RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 ADAMTSL4Q6UY14 1074 aa8.9□□□□□ -0.98
SNX13-211ENST00000496855 SND1Q7KZF4 910 aaKnown RBP eCLIP8.9□□□□□ -0.98
SNX13-211ENST00000496855 FMR1NBQ8N0W7 255 aaPredicted RBP8.9□□□□□ -0.98
SNX13-211ENST00000496855 OSMRQ99650 979 aa8.9□□□□□ -0.98
SNX13-211ENST00000496855 ZKSCAN3Q9BRR0 538 aa8.9□□□□□ -0.98
SNX13-211ENST00000496855 LACRTQ9GZZ8 138 aa8.9□□□□□ -0.98
SNX13-211ENST00000496855 LATS2Q9NRM7 1088 aa8.9□□□□□ -0.98
SNX13-211ENST00000496855 PDE2AO00408 941 aaPredicted RBP8.89□□□□□ -0.99
SNX13-211ENST00000496855 EIF1AYO14602 144 aaKnown RBP8.89□□□□□ -0.99
SNX13-211ENST00000496855 HOMEZQ8IX15 550 aa8.89□□□□□ -0.99
SNX13-211ENST00000496855 GALNT12Q8IXK2 581 aa8.89□□□□□ -0.99
SNX13-211ENST00000496855 HHIPQ96QV1 700 aa8.89□□□□□ -0.99
SNX13-211ENST00000496855 DNAJC25Q9H1X3 360 aa8.89□□□□□ -0.99
SNX13-211ENST00000496855 ELNP15502 786 aa8.89□□□□□ -0.99
SNX13-211ENST00000496855 PTPRAP18433 802 aa8.89□□□□□ -0.99
SNX13-211ENST00000496855 CDC27P30260 824 aa8.89□□□□□ -0.99
SNX13-211ENST00000496855 PLA2G4EQ3MJ16 856 aa8.89□□□□□ -0.99
SNX13-211ENST00000496855 ZSCAN29Q8IWY8 852 aaPredicted RBP8.89□□□□□ -0.99
SNX13-211ENST00000496855 TMEM102Q8N9M5 508 aaPredicted RBP8.89□□□□□ -0.99
SNX13-211ENST00000496855 MUC3BQ9H195 1237 aa8.89□□□□□ -0.99
SNX13-211ENST00000496855 PPME1Q9Y570 386 aa8.89□□□□□ -0.99
SNX13-211ENST00000496855 TREHO43280 583 aa8.88□□□□□ -0.99
SNX13-211ENST00000496855 ITGB2P05107 769 aa8.88□□□□□ -0.99
SNX13-211ENST00000496855 DSC3Q14574 896 aa8.88□□□□□ -0.99
SNX13-211ENST00000496855 GRIK4Q16099 956 aa8.88□□□□□ -0.99
SNX13-211ENST00000496855 NXPE3Q969Y0 559 aa8.88□□□□□ -0.99
SNX13-211ENST00000496855 ASB16Q96NS5 453 aa8.88□□□□□ -0.99
SNX13-211ENST00000496855 CSRNP1Q96S65 589 aa8.88□□□□□ -0.99
SNX13-211ENST00000496855 ADAM19Q9H013 955 aa8.88□□□□□ -0.99
SNX13-211ENST00000496855 PLCB3Q01970 1234 aa8.87□□□□□ -0.99
SNX13-211ENST00000496855 FBXO11Q86XK2 927 aa8.87□□□□□ -0.99
SNX13-211ENST00000496855 DEAF1O75398 565 aaPredicted RBP8.86□□□□□ -0.99
SNX13-211ENST00000496855 APBA3O96018 575 aa8.86□□□□□ -0.99
SNX13-211ENST00000496855 BHLHE41Q9C0J9 482 aaPredicted RBP8.86□□□□□ -0.99
SNX13-211ENST00000496855 SH2B1Q9NRF2 756 aaPredicted RBP8.86□□□□□ -0.99
SNX13-211ENST00000496855 A0A1W2PP55 124 aa8.85□□□□□ -0.99
SNX13-211ENST00000496855 FAM177BA6PVY3 158 aa8.85□□□□□ -0.99
SNX13-211ENST00000496855 C1QTNF9BB2RNN3 333 aa8.85□□□□□ -0.99
SNX13-211ENST00000496855 EPHA1P21709 976 aa8.85□□□□□ -0.99
SNX13-211ENST00000496855 CHRNA4P43681 627 aa8.85□□□□□ -0.99
SNX13-211ENST00000496855 CD163Q86VB7 1156 aa8.85□□□□□ -0.99
SNX13-211ENST00000496855 MAP4K3Q8IVH8 894 aa8.85□□□□□ -0.99
SNX13-211ENST00000496855 CCDC74AQ96AQ1 378 aa8.85□□□□□ -0.99
SNX13-211ENST00000496855 NACC1Q96RE7 527 aa8.85□□□□□ -0.99
SNX13-211ENST00000496855 SRA1Q9HD15 236 aaKnown RBP8.85□□□□□ -0.99
SNX13-211ENST00000496855 NPHS2Q9NP85 383 aa8.85□□□□□ -0.99
SNX13-211ENST00000496855 LINC01387J3KSC0 135 aa8.84□□□□□ -0.99
SNX13-211ENST00000496855 SETDB1Q15047 1291 aa8.84□□□□□ -0.99
SNX13-211ENST00000496855 KIAA0319Q5VV43 1072 aa8.84□□□□□ -0.99
SNX13-211ENST00000496855 SELPP16109 830 aa8.83□□□□□ -1
SNX13-211ENST00000496855 CDC25BP30305 580 aa8.83□□□□□ -1
SNX13-211ENST00000496855 GPAT2Q6NUI2 795 aa8.83□□□□□ -1
SNX13-211ENST00000496855 TXNDC11Q6PKC3 985 aa8.83□□□□□ -1
SNX13-211ENST00000496855 BSNDQ8WZ55 320 aa8.83□□□□□ -1
SNX13-211ENST00000496855 SOX13Q9UN79 622 aa8.83□□□□□ -1
SNX13-211ENST00000496855 DLL1O00548 723 aa8.83□□□□□ -1
SNX13-211ENST00000496855 CABP4P57796 275 aa8.83□□□□□ -1
SNX13-211ENST00000496855 FMR1Q06787 632 aaKnown RBP eCLIP8.83□□□□□ -1
SNX13-211ENST00000496855 SHISA2Q6UWI4 295 aa8.83□□□□□ -1
SNX13-211ENST00000496855 CCNJLQ8IV13 435 aa8.83□□□□□ -1
SNX13-211ENST00000496855 ASAP3Q8TDY4 903 aa8.83□□□□□ -1
SNX13-211ENST00000496855 LENG1Q96BZ8 264 aaPredicted RBP8.83□□□□□ -1
SNX13-211ENST00000496855 TCF12Q99081 682 aa8.83□□□□□ -1
SNX13-211ENST00000496855 GZF1Q9H116 711 aaPredicted RBP8.83□□□□□ -1
SNX13-211ENST00000496855 LIN7BQ9HAP6 207 aa8.83□□□□□ -1
SNX13-211ENST00000496855 C9orf172C9J069 976 aa8.82□□□□□ -1
SNX13-211ENST00000496855 H3BRJ5 948 aa8.82□□□□□ -1
SNX13-211ENST00000496855 ENOX2Q16206 610 aaKnown RBP8.82□□□□□ -1
SNX13-211ENST00000496855 FAM117BQ6P1L5 589 aa8.82□□□□□ -1
SNX13-211ENST00000496855 DCAF11Q8TEB1 546 aa8.82□□□□□ -1
SNX13-211ENST00000496855 PNMA6FA0A0J9YX94 578 aa8.81□□□□□ -1
SNX13-211ENST00000496855 METTL12A8MUP2 240 aa8.81□□□□□ -1
SNX13-211ENST00000496855 IGHA1P01876 353 aa8.81□□□□□ -1
SNX13-211ENST00000496855 IGF2-ASQ6U949 168 aa8.81□□□□□ -1
SNX13-211ENST00000496855 EHD4Q9H223 541 aa8.81□□□□□ -1
SNX13-211ENST00000496855 MSTNO14793 375 aa8.8□□□□□ -1
SNX13-211ENST00000496855 FSCN2O14926 492 aa8.8□□□□□ -1
SNX13-211ENST00000496855 MAPK8P45983 427 aa8.8□□□□□ -1
SNX13-211ENST00000496855 VN1R5Q7Z5H4 357 aa8.8□□□□□ -1
SNX13-211ENST00000496855 GALNT11Q8NCW6 608 aa8.8□□□□□ -1
SNX13-211ENST00000496855 EPS8L3Q8TE67 593 aaKnown RBP8.8□□□□□ -1
SNX13-211ENST00000496855 WNT8BQ93098 351 aa8.8□□□□□ -1
SNX13-211ENST00000496855 SPOCK3Q9BQ16 436 aa8.8□□□□□ -1
SNX13-211ENST00000496855 GADD45BO75293 160 aaPredicted RBP8.79□□□□□ -1
SNX13-211ENST00000496855 GRIA4P48058 902 aa8.79□□□□□ -1
SNX13-211ENST00000496855 PIP4K2BP78356 416 aa8.79□□□□□ -1
SNX13-211ENST00000496855 NRG1Q02297 640 aaPredicted RBP8.79□□□□□ -1
SNX13-211ENST00000496855 KLHL23Q8NBE8 558 aa8.79□□□□□ -1
SNX13-211ENST00000496855 CARD10Q9BWT7 1032 aa8.79□□□□□ -1
SNX13-211ENST00000496855 SEC31BQ9NQW1 1179 aa8.79□□□□□ -1
SNX13-211ENST00000496855 USP21Q9UK80 565 aa8.79□□□□□ -1
SNX13-211ENST00000496855 A0A096LPE4 126 aa8.78□□□□□ -1
SNX13-211ENST00000496855 A0A1W2PPZ6 126 aa8.78□□□□□ -1
SNX13-211ENST00000496855 TM4SF5O14894 197 aa8.78□□□□□ -1
SNX13-211ENST00000496855 PROCP04070 461 aa8.78□□□□□ -1
SNX13-211ENST00000496855 ADGRE1Q14246 886 aa8.78□□□□□ -1
SNX13-211ENST00000496855 NLRP2Q9NX02 1062 aa8.78□□□□□ -1
SNX13-211ENST00000496855 CD68P34810 354 aaPredicted RBP8.77□□□□□ -1
SNX13-211ENST00000496855 GATA4P43694 442 aa8.77□□□□□ -1
SNX13-211ENST00000496855 IKBKEQ14164 716 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms