RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 NGDNQ8NEJ9 315 aaKnown RBP15.1■□□□□ 0.01
GAPVD1-220ENST00000497580 MRPS27Q92552 414 aaKnown RBP15.1■□□□□ 0.01
GAPVD1-220ENST00000497580 ZSCAN16Q9H4T2 348 aaPredicted RBP15.1■□□□□ 0.01
GAPVD1-220ENST00000497580 BICC1Q9H694 974 aaKnown RBP15.1■□□□□ 0.01
GAPVD1-220ENST00000497580 PPP2R2CQ9Y2T4 447 aa15.1■□□□□ 0.01
GAPVD1-220ENST00000497580 AATKQ6ZMQ8 1374 aa15.1■□□□□ 0.01
GAPVD1-220ENST00000497580 PLEKHG2Q9H7P9 1386 aa15.1■□□□□ 0.01
GAPVD1-220ENST00000497580 ATP8B1O43520 1251 aa15.09■□□□□ 0.01
GAPVD1-220ENST00000497580 IBSPP21815 317 aaPredicted RBP15.09■□□□□ 0.01
GAPVD1-220ENST00000497580 CYB5RLQ6IPT4 315 aa15.09■□□□□ 0.01
GAPVD1-220ENST00000497580 LMOD2Q6P5Q4 547 aa15.09■□□□□ 0.01
GAPVD1-220ENST00000497580 TTC41PQ6P2S7 1318 aa15.09■□□□□ 0.01
GAPVD1-220ENST00000497580 TMEM232C9JQI7 657 aa15.09■□□□□ 0.01
GAPVD1-220ENST00000497580 APOBRQ0VD83 1088 aa15.09■□□□□ 0.01
GAPVD1-220ENST00000497580 LZTFL1Q9NQ48 299 aa15.09■□□□□ 0.01
GAPVD1-220ENST00000497580 NDUFB9Q9Y6M9 179 aa15.09■□□□□ 0.01
GAPVD1-220ENST00000497580 CCDC61Q9Y6R9 512 aa15.09■□□□□ 0.01
GAPVD1-220ENST00000497580 ADCY9O60503 1353 aa15.09■□□□□ 0.01
GAPVD1-220ENST00000497580 ZNF396Q96N95 335 aaPredicted RBP15.09■□□□□ 0.01
GAPVD1-220ENST00000497580 EFCAB6Q5THR3 1501 aa15.09■□□□□ 0.01
GAPVD1-220ENST00000497580 MNAT1P51948 309 aa15.08■□□□□ 0.01
GAPVD1-220ENST00000497580 ZNF589Q86UQ0 364 aaPredicted RBP15.08■□□□□ 0.01
GAPVD1-220ENST00000497580 PPM1EQ8WY54 764 aa15.08■□□□□ 0.01
GAPVD1-220ENST00000497580 EVI5LQ96CN4 794 aa15.08■□□□□ 0.01
GAPVD1-220ENST00000497580 ERC1Q8IUD2 1116 aa15.08■□□□□ 0
GAPVD1-220ENST00000497580 MAP4K1Q92918 833 aa15.08■□□□□ 0
GAPVD1-220ENST00000497580 CDK12Q9NYV4 1490 aaPredicted RBP15.08■□□□□ 0
GAPVD1-220ENST00000497580 VWA3AA6NCI4 1184 aa15.08■□□□□ 0
GAPVD1-220ENST00000497580 ATP2B1P20020 1258 aa15.08■□□□□ 0
GAPVD1-220ENST00000497580 BANK1Q8NDB2 785 aa15.08■□□□□ 0
GAPVD1-220ENST00000497580 RBM33Q96EV2 1170 aaKnown RBP15.08■□□□□ 0
GAPVD1-220ENST00000497580 UBXN6Q9BZV1 441 aa15.08■□□□□ 0
GAPVD1-220ENST00000497580 KIAA1468Q9P260 1216 aa15.08■□□□□ 0
GAPVD1-220ENST00000497580 PCDHA7Q9UN72 937 aa15.08■□□□□ 0
GAPVD1-220ENST00000497580 EIF3JO75822 258 aaKnown RBP15.07■□□□□ 0
GAPVD1-220ENST00000497580 TFRCP02786 760 aaKnown RBP15.07■□□□□ 0
GAPVD1-220ENST00000497580 ADKP55263 362 aaKnown RBP15.07■□□□□ 0
GAPVD1-220ENST00000497580 CNNM3Q8NE01 707 aa15.07■□□□□ 0
GAPVD1-220ENST00000497580 BRMS1Q9HCU9 246 aa15.07■□□□□ 0
GAPVD1-220ENST00000497580 CHMP4BP1P59074 171 aa15.07■□□□□ 0
GAPVD1-220ENST00000497580 CCDC129Q6ZRS4 1044 aa15.07■□□□□ 0
GAPVD1-220ENST00000497580 NEK1Q96PY6 1258 aa15.07■□□□□ 0
GAPVD1-220ENST00000497580 PTPDC1A2A3K4 754 aa15.07■□□□□ 0
GAPVD1-220ENST00000497580 WDHD1O75717 1129 aaPredicted RBP15.07■□□□□ 0
GAPVD1-220ENST00000497580 LIG3P49916 1009 aa15.07■□□□□ 0
GAPVD1-220ENST00000497580 SCRN1Q12765 414 aa15.07■□□□□ 0
GAPVD1-220ENST00000497580 MTX1Q13505 466 aa15.07■□□□□ 0
GAPVD1-220ENST00000497580 NBPF6Q5VWK0 638 aa15.07■□□□□ 0
GAPVD1-220ENST00000497580 DNAAF4Q8WXU2 420 aa15.07■□□□□ 0
GAPVD1-220ENST00000497580 NBPF4Q96M43 638 aa15.07■□□□□ 0
GAPVD1-220ENST00000497580 RCOR1Q9UKL0 485 aa15.07■□□□□ 0
GAPVD1-220ENST00000497580 TXLNAP40222 546 aa15.06■□□□□ 0
GAPVD1-220ENST00000497580 HSP90AB4PQ58FF6 505 aa15.06■□□□□ 0
GAPVD1-220ENST00000497580 CHST3Q7LGC8 479 aa15.06■□□□□ 0
GAPVD1-220ENST00000497580 RAB11FIP4Q86YS3 637 aa15.06■□□□□ 0
GAPVD1-220ENST00000497580 RABGGTAQ92696 567 aa15.06■□□□□ 0
GAPVD1-220ENST00000497580 TOGARAM2Q6ZUX3 1019 aa15.06■□□□□ 0
GAPVD1-220ENST00000497580 GDAP1L1Q96MZ0 367 aa15.06■□□□□ 0
GAPVD1-220ENST00000497580 MPHOSPH8Q99549 860 aa15.06■□□□□ 0
GAPVD1-220ENST00000497580 C9orf78Q9NZ63 289 aaPredicted RBP15.06■□□□□ 0
GAPVD1-220ENST00000497580 ARAP3Q8WWN8 1544 aa15.06■□□□□ 0
GAPVD1-220ENST00000497580 TUBB4AP04350 444 aa15.06■□□□□ 0
GAPVD1-220ENST00000497580 CHGBP05060 677 aa15.06■□□□□ 0
GAPVD1-220ENST00000497580 TEFQ10587 303 aa15.06■□□□□ 0
GAPVD1-220ENST00000497580 CT47A1Q5JQC4 288 aaPredicted RBP15.06■□□□□ 0
GAPVD1-220ENST00000497580 HDXQ7Z353 690 aa15.06■□□□□ 0
GAPVD1-220ENST00000497580 ABCB6Q9NP58 842 aa15.06■□□□□ 0
GAPVD1-220ENST00000497580 KCND1Q9NSA2 647 aa15.06■□□□□ 0
GAPVD1-220ENST00000497580 AKAP2Q9Y2D5 859 aa15.05■□□□□ 0
GAPVD1-220ENST00000497580 MRFAP1Q9Y605 127 aa15.05■□□□□ 0
GAPVD1-220ENST00000497580 MAP2P11137 1827 aaKnown RBP15.05■□□□□ 0
GAPVD1-220ENST00000497580 PI4KAP2A4QPH2 592 aa15.05■□□□□ -0
GAPVD1-220ENST00000497580 CHRM1P11229 460 aaPredicted RBP15.05■□□□□ -0
GAPVD1-220ENST00000497580 STK11IPQ8N1F8 1099 aa15.05■□□□□ -0
GAPVD1-220ENST00000497580 PI4KAP1Q8N8J0 262 aa15.05■□□□□ -0
GAPVD1-220ENST00000497580 ENGASEQ8NFI3 743 aa15.05■□□□□ -0
GAPVD1-220ENST00000497580 BAG1Q99933 345 aaPredicted RBP15.05■□□□□ -0
GAPVD1-220ENST00000497580 TLR7Q9NYK1 1049 aaKnown RBP15.05■□□□□ -0
GAPVD1-220ENST00000497580 POGZQ7Z3K3 1410 aa15.05■□□□□ -0
GAPVD1-220ENST00000497580 MARCKSP29966 332 aaPredicted RBP15.05■□□□□ -0
GAPVD1-220ENST00000497580 ATP7BP35670 1465 aa15.05■□□□□ -0
GAPVD1-220ENST00000497580 CCDC151A5D8V7 595 aa15.04■□□□□ -0
GAPVD1-220ENST00000497580 CPLX3Q8WVH0 158 aa15.04■□□□□ -0
GAPVD1-220ENST00000497580 FAM212AQ96EL1 285 aa15.04■□□□□ -0
GAPVD1-220ENST00000497580 FAM204AQ9H8W3 233 aa15.04■□□□□ -0
GAPVD1-220ENST00000497580 ARHGEF28Q8N1W1 1705 aaKnown RBP15.04■□□□□ -0
GAPVD1-220ENST00000497580 IFT172Q9UG01 1749 aa15.04■□□□□ -0
GAPVD1-220ENST00000497580 ERLIN1O75477 346 aa15.04■□□□□ -0
GAPVD1-220ENST00000497580 ADD1P35611 737 aaKnown RBP15.04■□□□□ -0
GAPVD1-220ENST00000497580 KIF4BQ2VIQ3 1234 aa15.04■□□□□ -0
GAPVD1-220ENST00000497580 DLG5Q8TDM6 1919 aa15.04■□□□□ -0
GAPVD1-220ENST00000497580 MAP3K9P80192 1104 aa15.04■□□□□ -0
GAPVD1-220ENST00000497580 PSME1Q06323 249 aa15.04■□□□□ -0
GAPVD1-220ENST00000497580 PSD3Q9NYI0 1048 aa15.04■□□□□ -0
GAPVD1-220ENST00000497580 AIMP1Q12904 312 aaKnown RBP15.03■□□□□ -0
GAPVD1-220ENST00000497580 POLA2Q14181 598 aa15.03■□□□□ -0
GAPVD1-220ENST00000497580 TSGA10IPQ3SY00 556 aa15.03■□□□□ -0
GAPVD1-220ENST00000497580 LRRC31Q6UY01 552 aa15.03■□□□□ -0
GAPVD1-220ENST00000497580 CCDC91Q7Z6B0 441 aa15.03■□□□□ -0
GAPVD1-220ENST00000497580 FMR1NBQ8N0W7 255 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms