RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 TPTE2Q6XPS3 522 aa4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 KRT26Q7Z3Y9 468 aa4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 DDX42Q86XP3 938 aaKnown RBP eCLIP4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 EHBP1Q8NDI1 1231 aa4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 ZDHHC1Q8WTX9 485 aa4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 SHDQ96IW2 340 aa4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 NAP1L4Q99733 375 aaKnown RBP4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 ESYT1Q9BSJ8 1104 aa4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 OXCT2Q9BYC2 517 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 NIFKQ9BYG3 293 aaKnown RBP4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 TMX4Q9H1E5 349 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 PLAAQ9Y263 795 aa4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 TLR6Q9Y2C9 796 aa4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 MAP4K5Q9Y4K4 846 aa4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 IRS4O14654 1257 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 TSPAN6O43657 245 aa4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 MYL1P05976 194 aa4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 VIL1P09327 827 aaKnown RBP4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 SOX5P35711 763 aa4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 PDE6BP35913 854 aa4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 IDH3AP50213 366 aa4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 HIRAP54198 1017 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 EPHB1P54762 984 aa4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 CAMK2GQ13555 558 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 TTF1Q15361 905 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 C4orf46Q504U0 113 aa4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 DALRD3Q5D0E6 543 aaKnown RBP4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 PPP1R26Q5T8A7 1209 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 WDR78Q5VTH9 848 aa4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 TTC39BQ5VTQ0 682 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 PDE12Q6L8Q7 609 aaKnown RBP4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 PRPF40BQ6NWY9 871 aaKnown RBP4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 C11orf96Q7Z7L8 435 aa4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 GALNT12Q8IXK2 581 aa4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 PAF1Q8N7H5 531 aa4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 FAM169BQ8N8A8 192 aa4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 SMAD5Q99717 465 aaKnown RBP4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 WBP1LQ9NX94 342 aa4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 TMEM63CQ9P1W3 806 aa4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 SFMBT1Q9UHJ3 866 aa4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 MSRB2Q9Y3D2 182 aa4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 LAS1LQ9Y4W2 734 aaKnown RBP4.72□□□□□ -1.65
HMGB1P22-201ENST00000505315 EREGO14944 169 aa4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 NPHP1O15259 732 aa4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 DIAPH1O60610 1272 aaKnown RBP4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 LILRA1O75019 489 aa4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 CES1P23141 567 aa4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 LIG3P49916 1009 aa4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 ARSDP51689 593 aa4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 GUCY2FP51841 1108 aa4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 CENPCQ03188 943 aa4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 LRRC41Q15345 812 aa4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 C1orf53Q5VUE5 145 aa4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 BICDL1Q6ZP65 573 aa4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 GK5Q6ZS86 529 aa4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 C14orf80Q86SX3 495 aa4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 NIM1KQ8IY84 436 aa4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 CCDC116Q8IYX3 515 aa4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 SYNPOQ8N3V7 929 aa4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 PHC3Q8NDX5 983 aa4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 JARID2Q92833 1246 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 RELTQ969Z4 430 aa4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 MFSD3Q96ES6 412 aa4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 FAM126AQ9BYI3 521 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 CAAP1Q9H8G2 361 aa4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 BSDC1Q9NW68 430 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 PGPEP1Q9NXJ5 209 aa4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 RTCBQ9Y3I0 505 aaKnown RBP4.71□□□□□ -1.66
HMGB1P22-201ENST00000505315 TGFBR3LH3BV60 316 aa4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 TK2O00142 265 aa4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 RASGRP1O95267 797 aa4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 GJB6O95452 261 aa4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 S1PR4O95977 384 aa4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 FOSP01100 380 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 POTEIP0CG38 1075 aa4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 ADD1P35611 737 aaKnown RBP4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 TXLNAP40222 546 aa4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 PLA2G4AP47712 749 aa4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 ZNF165P49910 485 aa4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 SETQ01105 290 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 LMOD3Q0VAK6 560 aa4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 NBPF10Q6P3W6 841 aaKnown RBP4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 POTEHQ6S545 545 aa4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 SPATC1Q76KD6 591 aa4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 SV2BQ7L1I2 683 aa4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 CHPFQ8IZ52 775 aa4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 MYO1HQ8N1T3 1032 aa4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 C1orf127Q8N9H9 656 aa4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 ZSWIM2Q8NEG5 633 aa4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 PNISRQ8TF01 805 aaKnown RBP4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 ZSCAN10Q96SZ4 725 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 APBA2Q99767 749 aa4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 BCS1LQ9Y276 419 aa4.7□□□□□ -1.66
HMGB1P22-201ENST00000505315 GREM1O60565 184 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 BPNT1O95861 308 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 SCGB1D2O95969 90 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 CELA3AP09093 270 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 CPEP16870 476 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 CRKP46108 304 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 GIPRP48546 466 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms