RNA–Protein interactions for RNA: ENST00000505108.1

TRAPPC13-207, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-207ENST00000505108 GRM2Q14416 872 aa9.92□□□□□ -0.82
TRAPPC13-207ENST00000505108 GRIK5Q16478 980 aa9.92□□□□□ -0.82
TRAPPC13-207ENST00000505108 CEP135Q66GS9 1140 aa9.92□□□□□ -0.82
TRAPPC13-207ENST00000505108 ZNF417Q8TAU3 575 aa9.92□□□□□ -0.82
TRAPPC13-207ENST00000505108 ZNF587Q96SQ5 575 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC13-207ENST00000505108 TCF12Q99081 682 aa9.92□□□□□ -0.82
TRAPPC13-207ENST00000505108 OSBPL7Q9BZF2 842 aa9.92□□□□□ -0.82
TRAPPC13-207ENST00000505108 RBSNQ9H1K0 784 aa9.92□□□□□ -0.82
TRAPPC13-207ENST00000505108 JPH1Q9HDC5 661 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC13-207ENST00000505108 TRIM33Q9UPN9 1127 aa9.92□□□□□ -0.82
TRAPPC13-207ENST00000505108 METTL12A8MUP2 240 aa9.91□□□□□ -0.82
TRAPPC13-207ENST00000505108 PDE2AO00408 941 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC13-207ENST00000505108 ZSCAN1Q8NBB4 408 aa9.91□□□□□ -0.82
TRAPPC13-207ENST00000505108 GLIS3Q8NEA6 775 aa9.91□□□□□ -0.82
TRAPPC13-207ENST00000505108 NXPE3Q969Y0 559 aa9.91□□□□□ -0.82
TRAPPC13-207ENST00000505108 EHD4Q9H223 541 aa9.91□□□□□ -0.82
TRAPPC13-207ENST00000505108 SUV39H2Q9H5I1 410 aa9.91□□□□□ -0.82
TRAPPC13-207ENST00000505108 GNA15P30679 374 aa9.9□□□□□ -0.82
TRAPPC13-207ENST00000505108 AFF1P51825 1210 aaKnown RBP9.9□□□□□ -0.82
TRAPPC13-207ENST00000505108 ZNF326Q5BKZ1 582 aaKnown RBP9.9□□□□□ -0.82
TRAPPC13-207ENST00000505108 KANK3Q6NY19 840 aa9.9□□□□□ -0.82
TRAPPC13-207ENST00000505108 NXPE4Q6UWF7 544 aa9.9□□□□□ -0.82
TRAPPC13-207ENST00000505108 CCNJLQ8IV13 435 aa9.9□□□□□ -0.82
TRAPPC13-207ENST00000505108 TMEM102Q8N9M5 508 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC13-207ENST00000505108 NEDD1Q8NHV4 660 aa9.9□□□□□ -0.82
TRAPPC13-207ENST00000505108 TTC9Q92623 222 aa9.9□□□□□ -0.82
TRAPPC13-207ENST00000505108 BCO2Q9BYV7 579 aa9.9□□□□□ -0.82
TRAPPC13-207ENST00000505108 LIN7BQ9HAP6 207 aa9.9□□□□□ -0.82
TRAPPC13-207ENST00000505108 UNCXA6NJT0 531 aa9.89□□□□□ -0.83
TRAPPC13-207ENST00000505108 SMNDC1O75940 238 aaKnown RBP eCLIP9.89□□□□□ -0.83
TRAPPC13-207ENST00000505108 DGKGP49619 791 aa9.89□□□□□ -0.83
TRAPPC13-207ENST00000505108 COL9A3Q14050 684 aaPredicted RBP9.89□□□□□ -0.83
TRAPPC13-207ENST00000505108 BHLHE41Q9C0J9 482 aaPredicted RBP9.89□□□□□ -0.83
TRAPPC13-207ENST00000505108 LACRTQ9GZZ8 138 aa9.89□□□□□ -0.83
TRAPPC13-207ENST00000505108 GRIA4P48058 902 aa9.88□□□□□ -0.83
TRAPPC13-207ENST00000505108 SNRPNP63162 240 aaKnown RBP9.88□□□□□ -0.83
TRAPPC13-207ENST00000505108 DAB2P98082 770 aa9.88□□□□□ -0.83
TRAPPC13-207ENST00000505108 FGD1P98174 961 aa9.88□□□□□ -0.83
TRAPPC13-207ENST00000505108 SPRED3Q2MJR0 410 aa9.88□□□□□ -0.83
TRAPPC13-207ENST00000505108 GDF6Q6KF10 455 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC13-207ENST00000505108 ABCB6Q9NP58 842 aa9.88□□□□□ -0.83
TRAPPC13-207ENST00000505108 LILRB5O75023 590 aa9.87□□□□□ -0.83
TRAPPC13-207ENST00000505108 XPCQ01831 940 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC13-207ENST00000505108 TMC4Q7Z404 712 aa9.87□□□□□ -0.83
TRAPPC13-207ENST00000505108 RRAGCQ9HB90 399 aa9.87□□□□□ -0.83
TRAPPC13-207ENST00000505108 ENAMQ9NRM1 1142 aa9.87□□□□□ -0.83
TRAPPC13-207ENST00000505108 SPG7Q9UQ90 795 aa9.87□□□□□ -0.83
TRAPPC13-207ENST00000505108 BAG6P46379 1132 aa9.86□□□□□ -0.83
TRAPPC13-207ENST00000505108 PSMD2Q13200 908 aa9.86□□□□□ -0.83
TRAPPC13-207ENST00000505108 PRPF40BQ6NWY9 871 aaKnown RBP9.86□□□□□ -0.83
TRAPPC13-207ENST00000505108 PRDM6Q9NQX0 595 aa9.86□□□□□ -0.83
TRAPPC13-207ENST00000505108 SH2B1Q9NRF2 756 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC13-207ENST00000505108 NID1P14543 1247 aa9.85□□□□□ -0.83
TRAPPC13-207ENST00000505108 ASAP3Q8TDY4 903 aa9.85□□□□□ -0.83
TRAPPC13-207ENST00000505108 C12orf49Q9H741 205 aa9.85□□□□□ -0.83
TRAPPC13-207ENST00000505108 AK5Q9Y6K8 562 aa9.85□□□□□ -0.83
TRAPPC13-207ENST00000505108 TMEM238LA0A1B0GVL6 79 aa9.84□□□□□ -0.83
TRAPPC13-207ENST00000505108 INSM1Q01101 510 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC13-207ENST00000505108 LINC00114Q6XXX2 140 aa9.84□□□□□ -0.83
TRAPPC13-207ENST00000505108 IL22RA1Q8N6P7 574 aa9.84□□□□□ -0.83
TRAPPC13-207ENST00000505108 FRMD6Q96NE9 622 aa9.84□□□□□ -0.83
TRAPPC13-207ENST00000505108 ADAM19Q9H013 955 aa9.84□□□□□ -0.83
TRAPPC13-207ENST00000505108 MUC3BQ9H195 1237 aa9.84□□□□□ -0.83
TRAPPC13-207ENST00000505108 KIAA1522Q9P206 1035 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC13-207ENST00000505108 ADAMTS8Q9UP79 889 aa9.84□□□□□ -0.83
TRAPPC13-207ENST00000505108 TRAK1Q9UPV9 953 aa9.84□□□□□ -0.83
TRAPPC13-207ENST00000505108 A0A096LPE4 126 aa9.83□□□□□ -0.84
TRAPPC13-207ENST00000505108 A0A1W2PPZ6 126 aa9.83□□□□□ -0.84
TRAPPC13-207ENST00000505108 GIPC1O14908 333 aa9.83□□□□□ -0.84
TRAPPC13-207ENST00000505108 PTPRAP18433 802 aa9.83□□□□□ -0.84
TRAPPC13-207ENST00000505108 RBM25P49756 843 aaKnown RBP9.83□□□□□ -0.84
TRAPPC13-207ENST00000505108 FCGRTP55899 365 aa9.83□□□□□ -0.84
TRAPPC13-207ENST00000505108 MRPL58Q14197 206 aaKnown RBP9.83□□□□□ -0.84
TRAPPC13-207ENST00000505108 ILDR2Q71H61 639 aa9.83□□□□□ -0.84
TRAPPC13-207ENST00000505108 SOX13Q9UN79 622 aa9.83□□□□□ -0.84
TRAPPC13-207ENST00000505108 EPHA1P21709 976 aa9.82□□□□□ -0.84
TRAPPC13-207ENST00000505108 EIF4BP23588 611 aaKnown RBP9.82□□□□□ -0.84
TRAPPC13-207ENST00000505108 VN1R5Q7Z5H4 357 aa9.82□□□□□ -0.84
TRAPPC13-207ENST00000505108 C3orf58Q8NDZ4 430 aa9.82□□□□□ -0.84
TRAPPC13-207ENST00000505108 BSNDQ8WZ55 320 aa9.82□□□□□ -0.84
TRAPPC13-207ENST00000505108 TRIM11Q96F44 468 aa9.82□□□□□ -0.84
TRAPPC13-207ENST00000505108 SORBS3O60504 671 aa9.81□□□□□ -0.84
TRAPPC13-207ENST00000505108 CTSHP09668 335 aa9.81□□□□□ -0.84
TRAPPC13-207ENST00000505108 USP17L7P0C7H9 530 aa9.81□□□□□ -0.84
TRAPPC13-207ENST00000505108 ITPKAP23677 461 aa9.81□□□□□ -0.84
TRAPPC13-207ENST00000505108 CDC27P30260 824 aa9.81□□□□□ -0.84
TRAPPC13-207ENST00000505108 CDC25BP30305 580 aa9.81□□□□□ -0.84
TRAPPC13-207ENST00000505108 MSL1Q68DK7 614 aa9.81□□□□□ -0.84
TRAPPC13-207ENST00000505108 DMRTC2Q8IXT2 367 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC13-207ENST00000505108 SRCIN1Q9C0H9 1055 aa9.81□□□□□ -0.84
TRAPPC13-207ENST00000505108 TXNDC11Q6PKC3 985 aa9.8□□□□□ -0.84
TRAPPC13-207ENST00000505108 WFDC8Q8IUA0 241 aa9.8□□□□□ -0.84
TRAPPC13-207ENST00000505108 MRRFQ96E11 262 aaKnown RBP9.8□□□□□ -0.84
TRAPPC13-207ENST00000505108 MRS2Q9HD23 443 aa9.8□□□□□ -0.84
TRAPPC13-207ENST00000505108 FAM8A1Q9UBU6 413 aa9.8□□□□□ -0.84
TRAPPC13-207ENST00000505108 VTI1BQ9UEU0 232 aa9.8□□□□□ -0.84
TRAPPC13-207ENST00000505108 CNTNAP5Q8WYK1 1306 aa9.8□□□□□ -0.84
TRAPPC13-207ENST00000505108 LDLRAD1Q5T700 205 aa9.79□□□□□ -0.84
TRAPPC13-207ENST00000505108 DTHD1Q6ZMT9 781 aa9.79□□□□□ -0.84
TRAPPC13-207ENST00000505108 ZNF576Q9H609 170 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms