RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 SIPA1L3O60292 1781 aaPredicted RBP12.45□□□□□ -0.42
CLCN3-205ENST00000506924 C4BP0C0L5 1744 aa12.45□□□□□ -0.42
CLCN3-205ENST00000506924 PNPLA7Q6ZV29 1317 aa12.44□□□□□ -0.42
CLCN3-205ENST00000506924 HTATSF1O43719 755 aaKnown RBP12.44□□□□□ -0.42
CLCN3-205ENST00000506924 AGERQ15109 404 aa12.44□□□□□ -0.42
CLCN3-205ENST00000506924 ZNF790Q6PG37 636 aa12.44□□□□□ -0.42
CLCN3-205ENST00000506924 DNAJC10Q8IXB1 793 aa12.44□□□□□ -0.42
CLCN3-205ENST00000506924 FOXJ1Q92949 421 aa12.44□□□□□ -0.42
CLCN3-205ENST00000506924 CDV3Q9UKY7 258 aaKnown RBP12.44□□□□□ -0.42
CLCN3-205ENST00000506924 KCPQ6ZWJ8 1503 aa12.43□□□□□ -0.42
CLCN3-205ENST00000506924 APAF1O14727 1248 aa12.43□□□□□ -0.42
CLCN3-205ENST00000506924 RC3H1Q5TC82 1133 aaKnown RBP12.43□□□□□ -0.42
CLCN3-205ENST00000506924 ZNF697Q5TEC3 545 aa12.43□□□□□ -0.42
CLCN3-205ENST00000506924 COL23A1Q86Y22 540 aaPredicted RBP12.43□□□□□ -0.42
CLCN3-205ENST00000506924 FAM9BQ8IZU0 186 aa12.43□□□□□ -0.42
CLCN3-205ENST00000506924 ADAM32Q8TC27 787 aa12.43□□□□□ -0.42
CLCN3-205ENST00000506924 ZNF496Q96IT1 587 aaPredicted RBP12.43□□□□□ -0.42
CLCN3-205ENST00000506924 CASZ1Q86V15 1759 aa12.43□□□□□ -0.42
CLCN3-205ENST00000506924 TAF7Q15545 349 aaPredicted RBP12.42□□□□□ -0.42
CLCN3-205ENST00000506924 C4orf48Q5BLP8 95 aa12.42□□□□□ -0.42
CLCN3-205ENST00000506924 DIEXFQ68CQ4 756 aaKnown RBP12.42□□□□□ -0.42
CLCN3-205ENST00000506924 FAM174AQ8TBP5 190 aa12.42□□□□□ -0.42
CLCN3-205ENST00000506924 TJP1Q07157 1748 aa12.42□□□□□ -0.42
CLCN3-205ENST00000506924 CRKLP46109 303 aaKnown RBP12.41□□□□□ -0.42
CLCN3-205ENST00000506924 VAC14Q08AM6 782 aa12.41□□□□□ -0.42
CLCN3-205ENST00000506924 MSL1Q68DK7 614 aa12.41□□□□□ -0.42
CLCN3-205ENST00000506924 EHBP1Q8NDI1 1231 aa12.41□□□□□ -0.42
CLCN3-205ENST00000506924 LAS1LQ9Y4W2 734 aaKnown RBP12.41□□□□□ -0.42
CLCN3-205ENST00000506924 UBR2Q8IWV8 1755 aa12.41□□□□□ -0.42
CLCN3-205ENST00000506924 COL5A3P25940 1745 aaPredicted RBP12.4□□□□□ -0.42
CLCN3-205ENST00000506924 PRAMEF22A3QJZ6 481 aa12.4□□□□□ -0.42
CLCN3-205ENST00000506924 ERFEQ4G0M1 354 aa12.4□□□□□ -0.42
CLCN3-205ENST00000506924 FMNL2Q96PY5 1086 aa12.4□□□□□ -0.42
CLCN3-205ENST00000506924 SPON1Q9HCB6 807 aa12.4□□□□□ -0.42
CLCN3-205ENST00000506924 MAP4K5Q9Y4K4 846 aa12.4□□□□□ -0.42
CLCN3-205ENST00000506924 UBR3Q6ZT12 1888 aa12.4□□□□□ -0.42
CLCN3-205ENST00000506924 MAGEB6P1A0A0J9YX57 407 aa12.39□□□□□ -0.43
CLCN3-205ENST00000506924 CYP19A1P11511 503 aaPredicted RBP12.39□□□□□ -0.43
CLCN3-205ENST00000506924 LMOD3Q0VAK6 560 aa12.39□□□□□ -0.43
CLCN3-205ENST00000506924 INTS5Q6P9B9 1019 aaKnown RBP12.39□□□□□ -0.43
CLCN3-205ENST00000506924 MYH14Q7Z406 1995 aaKnown RBP12.39□□□□□ -0.43
CLCN3-205ENST00000506924 HEG1Q9ULI3 1381 aa12.39□□□□□ -0.43
CLCN3-205ENST00000506924 ZNF831Q5JPB2 1677 aa12.38□□□□□ -0.43
CLCN3-205ENST00000506924 CNTNAP4Q9C0A0 1308 aa12.38□□□□□ -0.43
CLCN3-205ENST00000506924 QSER1Q2KHR3 1735 aa12.38□□□□□ -0.43
CLCN3-205ENST00000506924 CANXP27824 592 aaKnown RBP12.38□□□□□ -0.43
CLCN3-205ENST00000506924 PIP4K2AP48426 406 aaPredicted RBP12.38□□□□□ -0.43
CLCN3-205ENST00000506924 MTFR1LQ9H019 292 aa12.38□□□□□ -0.43
CLCN3-205ENST00000506924 ALG2Q9H553 416 aa12.38□□□□□ -0.43
CLCN3-205ENST00000506924 TSPYL4Q9UJ04 414 aa12.38□□□□□ -0.43
CLCN3-205ENST00000506924 RTCBQ9Y3I0 505 aaKnown RBP12.38□□□□□ -0.43
CLCN3-205ENST00000506924 USP16Q9Y5T5 823 aa12.38□□□□□ -0.43
CLCN3-205ENST00000506924 SRCAPQ6ZRS2 3230 aa12.37□□□□□ -0.43
CLCN3-205ENST00000506924 RPS6KA4O75676 772 aa12.37□□□□□ -0.43
CLCN3-205ENST00000506924 PRR20EP86478 221 aa12.37□□□□□ -0.43
CLCN3-205ENST00000506924 PRR20CP86479 221 aa12.37□□□□□ -0.43
CLCN3-205ENST00000506924 PRR20DP86480 221 aa12.37□□□□□ -0.43
CLCN3-205ENST00000506924 PRR20BP86481 221 aa12.37□□□□□ -0.43
CLCN3-205ENST00000506924 PRR20AP86496 221 aa12.37□□□□□ -0.43
CLCN3-205ENST00000506924 TRAPPC3LQ5T215 181 aa12.37□□□□□ -0.43
CLCN3-205ENST00000506924 SLC10A4Q96EP9 437 aa12.37□□□□□ -0.43
CLCN3-205ENST00000506924 CDK15Q96Q40 435 aa12.37□□□□□ -0.43
CLCN3-205ENST00000506924 CCDC87Q9NVE4 849 aa12.37□□□□□ -0.43
CLCN3-205ENST00000506924 PPP1R1BQ9UD71 204 aaPredicted RBP12.37□□□□□ -0.43
CLCN3-205ENST00000506924 ZBTB1Q9Y2K1 713 aa12.37□□□□□ -0.43
CLCN3-205ENST00000506924 SIAH2O43255 324 aa12.36□□□□□ -0.43
CLCN3-205ENST00000506924 A1BGP04217 495 aa12.36□□□□□ -0.43
CLCN3-205ENST00000506924 HMGB2P26583 209 aaKnown RBP12.36□□□□□ -0.43
CLCN3-205ENST00000506924 SSFA2P28290 1259 aa12.36□□□□□ -0.43
CLCN3-205ENST00000506924 SEMA3FQ13275 785 aa12.36□□□□□ -0.43
CLCN3-205ENST00000506924 FLAD1Q8NFF5 587 aa12.36□□□□□ -0.43
CLCN3-205ENST00000506924 KDM3BQ7LBC6 1761 aa12.35□□□□□ -0.43
CLCN3-205ENST00000506924 STARD3NLO95772 234 aa12.35□□□□□ -0.43
CLCN3-205ENST00000506924 SNRPA1P09661 255 aaKnown RBP12.35□□□□□ -0.43
CLCN3-205ENST00000506924 RFC4P35249 363 aa12.35□□□□□ -0.43
CLCN3-205ENST00000506924 EIF4A1P60842 406 aaKnown RBP12.35□□□□□ -0.43
CLCN3-205ENST00000506924 NBPF20Q3BBV1 942 aa12.35□□□□□ -0.43
CLCN3-205ENST00000506924 DZIP3Q86Y13 1208 aaKnown RBP12.35□□□□□ -0.43
CLCN3-205ENST00000506924 PKD2L1Q9P0L9 805 aa12.35□□□□□ -0.43
CLCN3-205ENST00000506924 SRP68Q9UHB9 627 aaKnown RBP12.35□□□□□ -0.43
CLCN3-205ENST00000506924 LRP5O75197 1615 aa12.35□□□□□ -0.43
CLCN3-205ENST00000506924 CICQ96RK0 1608 aaPredicted RBP12.34□□□□□ -0.43
CLCN3-205ENST00000506924 POM121CA8CG34 1229 aa12.34□□□□□ -0.43
CLCN3-205ENST00000506924 GDF9O60383 454 aa12.34□□□□□ -0.43
CLCN3-205ENST00000506924 KRT24Q2M2I5 525 aa12.34□□□□□ -0.43
CLCN3-205ENST00000506924 SLC16A10Q8TF71 515 aa12.34□□□□□ -0.43
CLCN3-205ENST00000506924 MRGPRX2Q96LB1 330 aa12.34□□□□□ -0.43
CLCN3-205ENST00000506924 ARXQ96QS3 562 aa12.34□□□□□ -0.43
CLCN3-205ENST00000506924 PCDHB9Q9Y5E1 797 aa12.34□□□□□ -0.43
CLCN3-205ENST00000506924 GLMNQ92990 594 aa12.33□□□□□ -0.44
CLCN3-205ENST00000506924 TEX13AQ9BXU3 409 aaPredicted RBP12.33□□□□□ -0.44
CLCN3-205ENST00000506924 SOS1Q07889 1333 aaPredicted RBP12.33□□□□□ -0.44
CLCN3-205ENST00000506924 CHL1O00533 1208 aa12.32□□□□□ -0.44
CLCN3-205ENST00000506924 GIGYF1O75420 1035 aaPredicted RBP12.32□□□□□ -0.44
CLCN3-205ENST00000506924 POLD1P28340 1107 aa12.32□□□□□ -0.44
CLCN3-205ENST00000506924 NGEFQ8N5V2 710 aa12.32□□□□□ -0.44
CLCN3-205ENST00000506924 C4AP0C0L4 1744 aa12.31□□□□□ -0.44
CLCN3-205ENST00000506924 CCER2I3L3R5 266 aa12.31□□□□□ -0.44
CLCN3-205ENST00000506924 EIF2S2P20042 333 aaKnown RBP12.31□□□□□ -0.44
CLCN3-205ENST00000506924 USPL1Q5W0Q7 1092 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms