RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 PSMD1Q99460 953 aa6.97□□□□□ -1.29
CLDND1-212ENST00000506885 PLVAPQ9BX97 442 aa6.97□□□□□ -1.29
CLDND1-212ENST00000506885 NLRP2Q9NX02 1062 aa6.97□□□□□ -1.29
CLDND1-212ENST00000506885 ZFATQ9P243 1243 aa6.97□□□□□ -1.29
CLDND1-212ENST00000506885 SEPT3Q9UH03 358 aa6.97□□□□□ -1.29
CLDND1-212ENST00000506885 KCNMB2Q9Y691 235 aa6.97□□□□□ -1.29
CLDND1-212ENST00000506885 UBAP1LF5GYI3 381 aa6.96□□□□□ -1.3
CLDND1-212ENST00000506885 ALBP02768 609 aa6.96□□□□□ -1.3
CLDND1-212ENST00000506885 P4HBP07237 508 aaKnown RBP6.96□□□□□ -1.3
CLDND1-212ENST00000506885 SPATA31C1P0DKV0 1188 aa6.96□□□□□ -1.3
CLDND1-212ENST00000506885 ARHGAP4P98171 946 aa6.96□□□□□ -1.3
CLDND1-212ENST00000506885 ECM1Q16610 540 aa6.96□□□□□ -1.3
CLDND1-212ENST00000506885 FAM35AQ86V20 835 aa6.96□□□□□ -1.3
CLDND1-212ENST00000506885 TTC9Q92623 222 aa6.96□□□□□ -1.3
CLDND1-212ENST00000506885 ARMC5Q96C12 935 aa6.96□□□□□ -1.3
CLDND1-212ENST00000506885 TGIF2Q9GZN2 237 aa6.96□□□□□ -1.3
CLDND1-212ENST00000506885 RBSNQ9H1K0 784 aa6.96□□□□□ -1.3
CLDND1-212ENST00000506885 CCSER2Q9H7U1 834 aa6.96□□□□□ -1.3
CLDND1-212ENST00000506885 CAPN10Q9HC96 672 aa6.96□□□□□ -1.3
CLDND1-212ENST00000506885 COBLO75128 1261 aa6.95□□□□□ -1.3
CLDND1-212ENST00000506885 HOXD8P13378 290 aaPredicted RBP6.95□□□□□ -1.3
CLDND1-212ENST00000506885 FKBP4Q02790 459 aaKnown RBP eCLIP6.95□□□□□ -1.3
CLDND1-212ENST00000506885 TRIM28Q13263 835 aaKnown RBP6.95□□□□□ -1.3
CLDND1-212ENST00000506885 SF3B2Q13435 895 aaKnown RBP6.95□□□□□ -1.3
CLDND1-212ENST00000506885 EGFLAMQ63HQ2 1017 aa6.95□□□□□ -1.3
CLDND1-212ENST00000506885 PSAPL1Q6NUJ1 521 aa6.95□□□□□ -1.3
CLDND1-212ENST00000506885 ELMSAN1Q6PJG2 1045 aa6.95□□□□□ -1.3
CLDND1-212ENST00000506885 TMEM87AQ8NBN3 555 aa6.95□□□□□ -1.3
CLDND1-212ENST00000506885 GTF3C2Q8WUA4 911 aaPredicted RBP6.95□□□□□ -1.3
CLDND1-212ENST00000506885 TRIM11Q96F44 468 aa6.95□□□□□ -1.3
CLDND1-212ENST00000506885 SUV39H2Q9H5I1 410 aa6.95□□□□□ -1.3
CLDND1-212ENST00000506885 JPH1Q9HDC5 661 aaPredicted RBP6.95□□□□□ -1.3
CLDND1-212ENST00000506885 FAM13AO94988 1023 aa6.94□□□□□ -1.3
CLDND1-212ENST00000506885 ZMYM1Q5SVZ6 1142 aa6.94□□□□□ -1.3
CLDND1-212ENST00000506885 TTC39BQ5VTQ0 682 aaPredicted RBP6.94□□□□□ -1.3
CLDND1-212ENST00000506885 PDE12Q6L8Q7 609 aaKnown RBP6.94□□□□□ -1.3
CLDND1-212ENST00000506885 GPR152Q8TDT2 470 aa6.94□□□□□ -1.3
CLDND1-212ENST00000506885 GPATCH3Q96I76 525 aa6.94□□□□□ -1.3
CLDND1-212ENST00000506885 NACC1Q96RE7 527 aa6.94□□□□□ -1.3
CLDND1-212ENST00000506885 USP20Q9Y2K6 914 aa6.94□□□□□ -1.3
CLDND1-212ENST00000506885 TBX22Q9Y458 520 aa6.94□□□□□ -1.3
CLDND1-212ENST00000506885 PPME1Q9Y570 386 aa6.94□□□□□ -1.3
CLDND1-212ENST00000506885 APBA3O96018 575 aa6.93□□□□□ -1.3
CLDND1-212ENST00000506885 NID1P14543 1247 aa6.93□□□□□ -1.3
CLDND1-212ENST00000506885 CPB1P15086 417 aa6.93□□□□□ -1.3
CLDND1-212ENST00000506885 TRAPPC3LQ5T215 181 aa6.93□□□□□ -1.3
CLDND1-212ENST00000506885 CACTIN-AS1Q8N1I8 211 aa6.93□□□□□ -1.3
CLDND1-212ENST00000506885 RNF34Q969K3 372 aa6.93□□□□□ -1.3
CLDND1-212ENST00000506885 METTL5Q9NRN9 209 aaKnown RBP6.93□□□□□ -1.3
CLDND1-212ENST00000506885 LOC102724428A0A0B4J2F2 783 aa6.92□□□□□ -1.3
CLDND1-212ENST00000506885 SCO2A0A1W2PP80 73 aa6.92□□□□□ -1.3
CLDND1-212ENST00000506885 PLEKHD1A6NEE1 506 aa6.92□□□□□ -1.3
CLDND1-212ENST00000506885 C1QTNF9BB2RNN3 333 aa6.92□□□□□ -1.3
CLDND1-212ENST00000506885 ZBTB42B2RXF5 422 aa6.92□□□□□ -1.3
CLDND1-212ENST00000506885 ZBTB39O15060 712 aa6.92□□□□□ -1.3
CLDND1-212ENST00000506885 MMP20O60882 483 aa6.92□□□□□ -1.3
CLDND1-212ENST00000506885 GHRHP01286 108 aa6.92□□□□□ -1.3
CLDND1-212ENST00000506885 NPR3P17342 541 aa6.92□□□□□ -1.3
CLDND1-212ENST00000506885 MZF1P28698 734 aaPredicted RBP6.92□□□□□ -1.3
CLDND1-212ENST00000506885 ITGAEP38570 1179 aa6.92□□□□□ -1.3
CLDND1-212ENST00000506885 USP5P45974 858 aa6.92□□□□□ -1.3
CLDND1-212ENST00000506885 SIK1P57059 783 aa6.92□□□□□ -1.3
CLDND1-212ENST00000506885 RAC1P63000 192 aa6.92□□□□□ -1.3
CLDND1-212ENST00000506885 IGBP1P78318 339 aa6.92□□□□□ -1.3
CLDND1-212ENST00000506885 FANCCQ00597 558 aa6.92□□□□□ -1.3
CLDND1-212ENST00000506885 XPCQ01831 940 aaPredicted RBP6.92□□□□□ -1.3
CLDND1-212ENST00000506885 MTMR3Q13615 1198 aa6.92□□□□□ -1.3
CLDND1-212ENST00000506885 GNL2Q13823 731 aaKnown RBP6.92□□□□□ -1.3
CLDND1-212ENST00000506885 COL9A3Q14050 684 aaPredicted RBP6.92□□□□□ -1.3
CLDND1-212ENST00000506885 FAM26DQ5JW98 314 aa6.92□□□□□ -1.3
CLDND1-212ENST00000506885 OR13H1Q8NG92 308 aa6.92□□□□□ -1.3
CLDND1-212ENST00000506885 NUDT8Q8WV74 236 aa6.92□□□□□ -1.3
CLDND1-212ENST00000506885 UBE2Q2Q8WVN8 375 aa6.92□□□□□ -1.3
CLDND1-212ENST00000506885 SPACA7Q96KW9 195 aa6.92□□□□□ -1.3
CLDND1-212ENST00000506885 PIF1Q9H611 641 aa6.92□□□□□ -1.3
CLDND1-212ENST00000506885 METTL14Q9HCE5 456 aaKnown RBP6.92□□□□□ -1.3
CLDND1-212ENST00000506885 MRS2Q9HD23 443 aa6.92□□□□□ -1.3
CLDND1-212ENST00000506885 hCG_2014768A0A024R1R8 64 aa6.91□□□□□ -1.3
CLDND1-212ENST00000506885 AFF1P51825 1210 aaKnown RBP6.91□□□□□ -1.3
CLDND1-212ENST00000506885 FGD1P98174 961 aa6.91□□□□□ -1.3
CLDND1-212ENST00000506885 EHHADHQ08426 723 aa6.91□□□□□ -1.3
CLDND1-212ENST00000506885 HYAL2Q12891 473 aa6.91□□□□□ -1.3
CLDND1-212ENST00000506885 TRIP4Q15650 581 aaPredicted RBP6.91□□□□□ -1.3
CLDND1-212ENST00000506885 PTPROQ16827 1216 aa6.91□□□□□ -1.3
CLDND1-212ENST00000506885 PERM1Q5SV97 790 aa6.91□□□□□ -1.3
CLDND1-212ENST00000506885 XKR5Q6UX68 686 aa6.91□□□□□ -1.3
CLDND1-212ENST00000506885 CD163Q86VB7 1156 aa6.91□□□□□ -1.3
CLDND1-212ENST00000506885 NLGN1Q8N2Q7 840 aa6.91□□□□□ -1.3
CLDND1-212ENST00000506885 DTWD1Q8N5C7 304 aa6.91□□□□□ -1.3
CLDND1-212ENST00000506885 PMFBP1Q8TBY8 1022 aa6.91□□□□□ -1.3
CLDND1-212ENST00000506885 NUDT16Q96DE0 195 aaKnown RBP6.91□□□□□ -1.3
CLDND1-212ENST00000506885 GMLQ99445 158 aa6.91□□□□□ -1.3
CLDND1-212ENST00000506885 ABI2Q9NYB9 513 aaPredicted RBP6.91□□□□□ -1.3
CLDND1-212ENST00000506885 NAGPAQ9UK23 515 aa6.91□□□□□ -1.3
CLDND1-212ENST00000506885 RIPOR2Q9Y4F9 1068 aa6.91□□□□□ -1.3
CLDND1-212ENST00000506885 EIF2AK2P19525 551 aaKnown RBP6.9□□□□□ -1.3
CLDND1-212ENST00000506885 DNAJA1P31689 397 aaKnown RBP6.9□□□□□ -1.3
CLDND1-212ENST00000506885 EIF1AXP47813 144 aaKnown RBP6.9□□□□□ -1.3
CLDND1-212ENST00000506885 AAMPQ13685 434 aa6.9□□□□□ -1.3
CLDND1-212ENST00000506885 C8orf86Q6ZUL3 223 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms