RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 XPO4Q9C0E2 1151 aaKnown RBP17.94■□□□□ 0.46
SDF4-207ENST00000494748 PSDA5PKW4 1024 aaPredicted RBP17.94■□□□□ 0.46
SDF4-207ENST00000494748 NCAPHQ15003 741 aa17.94■□□□□ 0.46
SDF4-207ENST00000494748 ZNF530Q6P9A1 599 aaPredicted RBP17.94■□□□□ 0.46
SDF4-207ENST00000494748 FAM193AP78312 1265 aa17.93■□□□□ 0.46
SDF4-207ENST00000494748 APOBRQ0VD83 1088 aa17.93■□□□□ 0.46
SDF4-207ENST00000494748 HSD3B7Q9H2F3 369 aa17.93■□□□□ 0.46
SDF4-207ENST00000494748 ARFGEF2Q9Y6D5 1785 aa17.93■□□□□ 0.46
SDF4-207ENST00000494748 ZRANB2O95218 330 aaKnown RBP eCLIP17.93■□□□□ 0.46
SDF4-207ENST00000494748 PLA2G4AP47712 749 aa17.93■□□□□ 0.46
SDF4-207ENST00000494748 FGD1P98174 961 aa17.93■□□□□ 0.46
SDF4-207ENST00000494748 TBX22Q9Y458 520 aa17.93■□□□□ 0.46
SDF4-207ENST00000494748 TNNI3KQ59H18 835 aa17.93■□□□□ 0.46
SDF4-207ENST00000494748 SYT10Q6XYQ8 523 aa17.93■□□□□ 0.46
SDF4-207ENST00000494748 LRRC59Q96AG4 307 aaKnown RBP17.93■□□□□ 0.46
SDF4-207ENST00000494748 FPGT-TNNI3KV9GXZ4 949 aa17.93■□□□□ 0.46
SDF4-207ENST00000494748 FDPSP14324 419 aaKnown RBP17.92■□□□□ 0.46
SDF4-207ENST00000494748 NDUFA8P51970 172 aa17.92■□□□□ 0.46
SDF4-207ENST00000494748 IRX5P78411 483 aaPredicted RBP17.92■□□□□ 0.46
SDF4-207ENST00000494748 NCOA5Q9HCD5 579 aaKnown RBP17.92■□□□□ 0.46
SDF4-207ENST00000494748 LMTK3Q96Q04 1460 aa17.92■□□□□ 0.46
SDF4-207ENST00000494748 C4AP0C0L4 1744 aa17.92■□□□□ 0.46
SDF4-207ENST00000494748 C4BP0C0L5 1744 aa17.92■□□□□ 0.46
SDF4-207ENST00000494748 SCN11AQ9UI33 1791 aa17.92■□□□□ 0.46
SDF4-207ENST00000494748 NEURL1BA8MQ27 555 aa17.92■□□□□ 0.46
SDF4-207ENST00000494748 MCMDC2Q4G0Z9 681 aa17.92■□□□□ 0.46
SDF4-207ENST00000494748 DHX32Q7L7V1 743 aaKnown RBP17.92■□□□□ 0.46
SDF4-207ENST00000494748 COPRSQ9NQ92 184 aa17.92■□□□□ 0.46
SDF4-207ENST00000494748 CYP2C19P33261 490 aa17.92■□□□□ 0.46
SDF4-207ENST00000494748 DDX21Q9NR30 783 aaKnown RBP eCLIP17.92■□□□□ 0.46
SDF4-207ENST00000494748 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.92■□□□□ 0.46
SDF4-207ENST00000494748 SH3TC1Q8TE82 1336 aa17.91■□□□□ 0.46
SDF4-207ENST00000494748 CARMIL3Q8ND23 1372 aa17.91■□□□□ 0.46
SDF4-207ENST00000494748 NPHP1O15259 732 aa17.91■□□□□ 0.46
SDF4-207ENST00000494748 HAUS7Q99871 368 aa17.91■□□□□ 0.46
SDF4-207ENST00000494748 RTEL1Q9NZ71 1219 aa17.91■□□□□ 0.46
SDF4-207ENST00000494748 KIAA1468Q9P260 1216 aa17.91■□□□□ 0.46
SDF4-207ENST00000494748 ECM29Q5VYK3 1845 aa17.91■□□□□ 0.46
SDF4-207ENST00000494748 PNMA6AP0CW24 399 aaPredicted RBP17.91■□□□□ 0.46
SDF4-207ENST00000494748 PTPN12Q05209 780 aaKnown RBP17.91■□□□□ 0.46
SDF4-207ENST00000494748 TFCP2Q12800 502 aa17.91■□□□□ 0.46
SDF4-207ENST00000494748 CCDC150Q8NCX0 1101 aa17.91■□□□□ 0.46
SDF4-207ENST00000494748 MRPS27Q92552 414 aaKnown RBP17.91■□□□□ 0.46
SDF4-207ENST00000494748 FBXW7Q969H0 707 aa17.91■□□□□ 0.46
SDF4-207ENST00000494748 IFNKQ9P0W0 207 aa17.91■□□□□ 0.46
SDF4-207ENST00000494748 A0A1B0GVL5 298 aa17.9■□□□□ 0.46
SDF4-207ENST00000494748 A0A1W2PQ27 194 aa17.9■□□□□ 0.46
SDF4-207ENST00000494748 A0A1W2PQ64 194 aa17.9■□□□□ 0.46
SDF4-207ENST00000494748 A0A1W2PQD8 194 aa17.9■□□□□ 0.46
SDF4-207ENST00000494748 ME1P48163 572 aa17.9■□□□□ 0.46
SDF4-207ENST00000494748 ADALQ6DHV7 355 aa17.9■□□□□ 0.46
SDF4-207ENST00000494748 TRIM65Q6PJ69 517 aa17.9■□□□□ 0.46
SDF4-207ENST00000494748 ZNF396Q96N95 335 aaPredicted RBP17.9■□□□□ 0.46
SDF4-207ENST00000494748 ESF1Q9H501 851 aaKnown RBP17.9■□□□□ 0.46
SDF4-207ENST00000494748 TULP2O00295 520 aa17.9■□□□□ 0.46
SDF4-207ENST00000494748 GCKRQ14397 625 aa17.9■□□□□ 0.46
SDF4-207ENST00000494748 PPFIA3O75145 1194 aa17.9■□□□□ 0.46
SDF4-207ENST00000494748 CCT2P78371 535 aaKnown RBP17.9■□□□□ 0.46
SDF4-207ENST00000494748 GUCY1B3Q02153 619 aa17.9■□□□□ 0.46
SDF4-207ENST00000494748 TMC6Q7Z403 805 aa17.9■□□□□ 0.46
SDF4-207ENST00000494748 PALLDQ8WX93 1383 aa17.89■□□□□ 0.45
SDF4-207ENST00000494748 BMS1Q14692 1282 aaKnown RBP17.89■□□□□ 0.45
SDF4-207ENST00000494748 CREBRFQ8IUR6 639 aa17.89■□□□□ 0.45
SDF4-207ENST00000494748 LINC00301Q8NCQ3 95 aa17.89■□□□□ 0.45
SDF4-207ENST00000494748 UBXN6Q9BZV1 441 aa17.89■□□□□ 0.45
SDF4-207ENST00000494748 NAT10Q9H0A0 1025 aaKnown RBP17.89■□□□□ 0.45
SDF4-207ENST00000494748 CCDC66A2RUB6 948 aa17.89■□□□□ 0.45
SDF4-207ENST00000494748 PDIA3P30101 505 aaKnown RBP17.89■□□□□ 0.45
SDF4-207ENST00000494748 AIMP1Q12904 312 aaKnown RBP17.89■□□□□ 0.45
SDF4-207ENST00000494748 DBNDD2Q9BQY9 259 aa17.89■□□□□ 0.45
SDF4-207ENST00000494748 RGPD5Q99666 1765 aa17.89■□□□□ 0.45
SDF4-207ENST00000494748 BBXQ8WY36 941 aaPredicted RBP17.88■□□□□ 0.45
SDF4-207ENST00000494748 ORC3Q9UBD5 711 aaPredicted RBP17.88■□□□□ 0.45
SDF4-207ENST00000494748 CLIC4Q9Y696 253 aa17.88■□□□□ 0.45
SDF4-207ENST00000494748 ERICH4A6NGS2 130 aa17.88■□□□□ 0.45
SDF4-207ENST00000494748 HMGB1P09429 215 aaKnown RBP17.88■□□□□ 0.45
SDF4-207ENST00000494748 DDX46Q7L014 1031 aaKnown RBP17.88■□□□□ 0.45
SDF4-207ENST00000494748 TMX1Q9H3N1 280 aa17.88■□□□□ 0.45
SDF4-207ENST00000494748 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.88■□□□□ 0.45
SDF4-207ENST00000494748 PHLPP2Q6ZVD8 1323 aa17.88■□□□□ 0.45
SDF4-207ENST00000494748 LRP10Q7Z4F1 713 aa17.88■□□□□ 0.45
SDF4-207ENST00000494748 NOL10Q9BSC4 688 aaKnown RBP17.88■□□□□ 0.45
SDF4-207ENST00000494748 PLEKHO1Q53GL0 409 aaPredicted RBP17.87■□□□□ 0.45
SDF4-207ENST00000494748 CAPN2P17655 700 aa17.87■□□□□ 0.45
SDF4-207ENST00000494748 RABL6Q3YEC7 729 aaPredicted RBP17.87■□□□□ 0.45
SDF4-207ENST00000494748 ARHGAP29Q52LW3 1261 aa17.87■□□□□ 0.45
SDF4-207ENST00000494748 DNAJC2Q99543 621 aaKnown RBP17.87■□□□□ 0.45
SDF4-207ENST00000494748 TIGD1Q96MW7 591 aa17.86■□□□□ 0.45
SDF4-207ENST00000494748 E7EWF7 191 aa17.86■□□□□ 0.45
SDF4-207ENST00000494748 EVCP57679 992 aa17.86■□□□□ 0.45
SDF4-207ENST00000494748 ETF1P62495 437 aaKnown RBP17.86■□□□□ 0.45
SDF4-207ENST00000494748 KBTBD3Q8NAB2 608 aa17.86■□□□□ 0.45
SDF4-207ENST00000494748 ZNF274Q96GC6 653 aaPredicted RBP17.86■□□□□ 0.45
SDF4-207ENST00000494748 SPEF2Q9C093 1822 aa17.86■□□□□ 0.45
SDF4-207ENST00000494748 SMC2O95347 1197 aa17.86■□□□□ 0.45
SDF4-207ENST00000494748 DDX58O95786 925 aaKnown RBP17.86■□□□□ 0.45
SDF4-207ENST00000494748 SFPQP23246 707 aaKnown RBP eCLIP17.86■□□□□ 0.453e-6■■■■■ 27.1
SDF4-207ENST00000494748 NLRP12P59046 1061 aa17.86■□□□□ 0.45
SDF4-207ENST00000494748 DSCC1Q9BVC3 393 aa17.86■□□□□ 0.45
SDF4-207ENST00000494748 TADA3O75528 432 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms