RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 ARMC5Q96C12 935 aa10.65□□□□□ -0.7
FN1-227ENST00000498719 L3MBTL3Q96JM7 780 aaPredicted RBP10.65□□□□□ -0.7
FN1-227ENST00000498719 GMLQ99445 158 aa10.65□□□□□ -0.7
FN1-227ENST00000498719 RNF19AQ9NV58 838 aa10.65□□□□□ -0.7
FN1-227ENST00000498719 STAP2Q9UGK3 403 aa10.65□□□□□ -0.7
FN1-227ENST00000498719 NSFL1CQ9UNZ2 370 aaKnown RBP10.65□□□□□ -0.7
FN1-227ENST00000498719 TCHHQ07283 1943 aa10.65□□□□□ -0.7
FN1-227ENST00000498719 SRGAP3O43295 1099 aa10.65□□□□□ -0.71
FN1-227ENST00000498719 NASPP49321 788 aaPredicted RBP10.65□□□□□ -0.71
FN1-227ENST00000498719 EIF4A1P60842 406 aaKnown RBP10.65□□□□□ -0.71
FN1-227ENST00000498719 XPCQ01831 940 aaPredicted RBP10.65□□□□□ -0.71
FN1-227ENST00000498719 ZSCAN23Q3MJ62 389 aa10.65□□□□□ -0.71
FN1-227ENST00000498719 MPRIPQ6WCQ1 1025 aa10.65□□□□□ -0.71
FN1-227ENST00000498719 TMEM87AQ8NBN3 555 aa10.65□□□□□ -0.71
FN1-227ENST00000498719 SLC39A13Q96H72 371 aa10.65□□□□□ -0.71
FN1-227ENST00000498719 CCDC85AQ96PX6 553 aaPredicted RBP10.65□□□□□ -0.71
FN1-227ENST00000498719 IER2Q9BTL4 223 aa10.65□□□□□ -0.71
FN1-227ENST00000498719 SRCIN1Q9C0H9 1055 aa10.65□□□□□ -0.71
FN1-227ENST00000498719 CEMIPQ8WUJ3 1361 aa10.64□□□□□ -0.71
FN1-227ENST00000498719 ESPNB1AK53 854 aa10.64□□□□□ -0.71
FN1-227ENST00000498719 MAPK1P28482 360 aa10.64□□□□□ -0.71
FN1-227ENST00000498719 FANCCQ00597 558 aa10.64□□□□□ -0.71
FN1-227ENST00000498719 RIC3Q7Z5B4 369 aa10.64□□□□□ -0.71
FN1-227ENST00000498719 IP6K1Q92551 441 aa10.64□□□□□ -0.71
FN1-227ENST00000498719 NLRP2Q9NX02 1062 aa10.64□□□□□ -0.71
FN1-227ENST00000498719 TCEAL9Q9UHQ7 104 aa10.64□□□□□ -0.71
FN1-227ENST00000498719 ERBB3P21860 1342 aa10.64□□□□□ -0.71
FN1-227ENST00000498719 PDGFRBP09619 1106 aa10.64□□□□□ -0.71
FN1-227ENST00000498719 NDUFV2P19404 249 aa10.64□□□□□ -0.71
FN1-227ENST00000498719 ZNF211Q13398 564 aaPredicted RBP10.64□□□□□ -0.71
FN1-227ENST00000498719 ESCO1Q5FWF5 840 aa10.64□□□□□ -0.71
FN1-227ENST00000498719 DDX12PQ92771 950 aa10.64□□□□□ -0.71
FN1-227ENST00000498719 TRIM44Q96DX7 344 aaPredicted RBP10.64□□□□□ -0.71
FN1-227ENST00000498719 TGIF2Q9GZN2 237 aa10.64□□□□□ -0.71
FN1-227ENST00000498719 DHX8Q14562 1220 aaKnown RBP10.63□□□□□ -0.71
FN1-227ENST00000498719 RHPN1Q8TCX5 695 aa10.63□□□□□ -0.71
FN1-227ENST00000498719 ASB16Q96NS5 453 aa10.63□□□□□ -0.71
FN1-227ENST00000498719 CCSER2Q9H7U1 834 aa10.63□□□□□ -0.71
FN1-227ENST00000498719 PXDNLA1KZ92 1463 aa10.63□□□□□ -0.71
FN1-227ENST00000498719 USP54Q70EL1 1684 aa10.63□□□□□ -0.71
FN1-227ENST00000498719 DSG2Q14126 1118 aa10.63□□□□□ -0.71
FN1-227ENST00000498719 UBE4AQ14139 1066 aa10.63□□□□□ -0.71
FN1-227ENST00000498719 BEND3Q5T5X7 828 aa10.63□□□□□ -0.71
FN1-227ENST00000498719 GET4Q7L5D6 327 aaPredicted RBP10.63□□□□□ -0.71
FN1-227ENST00000498719 PI4K2BQ8TCG2 481 aa10.63□□□□□ -0.71
FN1-227ENST00000498719 BABAM1Q9NWV8 329 aa10.63□□□□□ -0.71
FN1-227ENST00000498719 SWAP70Q9UH65 585 aa10.63□□□□□ -0.71
FN1-227ENST00000498719 MKRN1Q9UHC7 482 aaKnown RBP10.63□□□□□ -0.71
FN1-227ENST00000498719 PRAMEF22A3QJZ6 481 aa10.62□□□□□ -0.71
FN1-227ENST00000498719 ODR4Q5SWX8 454 aa10.62□□□□□ -0.71
FN1-227ENST00000498719 ZNF530Q6P9A1 599 aaPredicted RBP10.62□□□□□ -0.71
FN1-227ENST00000498719 DNAAF4Q8WXU2 420 aa10.62□□□□□ -0.71
FN1-227ENST00000498719 GPHNQ9NQX3 736 aaPredicted RBP10.62□□□□□ -0.71
FN1-227ENST00000498719 KLF15Q9UIH9 416 aa10.62□□□□□ -0.71
FN1-227ENST00000498719 NFAT5O94916 1531 aa10.62□□□□□ -0.71
FN1-227ENST00000498719 KDM3BQ7LBC6 1761 aa10.62□□□□□ -0.71
FN1-227ENST00000498719 BTBD11A6QL63 1104 aa10.62□□□□□ -0.71
FN1-227ENST00000498719 DTNBO60941 627 aa10.62□□□□□ -0.71
FN1-227ENST00000498719 DNAJC6O75061 913 aa10.62□□□□□ -0.71
FN1-227ENST00000498719 ZNF445P59923 1031 aa10.62□□□□□ -0.71
FN1-227ENST00000498719 TEFQ10587 303 aa10.62□□□□□ -0.71
FN1-227ENST00000498719 PROSER3Q2NL68 480 aa10.62□□□□□ -0.71
FN1-227ENST00000498719 RBSNQ9H1K0 784 aa10.62□□□□□ -0.71
FN1-227ENST00000498719 CHST12Q9NRB3 414 aa10.62□□□□□ -0.71
FN1-227ENST00000498719 TMEM63CQ9P1W3 806 aa10.62□□□□□ -0.71
FN1-227ENST00000498719 ATP9BO43861 1147 aa10.61□□□□□ -0.71
FN1-227ENST00000498719 GIGYF1O75420 1035 aaPredicted RBP10.61□□□□□ -0.71
FN1-227ENST00000498719 CUL4AQ13619 759 aa10.61□□□□□ -0.71
FN1-227ENST00000498719 EAPPQ56P03 285 aaPredicted RBP10.61□□□□□ -0.71
FN1-227ENST00000498719 CXorf38Q8TB03 319 aa10.61□□□□□ -0.71
FN1-227ENST00000498719 MPHOSPH6Q99547 160 aaKnown RBP10.61□□□□□ -0.71
FN1-227ENST00000498719 ADCY9O60503 1353 aa10.61□□□□□ -0.71
FN1-227ENST00000498719 CHD2O14647 1828 aaKnown RBP10.61□□□□□ -0.71
FN1-227ENST00000498719 H3BRB1 525 aa10.6□□□□□ -0.71
FN1-227ENST00000498719 CRTC2Q53ET0 693 aaPredicted RBP10.6□□□□□ -0.71
FN1-227ENST00000498719 CREBRFQ8IUR6 639 aa10.6□□□□□ -0.71
FN1-227ENST00000498719 TUT1Q9H6E5 874 aaKnown RBP10.6□□□□□ -0.71
FN1-227ENST00000498719 PXDNQ92626 1479 aa10.6□□□□□ -0.71
FN1-227ENST00000498719 MED1Q15648 1581 aaPredicted RBP10.6□□□□□ -0.71
FN1-227ENST00000498719 SYCE3A1L190 88 aa10.6□□□□□ -0.71
FN1-227ENST00000498719 TTC39BQ5VTQ0 682 aaPredicted RBP10.6□□□□□ -0.71
FN1-227ENST00000498719 CWC27Q6UX04 472 aaKnown RBP10.6□□□□□ -0.71
FN1-227ENST00000498719 ORAI2Q96SN7 254 aa10.6□□□□□ -0.71
FN1-227ENST00000498719 SPG7Q9UQ90 795 aa10.6□□□□□ -0.71
FN1-227ENST00000498719 PHF14O94880 888 aa10.59□□□□□ -0.71
FN1-227ENST00000498719 LDHAP00338 332 aaKnown RBP10.59□□□□□ -0.71
FN1-227ENST00000498719 ABL1P00519 1130 aa10.59□□□□□ -0.71
FN1-227ENST00000498719 HSPA4P34932 840 aa10.59□□□□□ -0.71
FN1-227ENST00000498719 USP5P45974 858 aa10.59□□□□□ -0.71
FN1-227ENST00000498719 MCM2P49736 904 aa10.59□□□□□ -0.71
FN1-227ENST00000498719 CCDC173Q0VFZ6 552 aa10.59□□□□□ -0.71
FN1-227ENST00000498719 ECM1Q16610 540 aa10.59□□□□□ -0.71
FN1-227ENST00000498719 CWF19L2Q2TBE0 894 aaKnown RBP10.59□□□□□ -0.71
FN1-227ENST00000498719 KIF1BPQ96EK5 621 aa10.59□□□□□ -0.71
FN1-227ENST00000498719 PA2G4Q9UQ80 394 aaKnown RBP10.59□□□□□ -0.71
FN1-227ENST00000498719 AOX1Q06278 1338 aa10.59□□□□□ -0.71
FN1-227ENST00000498719 TNFRSF10BO14763 440 aa10.59□□□□□ -0.71
FN1-227ENST00000498719 SGSM2O43147 1006 aa10.59□□□□□ -0.71
FN1-227ENST00000498719 CPA1P15085 419 aa10.59□□□□□ -0.71
FN1-227ENST00000498719 POLD1P28340 1107 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms