RNA–Protein interactions for RNA: ENST00000493594.6

GBP3-208, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-208ENST00000493594 KRT32Q14532 448 aa9.69□□□□□ -0.86
GBP3-208ENST00000493594 LRRFIP1Q32MZ4 808 aaKnown RBP9.69□□□□□ -0.86
GBP3-208ENST00000493594 TSGA10IPQ3SY00 556 aa9.69□□□□□ -0.86
GBP3-208ENST00000493594 HSP90AA4PQ58FG1 418 aa9.69□□□□□ -0.86
GBP3-208ENST00000493594 ILDR1Q86SU0 546 aaPredicted RBP9.69□□□□□ -0.86
GBP3-208ENST00000493594 SMARCC2Q8TAQ2 1214 aa9.69□□□□□ -0.86
GBP3-208ENST00000493594 ZSWIM4Q9H7M6 989 aa9.69□□□□□ -0.86
GBP3-208ENST00000493594 COL15A1P39059 1388 aa9.69□□□□□ -0.86
GBP3-208ENST00000493594 MED23Q9ULK4 1368 aa9.69□□□□□ -0.86
GBP3-208ENST00000493594 SERPINC1P01008 464 aa9.69□□□□□ -0.86
GBP3-208ENST00000493594 SLC3A2P08195 630 aaKnown RBP9.69□□□□□ -0.86
GBP3-208ENST00000493594 NCAPHQ15003 741 aa9.69□□□□□ -0.86
GBP3-208ENST00000493594 MUM1L1Q5H9M0 696 aa9.69□□□□□ -0.86
GBP3-208ENST00000493594 CCDC158Q5M9N0 1113 aa9.69□□□□□ -0.86
GBP3-208ENST00000493594 NAA16Q6N069 864 aaPredicted RBP9.69□□□□□ -0.86
GBP3-208ENST00000493594 BICC1Q9H694 974 aaKnown RBP9.69□□□□□ -0.86
GBP3-208ENST00000493594 SNRKQ9NRH2 765 aa9.69□□□□□ -0.86
GBP3-208ENST00000493594 ADAM21Q9UKJ8 722 aa9.69□□□□□ -0.86
GBP3-208ENST00000493594 CLIC4Q9Y696 253 aa9.69□□□□□ -0.86
GBP3-208ENST00000493594 ALDH1L1O75891 902 aa9.68□□□□□ -0.86
GBP3-208ENST00000493594 RGPD1P0DJD0 1748 aa9.68□□□□□ -0.86
GBP3-208ENST00000493594 UBASH3AP57075 661 aa9.68□□□□□ -0.86
GBP3-208ENST00000493594 GNG11P61952 73 aa9.68□□□□□ -0.86
GBP3-208ENST00000493594 AIMP1Q12904 312 aaKnown RBP9.68□□□□□ -0.86
GBP3-208ENST00000493594 STK38Q15208 465 aa9.68□□□□□ -0.86
GBP3-208ENST00000493594 PROSER3Q2NL68 480 aa9.68□□□□□ -0.86
GBP3-208ENST00000493594 CFAP100Q494V2 611 aa9.68□□□□□ -0.86
GBP3-208ENST00000493594 STOX1Q6ZVD7 989 aa9.68□□□□□ -0.86
GBP3-208ENST00000493594 SUCLG2Q96I99 432 aa9.68□□□□□ -0.86
GBP3-208ENST00000493594 WDR24Q96S15 920 aa9.68□□□□□ -0.86
GBP3-208ENST00000493594 PARD6BQ9BYG5 372 aa9.68□□□□□ -0.86
GBP3-208ENST00000493594 UBXN6Q9BZV1 441 aa9.68□□□□□ -0.86
GBP3-208ENST00000493594 ARFGAP3Q9NP61 516 aa9.68□□□□□ -0.86
GBP3-208ENST00000493594 DIP2CQ9Y2E4 1556 aa9.68□□□□□ -0.86
GBP3-208ENST00000493594 CRYBG1Q9Y4K1 1723 aa9.68□□□□□ -0.86
GBP3-208ENST00000493594 PFKFB2O60825 505 aa9.68□□□□□ -0.86
GBP3-208ENST00000493594 TUBB4AP04350 444 aa9.68□□□□□ -0.86
GBP3-208ENST00000493594 ADALQ6DHV7 355 aa9.68□□□□□ -0.86
GBP3-208ENST00000493594 KAZALD1Q96I82 304 aa9.68□□□□□ -0.86
GBP3-208ENST00000493594 SRRTQ9BXP5 876 aaKnown RBP9.68□□□□□ -0.86
GBP3-208ENST00000493594 SBNO1A3KN83 1393 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 RIMBP3CA6NJZ7 1639 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 RIMBP3BA6NNM3 1639 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 RIMBP3Q9UFD9 1639 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 A0A0G2JLW4 131 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 TMEM232C9JQI7 657 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 CASQ1P31415 396 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 NLRP6P59044 892 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 IRX3P78415 501 aaPredicted RBP9.67□□□□□ -0.86
GBP3-208ENST00000493594 USPL1Q5W0Q7 1092 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 FUT8Q9BYC5 575 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 GJB4Q9NTQ9 266 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 A2ML1A8K2U0 1454 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 USP6P35125 1406 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 PLEKHG3A1L390 1219 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 VWA3AA6NCI4 1184 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 CCP110O43303 1012 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 ATP8B1O43520 1251 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 ZNF202O95125 648 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 TPM1P09493 284 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 KCNJ6P48051 423 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 NLRP12P59046 1061 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 PPP2R3AQ06190 1150 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 GPR161Q8N6U8 529 aaKnown RBP9.67□□□□□ -0.86
GBP3-208ENST00000493594 PDILTQ8N807 584 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 NGDNQ8NEJ9 315 aaKnown RBP9.67□□□□□ -0.86
GBP3-208ENST00000493594 AK7Q96M32 723 aa9.67□□□□□ -0.86
GBP3-208ENST00000493594 CHD2O14647 1828 aaKnown RBP9.67□□□□□ -0.86
GBP3-208ENST00000493594 USP31Q70CQ4 1352 aa9.66□□□□□ -0.86
GBP3-208ENST00000493594 ITSN1Q15811 1721 aa9.66□□□□□ -0.86
GBP3-208ENST00000493594 PRAMEF22A3QJZ6 481 aa9.66□□□□□ -0.86
GBP3-208ENST00000493594 H3BQF6 201 aa9.66□□□□□ -0.86
GBP3-208ENST00000493594 MCM6Q14566 821 aa9.66□□□□□ -0.86
GBP3-208ENST00000493594 DDX46Q7L014 1031 aaKnown RBP9.66□□□□□ -0.86
GBP3-208ENST00000493594 LINC00301Q8NCQ3 95 aa9.66□□□□□ -0.86
GBP3-208ENST00000493594 FBXO18Q8NFZ0 1043 aa9.66□□□□□ -0.86
GBP3-208ENST00000493594 LLPHQ9BRT6 129 aaKnown RBP9.66□□□□□ -0.86
GBP3-208ENST00000493594 HSD3B7Q9H2F3 369 aa9.66□□□□□ -0.86
GBP3-208ENST00000493594 CWC15Q9P013 229 aaKnown RBP9.66□□□□□ -0.86
GBP3-208ENST00000493594 PPP2R2CQ9Y2T4 447 aa9.66□□□□□ -0.86
GBP3-208ENST00000493594 CACNA1FO60840 1977 aa9.66□□□□□ -0.86
GBP3-208ENST00000493594 AKAP12Q02952 1782 aa9.66□□□□□ -0.86
GBP3-208ENST00000493594 ROBO2Q9HCK4 1378 aa9.66□□□□□ -0.86
GBP3-208ENST00000493594 BTBD11A6QL63 1104 aa9.66□□□□□ -0.86
GBP3-208ENST00000493594 ZSCAN12O43309 604 aa9.66□□□□□ -0.86
GBP3-208ENST00000493594 DHX16O60231 1041 aaKnown RBP9.66□□□□□ -0.86
GBP3-208ENST00000493594 TOP1P11387 765 aaKnown RBP9.66□□□□□ -0.86
GBP3-208ENST00000493594 MAP3K9P80192 1104 aa9.66□□□□□ -0.86
GBP3-208ENST00000493594 DHX32Q7L7V1 743 aaKnown RBP9.66□□□□□ -0.86
GBP3-208ENST00000493594 GOLGA5Q8TBA6 731 aa9.66□□□□□ -0.86
GBP3-208ENST00000493594 BPIFA3Q9BQP9 254 aa9.66□□□□□ -0.86
GBP3-208ENST00000493594 VPS18Q9P253 973 aa9.66□□□□□ -0.86
GBP3-208ENST00000493594 RRP15Q9Y3B9 282 aaKnown RBP9.66□□□□□ -0.86
GBP3-208ENST00000493594 SPATA31D1Q6ZQQ2 1576 aa9.65□□□□□ -0.86
GBP3-208ENST00000493594 GRM8O00222 908 aa9.65□□□□□ -0.86
GBP3-208ENST00000493594 FDPSP14324 419 aaKnown RBP9.65□□□□□ -0.86
GBP3-208ENST00000493594 MARCKSP29966 332 aaPredicted RBP9.65□□□□□ -0.86
GBP3-208ENST00000493594 LONRF2Q1L5Z9 754 aa9.65□□□□□ -0.86
GBP3-208ENST00000493594 SRLQ86TD4 932 aa9.65□□□□□ -0.86
GBP3-208ENST00000493594 RAB11FIP4Q86YS3 637 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms