RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 EGFRP00533 1210 aa13.75□□□□□ -0.21
SHROOM3-210ENST00000497440 KLRK1P26718 216 aa13.75□□□□□ -0.21
SHROOM3-210ENST00000497440 LDHAL6AQ6ZMR3 332 aa13.75□□□□□ -0.21
SHROOM3-210ENST00000497440 USP17L1Q7RTZ2 530 aa13.75□□□□□ -0.21
SHROOM3-210ENST00000497440 MICALL2Q8IY33 904 aa13.75□□□□□ -0.21
SHROOM3-210ENST00000497440 ZNF594Q96JF6 807 aaPredicted RBP13.75□□□□□ -0.21
SHROOM3-210ENST00000497440 SPEF2Q9C093 1822 aa13.75□□□□□ -0.21
SHROOM3-210ENST00000497440 H7C1D1 291 aa13.74□□□□□ -0.21
SHROOM3-210ENST00000497440 SNAP23O00161 211 aa13.74□□□□□ -0.21
SHROOM3-210ENST00000497440 IL1R1P14778 569 aa13.74□□□□□ -0.21
SHROOM3-210ENST00000497440 CST9Q5W186 159 aa13.74□□□□□ -0.21
SHROOM3-210ENST00000497440 VGLL2Q8N8G2 317 aa13.74□□□□□ -0.21
SHROOM3-210ENST00000497440 CD209Q9NNX6 404 aa13.74□□□□□ -0.21
SHROOM3-210ENST00000497440 KIF16BQ96L93 1317 aa13.73□□□□□ -0.21
SHROOM3-210ENST00000497440 RASSF10A6NK89 507 aa13.73□□□□□ -0.21
SHROOM3-210ENST00000497440 TMEM88BA6NKF7 163 aa13.73□□□□□ -0.21
SHROOM3-210ENST00000497440 ZBTB22O15209 634 aa13.73□□□□□ -0.21
SHROOM3-210ENST00000497440 TAF5LO75529 589 aa13.73□□□□□ -0.21
SHROOM3-210ENST00000497440 HNRNPUQ00839 825 aaKnown RBP eCLIP13.73□□□□□ -0.21
SHROOM3-210ENST00000497440 UBE4AQ14139 1066 aa13.73□□□□□ -0.21
SHROOM3-210ENST00000497440 SAMD7Q7Z3H4 446 aa13.73□□□□□ -0.21
SHROOM3-210ENST00000497440 PUS3Q9BZE2 481 aaKnown RBP13.73□□□□□ -0.21
SHROOM3-210ENST00000497440 CLEC11AQ9Y240 323 aa13.73□□□□□ -0.21
SHROOM3-210ENST00000497440 FKBP1AP62942 108 aaKnown RBP13.72□□□□□ -0.21
SHROOM3-210ENST00000497440 PTPN12Q05209 780 aaKnown RBP13.72□□□□□ -0.21
SHROOM3-210ENST00000497440 ZBED3Q96IU2 234 aaPredicted RBP13.72□□□□□ -0.21
SHROOM3-210ENST00000497440 FBXO3Q9UK99 471 aa13.72□□□□□ -0.21
SHROOM3-210ENST00000497440 POLR2AP24928 1970 aaKnown RBP13.72□□□□□ -0.21
SHROOM3-210ENST00000497440 CNTNAP1P78357 1384 aa13.71□□□□□ -0.21
SHROOM3-210ENST00000497440 MROH5Q6ZUA9 1318 aa13.71□□□□□ -0.21
SHROOM3-210ENST00000497440 MYO3BQ8WXR4 1341 aa13.71□□□□□ -0.21
SHROOM3-210ENST00000497440 BCAR3O75815 825 aa13.71□□□□□ -0.21
SHROOM3-210ENST00000497440 USP17L8P0C7I0 530 aa13.71□□□□□ -0.21
SHROOM3-210ENST00000497440 TRIM27P14373 513 aa13.71□□□□□ -0.21
SHROOM3-210ENST00000497440 FMR1Q06787 632 aaKnown RBP eCLIP13.71□□□□□ -0.21
SHROOM3-210ENST00000497440 MTX1Q13505 466 aa13.71□□□□□ -0.21
SHROOM3-210ENST00000497440 ATF7IPQ6VMQ6 1270 aa13.71□□□□□ -0.21
SHROOM3-210ENST00000497440 CDC37L1Q7L3B6 337 aa13.71□□□□□ -0.21
SHROOM3-210ENST00000497440 HELBQ8NG08 1087 aaPredicted RBP13.71□□□□□ -0.21
SHROOM3-210ENST00000497440 FAM84BQ96KN1 310 aaPredicted RBP13.71□□□□□ -0.21
SHROOM3-210ENST00000497440 FAM205AQ6ZU69 1335 aa13.7□□□□□ -0.22
SHROOM3-210ENST00000497440 TRPM7Q96QT4 1865 aa13.7□□□□□ -0.22
SHROOM3-210ENST00000497440 IPO8O15397 1037 aaKnown RBP13.7□□□□□ -0.22
SHROOM3-210ENST00000497440 SASH1O94885 1247 aa13.7□□□□□ -0.22
SHROOM3-210ENST00000497440 FGFR2P21802 821 aa13.7□□□□□ -0.22
SHROOM3-210ENST00000497440 LRRC24Q50LG9 513 aa13.7□□□□□ -0.22
SHROOM3-210ENST00000497440 TTLL5Q6EMB2 1281 aa13.7□□□□□ -0.22
SHROOM3-210ENST00000497440 ATG9AQ7Z3C6 839 aa13.7□□□□□ -0.22
SHROOM3-210ENST00000497440 FBXO33Q7Z6M2 555 aa13.7□□□□□ -0.22
SHROOM3-210ENST00000497440 TDRD7Q8NHU6 1098 aaKnown RBP13.7□□□□□ -0.22
SHROOM3-210ENST00000497440 CNNM1Q9NRU3 951 aa13.7□□□□□ -0.22
SHROOM3-210ENST00000497440 TRAF5O00463 557 aa13.69□□□□□ -0.22
SHROOM3-210ENST00000497440 PDE8BO95263 885 aa13.69□□□□□ -0.22
SHROOM3-210ENST00000497440 TBC1D10BQ4KMP7 808 aaPredicted RBP13.69□□□□□ -0.22
SHROOM3-210ENST00000497440 CERS5Q8N5B7 392 aa13.69□□□□□ -0.22
SHROOM3-210ENST00000497440 MTMR14Q8NCE2 650 aa13.69□□□□□ -0.22
SHROOM3-210ENST00000497440 HHIPL1Q96JK4 782 aa13.69□□□□□ -0.22
SHROOM3-210ENST00000497440 GLIS2Q9BZE0 524 aaPredicted RBP13.69□□□□□ -0.22
SHROOM3-210ENST00000497440 COPRSQ9NQ92 184 aa13.69□□□□□ -0.22
SHROOM3-210ENST00000497440 CHMP3Q9Y3E7 222 aa13.69□□□□□ -0.22
SHROOM3-210ENST00000497440 PITPNM2Q9BZ72 1349 aa13.68□□□□□ -0.22
SHROOM3-210ENST00000497440 G3V3G9 751 aa13.68□□□□□ -0.22
SHROOM3-210ENST00000497440 EYA2O00167 538 aa13.68□□□□□ -0.22
SHROOM3-210ENST00000497440 KIF4BQ2VIQ3 1234 aa13.68□□□□□ -0.22
SHROOM3-210ENST00000497440 DCAF8Q5TAQ9 597 aa13.68□□□□□ -0.22
SHROOM3-210ENST00000497440 MEIS3Q99687 375 aa13.68□□□□□ -0.22
SHROOM3-210ENST00000497440 MXD3Q9BW11 206 aa13.68□□□□□ -0.22
SHROOM3-210ENST00000497440 MYOZ2Q9NPC6 264 aa13.68□□□□□ -0.22
SHROOM3-210ENST00000497440 HDAC5Q9UQL6 1122 aa13.68□□□□□ -0.22
SHROOM3-210ENST00000497440 TNNQ9UQP3 1299 aa13.68□□□□□ -0.22
SHROOM3-210ENST00000497440 CIAO1O76071 339 aa13.67□□□□□ -0.22
SHROOM3-210ENST00000497440 UBTFL1P0CB47 393 aaPredicted RBP13.67□□□□□ -0.22
SHROOM3-210ENST00000497440 SAPCD2Q86UD0 394 aa13.67□□□□□ -0.22
SHROOM3-210ENST00000497440 KLHDC4Q8TBB5 520 aa13.67□□□□□ -0.22
SHROOM3-210ENST00000497440 TLL2Q9Y6L7 1015 aa13.67□□□□□ -0.22
SHROOM3-210ENST00000497440 ASTN2O75129 1339 aaPredicted RBP13.66□□□□□ -0.22
SHROOM3-210ENST00000497440 WNT10BO00744 389 aa13.66□□□□□ -0.22
SHROOM3-210ENST00000497440 GNAI3P08754 354 aa13.66□□□□□ -0.22
SHROOM3-210ENST00000497440 KCNJ4P48050 445 aa13.66□□□□□ -0.22
SHROOM3-210ENST00000497440 VEGFBP49765 207 aa13.66□□□□□ -0.22
SHROOM3-210ENST00000497440 GTF2IP78347 998 aa13.66□□□□□ -0.22
SHROOM3-210ENST00000497440 SCARF1Q14162 830 aa13.66□□□□□ -0.22
SHROOM3-210ENST00000497440 DEFB115Q30KQ5 88 aa13.66□□□□□ -0.22
SHROOM3-210ENST00000497440 TAF7LQ5H9L4 462 aa13.66□□□□□ -0.22
SHROOM3-210ENST00000497440 ZNF804AQ7Z570 1209 aa13.66□□□□□ -0.22
SHROOM3-210ENST00000497440 LRRFIP2Q9Y608 721 aaKnown RBP13.66□□□□□ -0.22
SHROOM3-210ENST00000497440 HIBADHP31937 336 aaKnown RBP13.65□□□□□ -0.22
SHROOM3-210ENST00000497440 NBPF9Q3BBW0 867 aa13.65□□□□□ -0.22
SHROOM3-210ENST00000497440 USP48Q86UV5 1035 aa13.65□□□□□ -0.22
SHROOM3-210ENST00000497440 ZKSCAN2Q63HK3 967 aa13.64□□□□□ -0.23
SHROOM3-210ENST00000497440 DLK2Q6UY11 383 aa13.64□□□□□ -0.23
SHROOM3-210ENST00000497440 KRT26Q7Z3Y9 468 aa13.64□□□□□ -0.23
SHROOM3-210ENST00000497440 OGFOD1Q8N543 542 aa13.64□□□□□ -0.23
SHROOM3-210ENST00000497440 MRIQ9BWK5 157 aa13.64□□□□□ -0.23
SHROOM3-210ENST00000497440 MKRN1Q9UHC7 482 aaKnown RBP13.64□□□□□ -0.23
SHROOM3-210ENST00000497440 ZBTB7BO15156 539 aaPredicted RBP13.63□□□□□ -0.23
SHROOM3-210ENST00000497440 PLIN1O60240 522 aa13.63□□□□□ -0.23
SHROOM3-210ENST00000497440 CELF2O95319 508 aaKnown RBP13.63□□□□□ -0.23
SHROOM3-210ENST00000497440 GYG1P46976 350 aa13.63□□□□□ -0.23
SHROOM3-210ENST00000497440 METTL24Q5JXM2 366 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms