RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 DDX60Q8IY21 1712 aaKnown RBP12.83□□□□□ -0.36
SMARCAL1-213ENST00000496037 RIMBP2O15034 1052 aa12.83□□□□□ -0.36
SMARCAL1-213ENST00000496037 SLC9C1Q4G0N8 1177 aa12.83□□□□□ -0.36
SMARCAL1-213ENST00000496037 CD99L2Q8TCZ2 262 aa12.83□□□□□ -0.36
SMARCAL1-213ENST00000496037 DPF3Q92784 378 aa12.83□□□□□ -0.36
SMARCAL1-213ENST00000496037 C6orf229H3BNL8 230 aa12.82□□□□□ -0.36
SMARCAL1-213ENST00000496037 PLCG2P16885 1265 aa12.82□□□□□ -0.36
SMARCAL1-213ENST00000496037 TTLL7Q6ZT98 887 aa12.82□□□□□ -0.36
SMARCAL1-213ENST00000496037 ZNF34Q8IZ26 560 aa12.82□□□□□ -0.36
SMARCAL1-213ENST00000496037 EYA3Q99504 573 aa12.82□□□□□ -0.36
SMARCAL1-213ENST00000496037 UTP14AQ9BVJ6 771 aaKnown RBP12.82□□□□□ -0.36
SMARCAL1-213ENST00000496037 NSFL1CQ9UNZ2 370 aaKnown RBP12.82□□□□□ -0.36
SMARCAL1-213ENST00000496037 LAMB4A4D0S4 1761 aa12.81□□□□□ -0.36
SMARCAL1-213ENST00000496037 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.81□□□□□ -0.36
SMARCAL1-213ENST00000496037 MANSC4A6NHS7 340 aaPredicted RBP12.81□□□□□ -0.36
SMARCAL1-213ENST00000496037 POTEB2H3BUK9 544 aa12.81□□□□□ -0.36
SMARCAL1-213ENST00000496037 U2SURPO15042 1029 aaKnown RBP12.81□□□□□ -0.36
SMARCAL1-213ENST00000496037 INHBEP58166 350 aa12.81□□□□□ -0.36
SMARCAL1-213ENST00000496037 ZNF280AP59817 542 aaPredicted RBP12.81□□□□□ -0.36
SMARCAL1-213ENST00000496037 DOK7Q18PE1 504 aa12.81□□□□□ -0.36
SMARCAL1-213ENST00000496037 SLC10A5Q5PT55 438 aa12.81□□□□□ -0.36
SMARCAL1-213ENST00000496037 ARMC9Q7Z3E5 817 aa12.81□□□□□ -0.36
SMARCAL1-213ENST00000496037 ZFP91Q96JP5 570 aaPredicted RBP12.81□□□□□ -0.36
SMARCAL1-213ENST00000496037 KCNQ5Q9NR82 932 aa12.81□□□□□ -0.36
SMARCAL1-213ENST00000496037 KNSTRNQ9Y448 316 aa12.81□□□□□ -0.36
SMARCAL1-213ENST00000496037 G3V3G9 751 aa12.8□□□□□ -0.36
SMARCAL1-213ENST00000496037 MYCP01106 439 aaPredicted RBP12.8□□□□□ -0.36
SMARCAL1-213ENST00000496037 VIL1P09327 827 aaKnown RBP12.8□□□□□ -0.36
SMARCAL1-213ENST00000496037 IRX5P78411 483 aaPredicted RBP12.8□□□□□ -0.36
SMARCAL1-213ENST00000496037 ARHGEF6Q15052 776 aa12.8□□□□□ -0.36
SMARCAL1-213ENST00000496037 PRAMEF18Q5VWM3 479 aa12.8□□□□□ -0.36
SMARCAL1-213ENST00000496037 SPRYD7Q5W111 196 aa12.8□□□□□ -0.36
SMARCAL1-213ENST00000496037 RTF1Q92541 710 aaKnown RBP12.8□□□□□ -0.36
SMARCAL1-213ENST00000496037 NECTIN2Q92692 538 aa12.8□□□□□ -0.36
SMARCAL1-213ENST00000496037 COL25A1Q9BXS0 654 aaPredicted RBP12.8□□□□□ -0.36
SMARCAL1-213ENST00000496037 OCEL1Q9H607 264 aa12.8□□□□□ -0.36
SMARCAL1-213ENST00000496037 MYOZ2Q9NPC6 264 aa12.8□□□□□ -0.36
SMARCAL1-213ENST00000496037 SCAF8Q9UPN6 1271 aaKnown RBP12.8□□□□□ -0.36
SMARCAL1-213ENST00000496037 RRP7AQ9Y3A4 280 aaKnown RBP12.8□□□□□ -0.36
SMARCAL1-213ENST00000496037 LRRC37AA6NMS7 1700 aa12.79□□□□□ -0.36
SMARCAL1-213ENST00000496037 A0A1W2PPC1 479 aa12.79□□□□□ -0.36
SMARCAL1-213ENST00000496037 MYL6BP14649 208 aa12.79□□□□□ -0.36
SMARCAL1-213ENST00000496037 PTPN12Q05209 780 aaKnown RBP12.79□□□□□ -0.36
SMARCAL1-213ENST00000496037 OTUD7BQ6GQQ9 843 aa12.79□□□□□ -0.36
SMARCAL1-213ENST00000496037 GIGYF2Q6Y7W6 1299 aaKnown RBP12.79□□□□□ -0.36
SMARCAL1-213ENST00000496037 AGBL3Q8NEM8 1001 aa12.79□□□□□ -0.36
SMARCAL1-213ENST00000496037 SP3Q02447 781 aa12.78□□□□□ -0.36
SMARCAL1-213ENST00000496037 LRCH3Q96II8 777 aa12.78□□□□□ -0.36
SMARCAL1-213ENST00000496037 PRO3102Q9H379 93 aa12.78□□□□□ -0.36
SMARCAL1-213ENST00000496037 ANKRD36CQ5JPF3 1778 aa12.77□□□□□ -0.36
SMARCAL1-213ENST00000496037 USP17L8P0C7I0 530 aa12.77□□□□□ -0.37
SMARCAL1-213ENST00000496037 HCLS1P14317 486 aaPredicted RBP12.77□□□□□ -0.37
SMARCAL1-213ENST00000496037 CRHR2Q13324 411 aa12.77□□□□□ -0.37
SMARCAL1-213ENST00000496037 PRKG1Q13976 671 aa12.77□□□□□ -0.37
SMARCAL1-213ENST00000496037 RSBN1LQ6PCB5 846 aaPredicted RBP12.77□□□□□ -0.37
SMARCAL1-213ENST00000496037 ANKRD13DQ6ZTN6 518 aa12.77□□□□□ -0.37
SMARCAL1-213ENST00000496037 HTATIP2Q9BUP3 242 aa12.77□□□□□ -0.37
SMARCAL1-213ENST00000496037 POLLQ9UGP5 575 aa12.77□□□□□ -0.37
SMARCAL1-213ENST00000496037 NR2E3Q9Y5X4 410 aa12.77□□□□□ -0.37
SMARCAL1-213ENST00000496037 PTCH2Q9Y6C5 1203 aa12.77□□□□□ -0.37
SMARCAL1-213ENST00000496037 VCANP13611 3396 aa12.77□□□□□ -0.37
SMARCAL1-213ENST00000496037 IGF2BP3O00425 579 aaKnown RBP eCLIP12.76□□□□□ -0.37
SMARCAL1-213ENST00000496037 SOX1O00570 391 aaPredicted RBP12.76□□□□□ -0.37
SMARCAL1-213ENST00000496037 ZBTB48P10074 688 aaPredicted RBP12.76□□□□□ -0.37
SMARCAL1-213ENST00000496037 MCM10Q7L590 875 aa12.76□□□□□ -0.37
SMARCAL1-213ENST00000496037 ZC3H12CQ9C0D7 883 aaKnown RBP12.76□□□□□ -0.37
SMARCAL1-213ENST00000496037 LAMB2P55268 1798 aa12.76□□□□□ -0.37
SMARCAL1-213ENST00000496037 GPSM2P81274 684 aa12.75□□□□□ -0.37
SMARCAL1-213ENST00000496037 TRIM26Q12899 539 aaPredicted RBP12.75□□□□□ -0.37
SMARCAL1-213ENST00000496037 KDM3BQ7LBC6 1761 aa12.75□□□□□ -0.37
SMARCAL1-213ENST00000496037 ANGEL1Q9UNK9 670 aaKnown RBP12.75□□□□□ -0.37
SMARCAL1-213ENST00000496037 STXBP5LQ9Y2K9 1186 aa12.75□□□□□ -0.37
SMARCAL1-213ENST00000496037 SH3TC1Q8TE82 1336 aa12.74□□□□□ -0.37
SMARCAL1-213ENST00000496037 WTIPA6NIX2 430 aaPredicted RBP12.74□□□□□ -0.37
SMARCAL1-213ENST00000496037 LDLRAD1Q5T700 205 aa12.74□□□□□ -0.37
SMARCAL1-213ENST00000496037 MAMSTRQ6ZN01 415 aa12.74□□□□□ -0.37
SMARCAL1-213ENST00000496037 DEFB123Q8N688 67 aa12.74□□□□□ -0.37
SMARCAL1-213ENST00000496037 TBC1D16Q8TBP0 767 aa12.74□□□□□ -0.37
SMARCAL1-213ENST00000496037 SLC10A4Q96EP9 437 aa12.74□□□□□ -0.37
SMARCAL1-213ENST00000496037 PRKAR2BP31323 418 aa12.73□□□□□ -0.37
SMARCAL1-213ENST00000496037 NBPF9Q3BBW0 867 aa12.73□□□□□ -0.37
SMARCAL1-213ENST00000496037 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.73□□□□□ -0.37
SMARCAL1-213ENST00000496037 WNK4Q96J92 1243 aa12.73□□□□□ -0.37
SMARCAL1-213ENST00000496037 PHACTR3Q96KR7 559 aa12.73□□□□□ -0.37
SMARCAL1-213ENST00000496037 TRMT112Q9UI30 125 aaKnown RBP12.73□□□□□ -0.37
SMARCAL1-213ENST00000496037 SCN9AQ15858 1988 aa12.72□□□□□ -0.37
SMARCAL1-213ENST00000496037 COL3A1P02461 1466 aaPredicted RBP12.72□□□□□ -0.37
SMARCAL1-213ENST00000496037 STK25O00506 426 aa12.72□□□□□ -0.37
SMARCAL1-213ENST00000496037 UFL1O94874 794 aa12.72□□□□□ -0.37
SMARCAL1-213ENST00000496037 HSP90AB3PQ58FF7 597 aa12.72□□□□□ -0.37
SMARCAL1-213ENST00000496037 GPR153Q6NV75 609 aa12.72□□□□□ -0.37
SMARCAL1-213ENST00000496037 NKX2-3Q8TAU0 364 aa12.72□□□□□ -0.37
SMARCAL1-213ENST00000496037 SH3TC2Q8TF17 1288 aa12.72□□□□□ -0.37
SMARCAL1-213ENST00000496037 CELF1Q92879 486 aaKnown RBP12.72□□□□□ -0.37
SMARCAL1-213ENST00000496037 ERBB4Q15303 1308 aa12.71□□□□□ -0.37
SMARCAL1-213ENST00000496037 ZBTB7BO15156 539 aaPredicted RBP12.71□□□□□ -0.37
SMARCAL1-213ENST00000496037 CAP1Q01518 475 aa12.71□□□□□ -0.37
SMARCAL1-213ENST00000496037 DCTN1Q14203 1278 aa12.71□□□□□ -0.37
SMARCAL1-213ENST00000496037 TAF7Q15545 349 aaPredicted RBP12.71□□□□□ -0.37
SMARCAL1-213ENST00000496037 APOBEC3FQ8IUX4 373 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms