RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 DDX46Q7L014 1031 aaKnown RBP12.7□□□□□ -0.38
TPM3-217ENST00000504663 SLC16A10Q8TF71 515 aa12.7□□□□□ -0.38
TPM3-217ENST00000504663 LPIN2Q92539 896 aa12.7□□□□□ -0.38
TPM3-217ENST00000504663 ZNF512BQ96KM6 892 aaPredicted RBP12.7□□□□□ -0.38
TPM3-217ENST00000504663 CRAMP1Q96RY5 1269 aa12.7□□□□□ -0.38
TPM3-217ENST00000504663 MPHOSPH8Q99549 860 aa12.7□□□□□ -0.38
TPM3-217ENST00000504663 HAUS7Q99871 368 aa12.7□□□□□ -0.38
TPM3-217ENST00000504663 SGIP1Q9BQI5 828 aa12.7□□□□□ -0.38
TPM3-217ENST00000504663 BOLA2Q9H3K6 86 aa12.7□□□□□ -0.38
TPM3-217ENST00000504663 PARP3Q9Y6F1 533 aa12.7□□□□□ -0.38
TPM3-217ENST00000504663 ERC2O15083 957 aa12.69□□□□□ -0.38
TPM3-217ENST00000504663 KLRK1P26718 216 aa12.69□□□□□ -0.38
TPM3-217ENST00000504663 ARID4AP29374 1257 aaPredicted RBP12.69□□□□□ -0.38
TPM3-217ENST00000504663 GPATCH3Q96I76 525 aa12.69□□□□□ -0.38
TPM3-217ENST00000504663 NEUROD6Q96NK8 337 aa12.69□□□□□ -0.38
TPM3-217ENST00000504663 CHGBP05060 677 aa12.68□□□□□ -0.38
TPM3-217ENST00000504663 MCAMP43121 646 aa12.68□□□□□ -0.38
TPM3-217ENST00000504663 PHKA1P46020 1223 aa12.68□□□□□ -0.38
TPM3-217ENST00000504663 ILDR2Q71H61 639 aa12.68□□□□□ -0.38
TPM3-217ENST00000504663 SPRYD3Q8NCJ5 442 aa12.68□□□□□ -0.38
TPM3-217ENST00000504663 MAST2Q6P0Q8 1798 aa12.68□□□□□ -0.38
TPM3-217ENST00000504663 ECM2O94769 699 aaPredicted RBP12.67□□□□□ -0.38
TPM3-217ENST00000504663 UBE4AQ14139 1066 aa12.67□□□□□ -0.38
TPM3-217ENST00000504663 CCDC102BQ68D86 513 aa12.67□□□□□ -0.38
TPM3-217ENST00000504663 PI16Q6UXB8 463 aa12.67□□□□□ -0.38
TPM3-217ENST00000504663 EVI5LQ96CN4 794 aa12.67□□□□□ -0.38
TPM3-217ENST00000504663 ANTXR1Q9H6X2 564 aa12.67□□□□□ -0.38
TPM3-217ENST00000504663 MED23Q9ULK4 1368 aa12.67□□□□□ -0.38
TPM3-217ENST00000504663 TRIM6-TRIM34B2RNG4 842 aa12.66□□□□□ -0.38
TPM3-217ENST00000504663 NPHP1O15259 732 aa12.66□□□□□ -0.38
TPM3-217ENST00000504663 SLC5A1P13866 664 aa12.66□□□□□ -0.38
TPM3-217ENST00000504663 NBR1Q14596 966 aa12.66□□□□□ -0.38
TPM3-217ENST00000504663 CNTROBQ8N137 903 aa12.66□□□□□ -0.38
TPM3-217ENST00000504663 RPGRQ92834 1020 aaKnown RBP12.66□□□□□ -0.38
TPM3-217ENST00000504663 RILPL2Q969X0 211 aa12.66□□□□□ -0.38
TPM3-217ENST00000504663 RBM17Q96I25 401 aaKnown RBP12.66□□□□□ -0.38
TPM3-217ENST00000504663 TBC1D32Q96NH3 1257 aa12.66□□□□□ -0.38
TPM3-217ENST00000504663 ESYT1Q9BSJ8 1104 aa12.66□□□□□ -0.38
TPM3-217ENST00000504663 SNRKQ9NRH2 765 aa12.66□□□□□ -0.38
TPM3-217ENST00000504663 CHD4Q14839 1912 aa12.66□□□□□ -0.38
TPM3-217ENST00000504663 IFIT1P09914 478 aaKnown RBP12.65□□□□□ -0.38
TPM3-217ENST00000504663 NPR1P16066 1061 aa12.65□□□□□ -0.38
TPM3-217ENST00000504663 PDE6BP35913 854 aa12.65□□□□□ -0.38
TPM3-217ENST00000504663 GPSM2P81274 684 aa12.65□□□□□ -0.38
TPM3-217ENST00000504663 R3HDM1Q15032 1099 aaKnown RBP12.65□□□□□ -0.38
TPM3-217ENST00000504663 C15orf52Q6ZUT6 534 aaKnown RBP12.65□□□□□ -0.38
TPM3-217ENST00000504663 TXNRD3Q86VQ6 643 aa12.65□□□□□ -0.38
TPM3-217ENST00000504663 MASTLQ96GX5 879 aa12.65□□□□□ -0.38
TPM3-217ENST00000504663 ANKRD2Q9GZV1 360 aa12.65□□□□□ -0.38
TPM3-217ENST00000504663 PODXL2Q9NZ53 605 aa12.65□□□□□ -0.38
TPM3-217ENST00000504663 XDHP47989 1333 aa12.64□□□□□ -0.39
TPM3-217ENST00000504663 A0A0D9SFI3 127 aa12.64□□□□□ -0.39
TPM3-217ENST00000504663 PPEF1O14829 653 aaPredicted RBP12.64□□□□□ -0.39
TPM3-217ENST00000504663 SGSM2O43147 1006 aa12.64□□□□□ -0.39
TPM3-217ENST00000504663 BBOX1O75936 387 aa12.64□□□□□ -0.39
TPM3-217ENST00000504663 ZBTB7AO95365 584 aa12.64□□□□□ -0.39
TPM3-217ENST00000504663 CYP2E1P05181 493 aaPredicted RBP12.64□□□□□ -0.39
TPM3-217ENST00000504663 KCNA3P22001 575 aa12.64□□□□□ -0.39
TPM3-217ENST00000504663 CHRNA5P30532 468 aa12.64□□□□□ -0.39
TPM3-217ENST00000504663 ZAP70P43403 619 aa12.64□□□□□ -0.39
TPM3-217ENST00000504663 MFAP1P55081 439 aaKnown RBP12.64□□□□□ -0.39
TPM3-217ENST00000504663 RASGRF1Q13972 1273 aa12.64□□□□□ -0.39
TPM3-217ENST00000504663 TTC39AQ5SRH9 613 aa12.64□□□□□ -0.39
TPM3-217ENST00000504663 STYK1Q6J9G0 422 aa12.64□□□□□ -0.39
TPM3-217ENST00000504663 OLFM4Q6UX06 510 aa12.64□□□□□ -0.39
TPM3-217ENST00000504663 FBXO33Q7Z6M2 555 aa12.64□□□□□ -0.39
TPM3-217ENST00000504663 KBTBD3Q8NAB2 608 aa12.64□□□□□ -0.39
TPM3-217ENST00000504663 FAM84BQ96KN1 310 aaPredicted RBP12.64□□□□□ -0.39
TPM3-217ENST00000504663 DNAJC2Q99543 621 aaKnown RBP12.64□□□□□ -0.39
TPM3-217ENST00000504663 MTFR1LQ9H019 292 aa12.64□□□□□ -0.39
TPM3-217ENST00000504663 PAG1Q9NWQ8 432 aa12.64□□□□□ -0.39
TPM3-217ENST00000504663 HMG20BQ9P0W2 317 aa12.64□□□□□ -0.39
TPM3-217ENST00000504663 GOLIM4O00461 696 aa12.63□□□□□ -0.39
TPM3-217ENST00000504663 PTGER2P43116 358 aa12.63□□□□□ -0.39
TPM3-217ENST00000504663 GYG1P46976 350 aa12.63□□□□□ -0.39
TPM3-217ENST00000504663 BCAMP50895 628 aa12.63□□□□□ -0.39
TPM3-217ENST00000504663 NMIQ13287 307 aaPredicted RBP12.63□□□□□ -0.39
TPM3-217ENST00000504663 SLFNL1Q499Z3 407 aa12.63□□□□□ -0.39
TPM3-217ENST00000504663 CCDC158Q5M9N0 1113 aa12.63□□□□□ -0.39
TPM3-217ENST00000504663 C2CD5Q86YS7 1000 aa12.63□□□□□ -0.39
TPM3-217ENST00000504663 SP8Q8IXZ3 490 aa12.63□□□□□ -0.39
TPM3-217ENST00000504663 C7orf43Q8WVR3 580 aa12.63□□□□□ -0.39
TPM3-217ENST00000504663 FAM227BQ96M60 508 aa12.63□□□□□ -0.39
TPM3-217ENST00000504663 PIH1D3Q9NQM4 214 aaKnown RBP12.63□□□□□ -0.39
TPM3-217ENST00000504663 ATP6V0A2Q9Y487 856 aa12.63□□□□□ -0.39
TPM3-217ENST00000504663 UQCRFS1P1P0C7P4 283 aa12.62□□□□□ -0.39
TPM3-217ENST00000504663 RBM25P49756 843 aaKnown RBP12.62□□□□□ -0.39
TPM3-217ENST00000504663 C1QBPQ07021 282 aaKnown RBP12.62□□□□□ -0.39
TPM3-217ENST00000504663 MKRN4PQ13434 485 aaPredicted RBP12.62□□□□□ -0.39
TPM3-217ENST00000504663 TMC4Q7Z404 712 aa12.62□□□□□ -0.39
TPM3-217ENST00000504663 GPR101Q96P66 508 aaPredicted RBP12.62□□□□□ -0.39
TPM3-217ENST00000504663 KIF2CQ99661 725 aa12.62□□□□□ -0.39
TPM3-217ENST00000504663 USP26Q9BXU7 913 aa12.62□□□□□ -0.39
TPM3-217ENST00000504663 LSG1Q9H089 658 aaKnown RBP12.62□□□□□ -0.39
TPM3-217ENST00000504663 POLLQ9UGP5 575 aa12.62□□□□□ -0.39
TPM3-217ENST00000504663 LEMD3Q9Y2U8 911 aa12.62□□□□□ -0.39
TPM3-217ENST00000504663 PSME4Q14997 1843 aa12.62□□□□□ -0.39
TPM3-217ENST00000504663 PDS5AQ29RF7 1337 aaKnown RBP12.62□□□□□ -0.39
TPM3-217ENST00000504663 RAD50Q92878 1312 aa12.62□□□□□ -0.39
TPM3-217ENST00000504663 PSDA5PKW4 1024 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 995 ms