RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 CALR3Q96L12 384 aaKnown RBP8.53□□□□□ -1.04
UBE3D-205ENST00000503942 FAM83CQ9BQN1 747 aa8.53□□□□□ -1.04
UBE3D-205ENST00000503942 ADGRE2Q9UHX3 823 aa8.53□□□□□ -1.04
UBE3D-205ENST00000503942 UBAP1LF5GYI3 381 aa8.52□□□□□ -1.05
UBE3D-205ENST00000503942 ADAM11O75078 769 aa8.52□□□□□ -1.05
UBE3D-205ENST00000503942 SHKBP1Q8TBC3 707 aa8.52□□□□□ -1.05
UBE3D-205ENST00000503942 UBASH3BQ8TF42 649 aa8.52□□□□□ -1.05
UBE3D-205ENST00000503942 EPHA1P21709 976 aa8.51□□□□□ -1.05
UBE3D-205ENST00000503942 CDC25BP30305 580 aa8.51□□□□□ -1.05
UBE3D-205ENST00000503942 FAM117BQ6P1L5 589 aa8.51□□□□□ -1.05
UBE3D-205ENST00000503942 FAM200AQ8TCP9 573 aa8.51□□□□□ -1.05
UBE3D-205ENST00000503942 RASSF4Q9H2L5 321 aa8.51□□□□□ -1.05
UBE3D-205ENST00000503942 DDX3YO15523 660 aaKnown RBP8.5□□□□□ -1.05
UBE3D-205ENST00000503942 KIF4AO95239 1232 aa8.5□□□□□ -1.05
UBE3D-205ENST00000503942 BRD2P25440 801 aaKnown RBP8.5□□□□□ -1.05
UBE3D-205ENST00000503942 FAM26DQ5JW98 314 aa8.5□□□□□ -1.05
UBE3D-205ENST00000503942 ANKRD34AQ69YU3 496 aa8.5□□□□□ -1.05
UBE3D-205ENST00000503942 BEND4Q6ZU67 534 aa8.5□□□□□ -1.05
UBE3D-205ENST00000503942 PIK3R5Q8WYR1 880 aa8.5□□□□□ -1.05
UBE3D-205ENST00000503942 SAP130Q9H0E3 1048 aa8.5□□□□□ -1.05
UBE3D-205ENST00000503942 BMP3P12645 472 aa8.49□□□□□ -1.05
UBE3D-205ENST00000503942 PREPP48147 710 aa8.49□□□□□ -1.05
UBE3D-205ENST00000503942 C16orf46Q6P387 395 aa8.49□□□□□ -1.05
UBE3D-205ENST00000503942 PBX4Q9BYU1 374 aa8.49□□□□□ -1.05
UBE3D-205ENST00000503942 SEC31BQ9NQW1 1179 aa8.49□□□□□ -1.05
UBE3D-205ENST00000503942 FAM13BQ9NYF5 915 aa8.49□□□□□ -1.05
UBE3D-205ENST00000503942 PTPRAP18433 802 aa8.48□□□□□ -1.05
UBE3D-205ENST00000503942 SCNN1AP37088 669 aa8.48□□□□□ -1.05
UBE3D-205ENST00000503942 TTC39BQ5VTQ0 682 aaPredicted RBP8.48□□□□□ -1.05
UBE3D-205ENST00000503942 KLHDC7BQ96G42 594 aa8.48□□□□□ -1.05
UBE3D-205ENST00000503942 KCNF1Q9H3M0 494 aa8.48□□□□□ -1.05
UBE3D-205ENST00000503942 SH2B1Q9NRF2 756 aaPredicted RBP8.48□□□□□ -1.05
UBE3D-205ENST00000503942 HIF3AQ9Y2N7 669 aa8.48□□□□□ -1.05
UBE3D-205ENST00000503942 TNFRSF10BO14763 440 aa8.47□□□□□ -1.05
UBE3D-205ENST00000503942 SART1O43290 800 aaKnown RBP8.47□□□□□ -1.05
UBE3D-205ENST00000503942 OCLNQ16625 522 aa8.47□□□□□ -1.05
UBE3D-205ENST00000503942 PRIMPOLQ96LW4 560 aa8.47□□□□□ -1.05
UBE3D-205ENST00000503942 ADAM19Q9H013 955 aa8.47□□□□□ -1.05
UBE3D-205ENST00000503942 HOXA10P31260 410 aaPredicted RBP8.46□□□□□ -1.06
UBE3D-205ENST00000503942 SWI5Q1ZZU3 235 aa8.46□□□□□ -1.06
UBE3D-205ENST00000503942 ABI1Q8IZP0 508 aa8.46□□□□□ -1.06
UBE3D-205ENST00000503942 CEP120Q8N960 986 aa8.46□□□□□ -1.06
UBE3D-205ENST00000503942 WNT8BQ93098 351 aa8.46□□□□□ -1.06
UBE3D-205ENST00000503942 COL26A1Q96A83 441 aa8.46□□□□□ -1.06
UBE3D-205ENST00000503942 RNF208Q9H0X6 261 aa8.46□□□□□ -1.06
UBE3D-205ENST00000503942 SERPINA10Q9UK55 444 aa8.46□□□□□ -1.06
UBE3D-205ENST00000503942 FNDC3AQ9Y2H6 1198 aaKnown RBP8.46□□□□□ -1.06
UBE3D-205ENST00000503942 WDR64B1ANS9 1081 aa8.45□□□□□ -1.06
UBE3D-205ENST00000503942 H3BRJ5 948 aa8.45□□□□□ -1.06
UBE3D-205ENST00000503942 PIP4K2BP78356 416 aa8.45□□□□□ -1.06
UBE3D-205ENST00000503942 CFAP70Q5T0N1 1121 aa8.45□□□□□ -1.06
UBE3D-205ENST00000503942 CCDC97Q96F63 343 aaPredicted RBP8.45□□□□□ -1.06
UBE3D-205ENST00000503942 ABI2Q9NYB9 513 aaPredicted RBP8.45□□□□□ -1.06
UBE3D-205ENST00000503942 PIM2Q9P1W9 311 aa8.45□□□□□ -1.06
UBE3D-205ENST00000503942 FAM177BA6PVY3 158 aa8.44□□□□□ -1.06
UBE3D-205ENST00000503942 PRMT3O60678 531 aa8.44□□□□□ -1.06
UBE3D-205ENST00000503942 CYP2E1P05181 493 aaPredicted RBP8.44□□□□□ -1.06
UBE3D-205ENST00000503942 POP1Q99575 1024 aaKnown RBP8.44□□□□□ -1.06
UBE3D-205ENST00000503942 NOVA2Q9UNW9 492 aaKnown RBP8.44□□□□□ -1.06
UBE3D-205ENST00000503942 ACIN1Q9UKV3 1341 aaKnown RBP8.44□□□□□ -1.06
UBE3D-205ENST00000503942 ZAP70P43403 619 aa8.43□□□□□ -1.06
UBE3D-205ENST00000503942 JAG1P78504 1218 aa8.43□□□□□ -1.06
UBE3D-205ENST00000503942 FDX2Q6P4F2 183 aa8.43□□□□□ -1.06
UBE3D-205ENST00000503942 NCAPG2Q86XI2 1143 aa8.43□□□□□ -1.06
UBE3D-205ENST00000503942 HOMEZQ8IX15 550 aa8.43□□□□□ -1.06
UBE3D-205ENST00000503942 MFSD14AQ96MC6 490 aa8.43□□□□□ -1.06
UBE3D-205ENST00000503942 OSGEPQ9NPF4 335 aa8.43□□□□□ -1.06
UBE3D-205ENST00000503942 NLRP12P59046 1061 aa8.42□□□□□ -1.06
UBE3D-205ENST00000503942 MSMPQ1L6U9 139 aa8.42□□□□□ -1.06
UBE3D-205ENST00000503942 RUSC1Q9BVN2 902 aa8.42□□□□□ -1.06
UBE3D-205ENST00000503942 ANGEL1Q9UNK9 670 aaKnown RBP8.42□□□□□ -1.06
UBE3D-205ENST00000503942 MAP4P27816 1152 aaKnown RBP8.41□□□□□ -1.06
UBE3D-205ENST00000503942 CABP4P57796 275 aa8.41□□□□□ -1.06
UBE3D-205ENST00000503942 OGFOD2Q6N063 350 aa8.41□□□□□ -1.06
UBE3D-205ENST00000503942 GPR152Q8TDT2 470 aa8.41□□□□□ -1.06
UBE3D-205ENST00000503942 GAS2O43903 313 aaKnown RBP8.4□□□□□ -1.06
UBE3D-205ENST00000503942 PRNPP04156 253 aa8.4□□□□□ -1.06
UBE3D-205ENST00000503942 FOSL1P15407 271 aa8.4□□□□□ -1.06
UBE3D-205ENST00000503942 RFX1P22670 979 aa8.4□□□□□ -1.06
UBE3D-205ENST00000503942 CPSF6Q16630 551 aaKnown RBP eCLIP8.4□□□□□ -1.06
UBE3D-205ENST00000503942 CBLL1Q75N03 491 aa8.4□□□□□ -1.06
UBE3D-205ENST00000503942 GIMAP7Q8NHV1 300 aa8.4□□□□□ -1.06
UBE3D-205ENST00000503942 LEMD3Q9Y2U8 911 aa8.4□□□□□ -1.06
UBE3D-205ENST00000503942 MEGF11A6BM72 1044 aa8.39□□□□□ -1.07
UBE3D-205ENST00000503942 FAM69CQ0P6D2 419 aa8.39□□□□□ -1.07
UBE3D-205ENST00000503942 PDE12Q6L8Q7 609 aaKnown RBP8.39□□□□□ -1.07
UBE3D-205ENST00000503942 CAPN12Q6ZSI9 719 aa8.39□□□□□ -1.07
UBE3D-205ENST00000503942 ATG3Q9NT62 314 aa8.39□□□□□ -1.07
UBE3D-205ENST00000503942 CCDC39Q9UFE4 941 aa8.39□□□□□ -1.07
UBE3D-205ENST00000503942 F13BP05160 661 aa8.38□□□□□ -1.07
UBE3D-205ENST00000503942 CDCA8Q53HL2 280 aa8.38□□□□□ -1.07
UBE3D-205ENST00000503942 SGO2Q562F6 1265 aa8.38□□□□□ -1.07
UBE3D-205ENST00000503942 NFXL1Q6ZNB6 911 aa8.38□□□□□ -1.07
UBE3D-205ENST00000503942 MKNK1Q9BUB5 465 aa8.38□□□□□ -1.07
UBE3D-205ENST00000503942 ELP3Q9H9T3 547 aa8.38□□□□□ -1.07
UBE3D-205ENST00000503942 KANSL3Q9P2N6 904 aa8.38□□□□□ -1.07
UBE3D-205ENST00000503942 ZMIZ1Q9ULJ6 1067 aa8.38□□□□□ -1.07
UBE3D-205ENST00000503942 ZBTB39O15060 712 aa8.37□□□□□ -1.07
UBE3D-205ENST00000503942 VSIG10LQ86VR7 867 aa8.37□□□□□ -1.07
UBE3D-205ENST00000503942 FBXL6Q8N531 539 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms