLDND1-214ENST00000507411 WASHC4Q2M389 1173 aa10.41□□□□□ -0.74
CLDND1-214ENST00000507411 ZNF697Q5TEC3 545 aa10.41□□□□□ -0.74
CLDND1-214ENST00000507411 C3orf67Q6ZVT6 689 aa10.41□□□□□ -0.74
CLDND1-214ENST00000507411 C7orf61Q8IZ16 206 aa10.41□□□□□ -0.74
CLDND1-214ENST00000507411 WNK4Q96J92 1243 aa10.41□□□□□ -0.74
CLDND1-214ENST00000507411 CDX2Q99626 313 aaPredicted RBP10.41□□□□□ -0.74
CLDND1-214ENST00000507411 KCNQ5Q9NR82 932 aa10.41□□□□□ -0.74
CLDND1-214ENST00000507411 ANGEL1Q9UNK9 670 aaKnown RBP10.41□□□□□ -0.74
CLDND1-214ENST00000507411 ECE2O60344 883 aa10.4□□□□□ -0.74
CLDND1-214ENST00000507411 PRMT2P55345 433 aa10.4□□□□□ -0.74
CLDND1-214ENST00000507411 U2AF1L4Q8WU68 220 aaKnown RBP10.4□□□□□ -0.74
CLDND1-214ENST00000507411 CARD14Q9BXL6 1004 aa10.4□□□□□ -0.74
CLDND1-214ENST00000507411 RIMBP2O15034 1052 aa10.39□□□□□ -0.75
CLDND1-214ENST00000507411 VIL1P09327 827 aaKnown RBP10.39□□□□□ -0.75
CLDND1-214ENST00000507411 NECTIN2Q92692 538 aa10.39□□□□□ -0.75
CLDND1-214ENST00000507411 NLRP3Q96P20 1036 aa10.39□□□□□ -0.75
CLDND1-214ENST00000507411 C1QTNF1Q9BXJ1 281 aa10.39□□□□□ -0.75
CLDND1-214ENST00000507411 MYOZ2Q9NPC6 264 aa10.39□□□□□ -0.75
CLDND1-214ENST00000507411 BIN2Q9UBW5 565 aaPredicted RBP10.39□□□□□ -0.75
CLDND1-214ENST00000507411 LAMB1P07942 1786 aa10.39□□□□□ -0.75
CLDND1-214ENST00000507411 DUOX1Q9NRD9 1551 aa10.39□□□□□ -0.75
CLDND1-214ENST00000507411 IBTKQ9P2D0 1353 aaPredicted RBP10.39□□□□□ -0.75
CLDND1-214ENST00000507411 DDX60Q8IY21 1712 aaKnown RBP10.38□□□□□ -0.75
CLDND1-214ENST00000507411 GNRH1P01148 92 aa10.38□□□□□ -0.75
CLDND1-214ENST00000507411 SYN1P17600 705 aa10.38□□□□□ -0.75
CLDND1-214ENST00000507411 GRK4P32298 578 aa10.38□□□□□ -0.75
CLDND1-214ENST00000507411 TEFQ10587 303 aa10.38□□□□□ -0.75
CLDND1-214ENST00000507411 TAF1CQ15572 869 aaPredicted RBP10.38□□□□□ -0.75
CLDND1-214ENST00000507411 DOK7Q18PE1 504 aa10.38□□□□□ -0.75
CLDND1-214ENST00000507411 P2RX7Q99572 595 aaKnown RBP10.38□□□□□ -0.75
CLDND1-214ENST00000507411 PTPN18Q99952 460 aa10.38□□□□□ -0.75
CLDND1-214ENST00000507411 ARHGAP39Q9C0H5 1083 aa10.38□□□□□ -0.75
CLDND1-214ENST00000507411 ZFYVE28Q9HCC9 887 aa10.38□□□□□ -0.75
CLDND1-214ENST00000507411 USP16Q9Y5T5 823 aa10.38□□□□□ -0.75
CLDND1-214ENST00000507411 ALPK3Q96L96 1907 aa10.38□□□□□ -0.75
CLDND1-214ENST00000507411 UBXN2AP68543 259 aa10.37□□□□□ -0.75
CLDND1-214ENST00000507411 AGBL3Q8NEM8 1001 aa10.37□□□□□ -0.75
CLDND1-214ENST00000507411 CLMNQ96JQ2 1002 aa10.37□□□□□ -0.75
CLDND1-214ENST00000507411 ZSWIM8A7E2V4 1837 aa10.36□□□□□ -0.75
CLDND1-214ENST00000507411 C6orf229H3BNL8 230 aa10.36□□□□□ -0.75
CLDND1-214ENST00000507411 SGPL1O95470 568 aa10.36□□□□□ -0.75
CLDND1-214ENST00000507411 USP17L8P0C7I0 530 aa10.36□□□□□ -0.75
CLDND1-214ENST00000507411 FOSL2P15408 326 aa10.36□□□□□ -0.75
CLDND1-214ENST00000507411 GPTP24298 496 aa10.36□□□□□ -0.75
CLDND1-214ENST00000507411 LACTBP83111 547 aaPredicted RBP10.36□□□□□ -0.75
CLDND1-214ENST00000507411 SUSD4Q5VX71 490 aa10.36□□□□□ -0.75
CLDND1-214ENST00000507411 RAET1EQ8TD07 263 aa10.36□□□□□ -0.75
CLDND1-214ENST00000507411 MYLIPQ8WY64 445 aa10.36□□□□□ -0.75
CLDND1-214ENST00000507411 RIPOR2Q9Y4F9 1068 aa10.36□□□□□ -0.75
CLDND1-214ENST00000507411 TESPA1A2RU30 521 aaPredicted RBP10.35□□□□□ -0.75
CLDND1-214ENST00000507411 NBPF26B4DH59 902 aa10.35□□□□□ -0.75
CLDND1-214ENST00000507411 TFRCP02786 760 aaKnown RBP10.35□□□□□ -0.75
CLDND1-214ENST00000507411 NBPF9Q3BBW0 867 aa10.35□□□□□ -0.75
CLDND1-214ENST00000507411 RSBN1LQ6PCB5 846 aaPredicted RBP10.35□□□□□ -0.75
CLDND1-214ENST00000507411 PAWRQ96IZ0 340 aaKnown RBP10.35□□□□□ -0.75
CLDND1-214ENST00000507411 TRIM47Q96LD4 638 aa10.35□□□□□ -0.75
CLDND1-214ENST00000507411 FZD1Q9UP38 647 aa10.35□□□□□ -0.75
CLDND1-214ENST00000507411 SSC5DA1L4H1 1573 aa10.35□□□□□ -0.75
CLDND1-214ENST00000507411 SCN9AQ15858 1988 aa10.34□□□□□ -0.75
CLDND1-214ENST00000507411 G3V3G9 751 aa10.34□□□□□ -0.75
CLDND1-214ENST00000507411 WDHD1O75717 1129 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms