RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 PTPRAP18433 802 aa5.9□□□□□ -1.46
HMGB3P15-201ENST00000507326 CD97P48960 835 aa5.9□□□□□ -1.46
HMGB3P15-201ENST00000507326 DUOXA2Q1HG44 320 aa5.9□□□□□ -1.46
HMGB3P15-201ENST00000507326 MCTP1Q6DN14 999 aa5.9□□□□□ -1.46
HMGB3P15-201ENST00000507326 KIAA1211Q6ZU35 1233 aa5.9□□□□□ -1.46
HMGB3P15-201ENST00000507326 CEP120Q8N960 986 aa5.9□□□□□ -1.46
HMGB3P15-201ENST00000507326 UBASH3BQ8TF42 649 aa5.9□□□□□ -1.46
HMGB3P15-201ENST00000507326 UTP4Q969X6 686 aaKnown RBP5.9□□□□□ -1.46
HMGB3P15-201ENST00000507326 NUDT16Q96DE0 195 aaKnown RBP5.9□□□□□ -1.46
HMGB3P15-201ENST00000507326 ELP3Q9H9T3 547 aa5.9□□□□□ -1.46
HMGB3P15-201ENST00000507326 SEPT3Q9UH03 358 aa5.9□□□□□ -1.46
HMGB3P15-201ENST00000507326 FAM177BA6PVY3 158 aa5.89□□□□□ -1.47
HMGB3P15-201ENST00000507326 TM4SF5O14894 197 aa5.89□□□□□ -1.47
HMGB3P15-201ENST00000507326 MED26O95402 600 aa5.89□□□□□ -1.47
HMGB3P15-201ENST00000507326 LCE3BQ5TA77 95 aa5.89□□□□□ -1.47
HMGB3P15-201ENST00000507326 ATCAYQ86WG3 371 aa5.89□□□□□ -1.47
HMGB3P15-201ENST00000507326 KLHL23Q8NBE8 558 aa5.89□□□□□ -1.47
HMGB3P15-201ENST00000507326 FOXD4L4Q8WXT5 416 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P15-201ENST00000507326 KLHDC7BQ96G42 594 aa5.89□□□□□ -1.47
HMGB3P15-201ENST00000507326 POP1Q99575 1024 aaKnown RBP5.89□□□□□ -1.47
HMGB3P15-201ENST00000507326 TMEM63CQ9P1W3 806 aa5.89□□□□□ -1.47
HMGB3P15-201ENST00000507326 SLAIN2Q9P270 581 aa5.89□□□□□ -1.47
HMGB3P15-201ENST00000507326 ADAM11O75078 769 aa5.88□□□□□ -1.47
HMGB3P15-201ENST00000507326 COBLO75128 1261 aa5.88□□□□□ -1.47
HMGB3P15-201ENST00000507326 ACPPP15309 386 aa5.88□□□□□ -1.47
HMGB3P15-201ENST00000507326 ATP2B4P23634 1241 aa5.88□□□□□ -1.47
HMGB3P15-201ENST00000507326 PDE12Q6L8Q7 609 aaKnown RBP5.88□□□□□ -1.47
HMGB3P15-201ENST00000507326 ZNF438Q7Z4V0 828 aa5.88□□□□□ -1.47
HMGB3P15-201ENST00000507326 FAM46AQ96IP4 442 aaKnown RBP5.88□□□□□ -1.47
HMGB3P15-201ENST00000507326 C7orf69Q9H7B7 122 aa5.88□□□□□ -1.47
HMGB3P15-201ENST00000507326 SEC31BQ9NQW1 1179 aa5.88□□□□□ -1.47
HMGB3P15-201ENST00000507326 CNTN3Q9P232 1028 aa5.88□□□□□ -1.47
HMGB3P15-201ENST00000507326 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P15-201ENST00000507326 HMX2A2RU54 273 aa5.87□□□□□ -1.47
HMGB3P15-201ENST00000507326 NFIAQ12857 509 aa5.87□□□□□ -1.47
HMGB3P15-201ENST00000507326 UVSSAQ2YD98 709 aa5.87□□□□□ -1.47
HMGB3P15-201ENST00000507326 ZDHHC13Q8IUH4 622 aa5.87□□□□□ -1.47
HMGB3P15-201ENST00000507326 TRIM42Q8IWZ5 723 aa5.87□□□□□ -1.47
HMGB3P15-201ENST00000507326 EDEM1Q92611 657 aa5.87□□□□□ -1.47
HMGB3P15-201ENST00000507326 ADAM19Q9H013 955 aa5.87□□□□□ -1.47
HMGB3P15-201ENST00000507326 H3BRJ5 948 aa5.86□□□□□ -1.47
HMGB3P15-201ENST00000507326 SART1O43290 800 aaKnown RBP5.86□□□□□ -1.47
HMGB3P15-201ENST00000507326 TRPA1O75762 1119 aa5.86□□□□□ -1.47
HMGB3P15-201ENST00000507326 CABP4P57796 275 aa5.86□□□□□ -1.47
HMGB3P15-201ENST00000507326 RNF43Q68DV7 783 aa5.86□□□□□ -1.47
HMGB3P15-201ENST00000507326 C1orf127Q8N9H9 656 aa5.86□□□□□ -1.47
HMGB3P15-201ENST00000507326 PBXIP1Q96AQ6 731 aa5.86□□□□□ -1.47
HMGB3P15-201ENST00000507326 MYRFLQ96LU7 910 aa5.86□□□□□ -1.47
HMGB3P15-201ENST00000507326 ZMYND15Q9H091 742 aa5.86□□□□□ -1.47
HMGB3P15-201ENST00000507326 SALL4Q9UJQ4 1053 aa5.86□□□□□ -1.47
HMGB3P15-201ENST00000507326 A6NHS1 94 aa5.85□□□□□ -1.47
HMGB3P15-201ENST00000507326 KIAA1324LA8MWY0 1029 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P15-201ENST00000507326 CES1P23141 567 aa5.85□□□□□ -1.47
HMGB3P15-201ENST00000507326 IRAK1P51617 712 aa5.85□□□□□ -1.47
HMGB3P15-201ENST00000507326 NLRP12P59046 1061 aa5.85□□□□□ -1.47
HMGB3P15-201ENST00000507326 PIP4K2BP78356 416 aa5.85□□□□□ -1.47
HMGB3P15-201ENST00000507326 DNM1Q05193 864 aaKnown RBP5.85□□□□□ -1.47
HMGB3P15-201ENST00000507326 SLC7A3Q8WY07 619 aa5.85□□□□□ -1.47
HMGB3P15-201ENST00000507326 DBNDD2Q9BQY9 259 aa5.85□□□□□ -1.47
HMGB3P15-201ENST00000507326 KCNF1Q9H3M0 494 aa5.85□□□□□ -1.47
HMGB3P15-201ENST00000507326 OAS3Q9Y6K5 1087 aaKnown RBP5.85□□□□□ -1.47
HMGB3P15-201ENST00000507326 COL17A1Q9UMD9 1497 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P15-201ENST00000507326 NFKBIEO00221 500 aa5.84□□□□□ -1.47
HMGB3P15-201ENST00000507326 PDE2AO00408 941 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P15-201ENST00000507326 RPLP1P05386 114 aaKnown RBP5.84□□□□□ -1.47
HMGB3P15-201ENST00000507326 BMP3P12645 472 aa5.84□□□□□ -1.47
HMGB3P15-201ENST00000507326 GRIK1P39086 918 aa5.84□□□□□ -1.47
HMGB3P15-201ENST00000507326 PREPP48147 710 aa5.84□□□□□ -1.47
HMGB3P15-201ENST00000507326 C8orf34Q49A92 452 aa5.84□□□□□ -1.47
HMGB3P15-201ENST00000507326 FAM20CQ8IXL6 584 aa5.84□□□□□ -1.47
HMGB3P15-201ENST00000507326 HELQQ8TDG4 1101 aa5.84□□□□□ -1.47
HMGB3P15-201ENST00000507326 CCDC97Q96F63 343 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P15-201ENST00000507326 HHIPQ96QV1 700 aa5.84□□□□□ -1.47
HMGB3P15-201ENST00000507326 RUSC1Q9BVN2 902 aa5.84□□□□□ -1.47
HMGB3P15-201ENST00000507326 GGNBP2Q9H3C7 697 aa5.84□□□□□ -1.47
HMGB3P15-201ENST00000507326 OSGEPQ9NPF4 335 aa5.84□□□□□ -1.47
HMGB3P15-201ENST00000507326 DZANK1Q9NVP4 752 aa5.84□□□□□ -1.47
HMGB3P15-201ENST00000507326 PAX4O43316 350 aa5.83□□□□□ -1.48
HMGB3P15-201ENST00000507326 PDGFAP04085 211 aa5.83□□□□□ -1.48
HMGB3P15-201ENST00000507326 PCSK2P16519 638 aa5.83□□□□□ -1.48
HMGB3P15-201ENST00000507326 GP2P55259 537 aaKnown RBP5.83□□□□□ -1.48
HMGB3P15-201ENST00000507326 NOM1Q5C9Z4 860 aaKnown RBP5.83□□□□□ -1.48
HMGB3P15-201ENST00000507326 HGSNATQ68CP4 663 aa5.83□□□□□ -1.48
HMGB3P15-201ENST00000507326 ANKRD34AQ69YU3 496 aa5.83□□□□□ -1.48
HMGB3P15-201ENST00000507326 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P15-201ENST00000507326 BEND4Q6ZU67 534 aa5.83□□□□□ -1.48
HMGB3P15-201ENST00000507326 KRTAP19-1Q8IUB9 90 aa5.83□□□□□ -1.48
HMGB3P15-201ENST00000507326 CLEC10AQ8IUN9 316 aa5.83□□□□□ -1.48
HMGB3P15-201ENST00000507326 TTC16Q8NEE8 873 aa5.83□□□□□ -1.48
HMGB3P15-201ENST00000507326 SHKBP1Q8TBC3 707 aa5.83□□□□□ -1.48
HMGB3P15-201ENST00000507326 WNT8BQ93098 351 aa5.83□□□□□ -1.48
HMGB3P15-201ENST00000507326 RNF208Q9H0X6 261 aa5.83□□□□□ -1.48
HMGB3P15-201ENST00000507326 GOLGA2P5Q9HBQ8 144 aa5.83□□□□□ -1.48
HMGB3P15-201ENST00000507326 PRR19A6NJB7 356 aa5.82□□□□□ -1.48
HMGB3P15-201ENST00000507326 GAS2O43903 313 aaKnown RBP5.82□□□□□ -1.48
HMGB3P15-201ENST00000507326 ADAMTS4O75173 837 aa5.82□□□□□ -1.48
HMGB3P15-201ENST00000507326 SPINK2P20155 84 aa5.82□□□□□ -1.48
HMGB3P15-201ENST00000507326 ARL4DP49703 201 aa5.82□□□□□ -1.48
HMGB3P15-201ENST00000507326 FDX2Q6P4F2 183 aa5.82□□□□□ -1.48
HMGB3P15-201ENST00000507326 INTS5Q6P9B9 1019 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms