RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 ENGASEQ8NFI3 743 aa18.48■□□□□ 0.55
SCLT1-208ENST00000506368 BCL11BQ9C0K0 894 aaPredicted RBP18.48■□□□□ 0.55
SCLT1-208ENST00000506368 MYO1BO43795 1136 aa18.48■□□□□ 0.55
SCLT1-208ENST00000506368 ZRSR1Q15695 479 aaKnown RBP18.48■□□□□ 0.55
SCLT1-208ENST00000506368 HSP90AB2PQ58FF8 381 aa18.48■□□□□ 0.55
SCLT1-208ENST00000506368 SMARCC2Q8TAQ2 1214 aa18.48■□□□□ 0.55
SCLT1-208ENST00000506368 BRF1Q92994 677 aa18.48■□□□□ 0.55
SCLT1-208ENST00000506368 RFX7Q2KHR2 1363 aa18.47■□□□□ 0.55
SCLT1-208ENST00000506368 TADA3O75528 432 aa18.47■□□□□ 0.55
SCLT1-208ENST00000506368 TNNT3P45378 269 aaPredicted RBP18.47■□□□□ 0.55
SCLT1-208ENST00000506368 MSL3Q8N5Y2 521 aaKnown RBP18.47■□□□□ 0.55
SCLT1-208ENST00000506368 MPHOSPH8Q99549 860 aa18.47■□□□□ 0.55
SCLT1-208ENST00000506368 ZSCAN12O43309 604 aa18.46■□□□□ 0.55
SCLT1-208ENST00000506368 TAF7Q15545 349 aaPredicted RBP18.46■□□□□ 0.55
SCLT1-208ENST00000506368 USPL1Q5W0Q7 1092 aa18.46■□□□□ 0.55
SCLT1-208ENST00000506368 HOMER1Q86YM7 354 aa18.46■□□□□ 0.55
SCLT1-208ENST00000506368 AOPEPQ8N6M6 819 aa18.46■□□□□ 0.55
SCLT1-208ENST00000506368 A0A1W2PQ27 194 aa18.46■□□□□ 0.55
SCLT1-208ENST00000506368 A0A1W2PQ64 194 aa18.46■□□□□ 0.55
SCLT1-208ENST00000506368 A0A1W2PQD8 194 aa18.46■□□□□ 0.55
SCLT1-208ENST00000506368 ADAMTS2O95450 1211 aa18.46■□□□□ 0.55
SCLT1-208ENST00000506368 ZC3H6P61129 1189 aaKnown RBP18.46■□□□□ 0.55
SCLT1-208ENST00000506368 HDGFL1Q5TGJ6 251 aa18.46■□□□□ 0.55
SCLT1-208ENST00000506368 GOLGA6L1Q8N7Z2 621 aa18.46■□□□□ 0.55
SCLT1-208ENST00000506368 LRP6O75581 1613 aa18.46■□□□□ 0.54
SCLT1-208ENST00000506368 GCP02774 474 aa18.45■□□□□ 0.54
SCLT1-208ENST00000506368 TUBB4BP68371 445 aa18.45■□□□□ 0.54
SCLT1-208ENST00000506368 NMIQ13287 307 aaPredicted RBP18.45■□□□□ 0.54
SCLT1-208ENST00000506368 ZSCAN26Q16670 478 aa18.45■□□□□ 0.54
SCLT1-208ENST00000506368 BEND3Q5T5X7 828 aa18.45■□□□□ 0.54
SCLT1-208ENST00000506368 FBXO18Q8NFZ0 1043 aa18.45■□□□□ 0.54
SCLT1-208ENST00000506368 USP54Q70EL1 1684 aa18.45■□□□□ 0.54
SCLT1-208ENST00000506368 CBFA2T2O43439 604 aa18.45■□□□□ 0.54
SCLT1-208ENST00000506368 IVLP07476 585 aa18.45■□□□□ 0.54
SCLT1-208ENST00000506368 ADD1P35611 737 aaKnown RBP18.45■□□□□ 0.54
SCLT1-208ENST00000506368 IRX3P78415 501 aaPredicted RBP18.45■□□□□ 0.54
SCLT1-208ENST00000506368 NOM1Q5C9Z4 860 aaKnown RBP18.45■□□□□ 0.54
SCLT1-208ENST00000506368 ARMCX5Q6P1M9 558 aa18.45■□□□□ 0.54
SCLT1-208ENST00000506368 KRBA2Q6ZNG9 492 aa18.45■□□□□ 0.54
SCLT1-208ENST00000506368 DNAAF4Q8WXU2 420 aa18.45■□□□□ 0.54
SCLT1-208ENST00000506368 IKBKBO14920 756 aa18.44■□□□□ 0.54
SCLT1-208ENST00000506368 HMGB1P09429 215 aaKnown RBP18.44■□□□□ 0.54
SCLT1-208ENST00000506368 ALDH1L1O75891 902 aa18.43■□□□□ 0.54
SCLT1-208ENST00000506368 SMC1AQ14683 1233 aaKnown RBP18.43■□□□□ 0.54
SCLT1-208ENST00000506368 TMC6Q7Z403 805 aa18.43■□□□□ 0.54
SCLT1-208ENST00000506368 MRPS27Q92552 414 aaKnown RBP18.43■□□□□ 0.54
SCLT1-208ENST00000506368 ARFGAP3Q9NP61 516 aa18.43■□□□□ 0.54
SCLT1-208ENST00000506368 SLIT3O75094 1523 aa18.43■□□□□ 0.54
SCLT1-208ENST00000506368 NPHP1O15259 732 aa18.43■□□□□ 0.54
SCLT1-208ENST00000506368 OAS2P29728 719 aaKnown RBP18.43■□□□□ 0.54
SCLT1-208ENST00000506368 ADALQ6DHV7 355 aa18.43■□□□□ 0.54
SCLT1-208ENST00000506368 CC2D1AQ6P1N0 951 aaPredicted RBP18.43■□□□□ 0.54
SCLT1-208ENST00000506368 NEK1Q96PY6 1258 aa18.43■□□□□ 0.54
SCLT1-208ENST00000506368 XPO4Q9C0E2 1151 aaKnown RBP18.43■□□□□ 0.54
SCLT1-208ENST00000506368 NFAT5O94916 1531 aa18.42■□□□□ 0.54
SCLT1-208ENST00000506368 ABCC6O95255 1503 aa18.42■□□□□ 0.54
SCLT1-208ENST00000506368 NBPF7P0C2Y1 421 aaPredicted RBP18.42■□□□□ 0.54
SCLT1-208ENST00000506368 CASQ1P31415 396 aa18.42■□□□□ 0.54
SCLT1-208ENST00000506368 CHRNA2Q15822 529 aa18.42■□□□□ 0.54
SCLT1-208ENST00000506368 MYO1CO00159 1063 aa18.42■□□□□ 0.54
SCLT1-208ENST00000506368 SMC2O95347 1197 aa18.42■□□□□ 0.54
SCLT1-208ENST00000506368 TBC1D8O95759 1140 aa18.42■□□□□ 0.54
SCLT1-208ENST00000506368 FSIP1Q8NA03 581 aa18.42■□□□□ 0.54
SCLT1-208ENST00000506368 RABGGTAQ92696 567 aa18.42■□□□□ 0.54
SCLT1-208ENST00000506368 SMARCE1Q969G3 411 aa18.42■□□□□ 0.54
SCLT1-208ENST00000506368 GOLPH3LQ9H4A5 285 aa18.42■□□□□ 0.54
SCLT1-208ENST00000506368 NCAPD2Q15021 1401 aa18.41■□□□□ 0.54
SCLT1-208ENST00000506368 LTN1O94822 1766 aa18.41■□□□□ 0.54
SCLT1-208ENST00000506368 PFKFB2O60825 505 aa18.41■□□□□ 0.54
SCLT1-208ENST00000506368 TRIM65Q6PJ69 517 aa18.41■□□□□ 0.54
SCLT1-208ENST00000506368 FMR1NBQ8N0W7 255 aaPredicted RBP18.41■□□□□ 0.54
SCLT1-208ENST00000506368 NEK11Q8NG66 645 aa18.41■□□□□ 0.54
SCLT1-208ENST00000506368 TMX1Q9H3N1 280 aa18.41■□□□□ 0.54
SCLT1-208ENST00000506368 KIAA1468Q9P260 1216 aa18.41■□□□□ 0.54
SCLT1-208ENST00000506368 U3KPZ7 1027 aaPredicted RBP18.41■□□□□ 0.54
SCLT1-208ENST00000506368 BRD3Q15059 726 aa18.4■□□□□ 0.54
SCLT1-208ENST00000506368 TICAM2Q86XR7 235 aa18.4■□□□□ 0.54
SCLT1-208ENST00000506368 RGS22Q8NE09 1264 aa18.4■□□□□ 0.54
SCLT1-208ENST00000506368 FAM227BQ96M60 508 aa18.4■□□□□ 0.54
SCLT1-208ENST00000506368 BRMS1Q9HCU9 246 aa18.4■□□□□ 0.54
SCLT1-208ENST00000506368 IFNKQ9P0W0 207 aa18.4■□□□□ 0.54
SCLT1-208ENST00000506368 POTEB2H3BUK9 544 aa18.4■□□□□ 0.54
SCLT1-208ENST00000506368 POLR3GO15318 223 aaPredicted RBP18.4■□□□□ 0.54
SCLT1-208ENST00000506368 RPS6KA5O75582 802 aa18.4■□□□□ 0.54
SCLT1-208ENST00000506368 EVCP57679 992 aa18.4■□□□□ 0.54
SCLT1-208ENST00000506368 NLRP12P59046 1061 aa18.4■□□□□ 0.54
SCLT1-208ENST00000506368 SRLQ86TD4 932 aa18.4■□□□□ 0.54
SCLT1-208ENST00000506368 AACSQ86V21 672 aa18.4■□□□□ 0.54
SCLT1-208ENST00000506368 CCDC191Q8NCU4 936 aa18.4■□□□□ 0.54
SCLT1-208ENST00000506368 SDF4Q9BRK5 362 aa18.4■□□□□ 0.54
SCLT1-208ENST00000506368 PARP3Q9Y6F1 533 aa18.4■□□□□ 0.54
SCLT1-208ENST00000506368 CCDC151A5D8V7 595 aa18.39■□□□□ 0.53
SCLT1-208ENST00000506368 JAK2O60674 1132 aa18.39■□□□□ 0.53
SCLT1-208ENST00000506368 URI1O94763 535 aaPredicted RBP18.39■□□□□ 0.53
SCLT1-208ENST00000506368 ACTN2P35609 894 aa18.39■□□□□ 0.53
SCLT1-208ENST00000506368 FSD1Q9BTV5 496 aa18.39■□□□□ 0.53
SCLT1-208ENST00000506368 SPATA31A6Q5VVP1 1343 aa18.39■□□□□ 0.53
SCLT1-208ENST00000506368 ARHGAP6O43182 974 aa18.38■□□□□ 0.53
SCLT1-208ENST00000506368 ME1P48163 572 aa18.38■□□□□ 0.53
SCLT1-208ENST00000506368 STK3Q13188 491 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms