RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 ADAM19Q9H013 955 aa6.6□□□□□ -1.35
PTCD3-218ENST00000493430 KANSL3Q9P2N6 904 aa6.6□□□□□ -1.35
PTCD3-218ENST00000493430 SALL4Q9UJQ4 1053 aa6.6□□□□□ -1.35
PTCD3-218ENST00000493430 PPP1R15AO75807 674 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-218ENST00000493430 WISP1O95388 367 aa6.59□□□□□ -1.35
PTCD3-218ENST00000493430 PDGFAP04085 211 aa6.59□□□□□ -1.35
PTCD3-218ENST00000493430 EPHA1P21709 976 aa6.59□□□□□ -1.35
PTCD3-218ENST00000493430 MZF1P28698 734 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-218ENST00000493430 EIF1AXP47813 144 aaKnown RBP6.59□□□□□ -1.35
PTCD3-218ENST00000493430 CABP4P57796 275 aa6.59□□□□□ -1.35
PTCD3-218ENST00000493430 DUOXA2Q1HG44 320 aa6.59□□□□□ -1.35
PTCD3-218ENST00000493430 ALKBH2Q6NS38 261 aa6.59□□□□□ -1.35
PTCD3-218ENST00000493430 ADAMTSL4Q6UY14 1074 aa6.59□□□□□ -1.35
PTCD3-218ENST00000493430 ACAD11Q709F0 780 aa6.59□□□□□ -1.35
PTCD3-218ENST00000493430 C1orf127Q8N9H9 656 aa6.59□□□□□ -1.35
PTCD3-218ENST00000493430 UBL7Q96S82 380 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-218ENST00000493430 CARD10Q9BWT7 1032 aa6.59□□□□□ -1.35
PTCD3-218ENST00000493430 GGNBP2Q9H3C7 697 aa6.59□□□□□ -1.35
PTCD3-218ENST00000493430 KCNK4Q9NYG8 393 aa6.59□□□□□ -1.35
PTCD3-218ENST00000493430 STOML1Q9UBI4 398 aa6.59□□□□□ -1.35
PTCD3-218ENST00000493430 RAXQ9Y2V3 346 aa6.59□□□□□ -1.35
PTCD3-218ENST00000493430 GTF3C3Q9Y5Q9 886 aa6.59□□□□□ -1.35
PTCD3-218ENST00000493430 TM4SF5O14894 197 aa6.58□□□□□ -1.36
PTCD3-218ENST00000493430 DHX15O43143 795 aaKnown RBP6.58□□□□□ -1.36
PTCD3-218ENST00000493430 MPSTP25325 297 aa6.58□□□□□ -1.36
PTCD3-218ENST00000493430 SSFA2P28290 1259 aa6.58□□□□□ -1.36
PTCD3-218ENST00000493430 WNT8BQ93098 351 aa6.58□□□□□ -1.36
PTCD3-218ENST00000493430 KRTAP4-8Q9BYQ9 185 aa6.58□□□□□ -1.36
PTCD3-218ENST00000493430 SEC31BQ9NQW1 1179 aa6.58□□□□□ -1.36
PTCD3-218ENST00000493430 TMEM88BA6NKF7 163 aa6.57□□□□□ -1.36
PTCD3-218ENST00000493430 H3BRJ5 948 aa6.57□□□□□ -1.36
PTCD3-218ENST00000493430 PDE2AO00408 941 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-218ENST00000493430 GSC2O15499 205 aa6.57□□□□□ -1.36
PTCD3-218ENST00000493430 PIP4K2BP78356 416 aa6.57□□□□□ -1.36
PTCD3-218ENST00000493430 AAMPQ13685 434 aa6.57□□□□□ -1.36
PTCD3-218ENST00000493430 UVSSAQ2YD98 709 aa6.57□□□□□ -1.36
PTCD3-218ENST00000493430 CCDC82Q8N4S0 544 aa6.57□□□□□ -1.36
PTCD3-218ENST00000493430 KLHDC7BQ96G42 594 aa6.57□□□□□ -1.36
PTCD3-218ENST00000493430 DZANK1Q9NVP4 752 aa6.57□□□□□ -1.36
PTCD3-218ENST00000493430 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-218ENST00000493430 A6NHS1 94 aa6.56□□□□□ -1.36
PTCD3-218ENST00000493430 NFKBIEO00221 500 aa6.56□□□□□ -1.36
PTCD3-218ENST00000493430 DDX3YO15523 660 aaKnown RBP6.56□□□□□ -1.36
PTCD3-218ENST00000493430 KIAA1211Q6ZU35 1233 aa6.56□□□□□ -1.36
PTCD3-218ENST00000493430 OSGEPQ9NPF4 335 aa6.56□□□□□ -1.36
PTCD3-218ENST00000493430 MTMR7Q9Y216 660 aa6.56□□□□□ -1.36
PTCD3-218ENST00000493430 FAM13AO94988 1023 aa6.55□□□□□ -1.36
PTCD3-218ENST00000493430 IGLV1-40P01703 118 aa6.55□□□□□ -1.36
PTCD3-218ENST00000493430 ACPPP15309 386 aa6.55□□□□□ -1.36
PTCD3-218ENST00000493430 MTMR3Q13615 1198 aa6.55□□□□□ -1.36
PTCD3-218ENST00000493430 ARMC10Q8N2F6 343 aa6.55□□□□□ -1.36
PTCD3-218ENST00000493430 FOXD4L4Q8WXT5 416 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-218ENST00000493430 UTP4Q969X6 686 aaKnown RBP6.55□□□□□ -1.36
PTCD3-218ENST00000493430 FAM46AQ96IP4 442 aaKnown RBP6.55□□□□□ -1.36
PTCD3-218ENST00000493430 CHRDQ9H2X0 955 aa6.55□□□□□ -1.36
PTCD3-218ENST00000493430 PCMTD2Q9NV79 361 aa6.55□□□□□ -1.36
PTCD3-218ENST00000493430 POLIQ9UNA4 740 aa6.55□□□□□ -1.36
PTCD3-218ENST00000493430 ADAM11O75078 769 aa6.54□□□□□ -1.36
PTCD3-218ENST00000493430 NPR3P17342 541 aa6.54□□□□□ -1.36
PTCD3-218ENST00000493430 USP5P45974 858 aa6.54□□□□□ -1.36
PTCD3-218ENST00000493430 ARL4DP49703 201 aa6.54□□□□□ -1.36
PTCD3-218ENST00000493430 EHHADHQ08426 723 aa6.54□□□□□ -1.36
PTCD3-218ENST00000493430 TMEM102Q8N9M5 508 aaPredicted RBP6.54□□□□□ -1.36
PTCD3-218ENST00000493430 UBASH3BQ8TF42 649 aa6.54□□□□□ -1.36
PTCD3-218ENST00000493430 SART1O43290 800 aaKnown RBP6.53□□□□□ -1.36
PTCD3-218ENST00000493430 PHACTR2O75167 634 aa6.53□□□□□ -1.36
PTCD3-218ENST00000493430 TRPA1O75762 1119 aa6.53□□□□□ -1.36
PTCD3-218ENST00000493430 EDN3P14138 238 aa6.53□□□□□ -1.36
PTCD3-218ENST00000493430 SSTR4P31391 388 aa6.53□□□□□ -1.36
PTCD3-218ENST00000493430 SLC7A3Q8WY07 619 aa6.53□□□□□ -1.36
PTCD3-218ENST00000493430 NXPE3Q969Y0 559 aa6.53□□□□□ -1.36
PTCD3-218ENST00000493430 MYRFLQ96LU7 910 aa6.53□□□□□ -1.36
PTCD3-218ENST00000493430 OSMRQ99650 979 aa6.53□□□□□ -1.36
PTCD3-218ENST00000493430 EREGO14944 169 aa6.52□□□□□ -1.37
PTCD3-218ENST00000493430 TNFRSF21O75509 655 aa6.52□□□□□ -1.37
PTCD3-218ENST00000493430 NLRP12P59046 1061 aa6.52□□□□□ -1.37
PTCD3-218ENST00000493430 FKBP4Q02790 459 aaKnown RBP eCLIP6.52□□□□□ -1.37
PTCD3-218ENST00000493430 C19orf57Q0VDD7 668 aa6.52□□□□□ -1.37
PTCD3-218ENST00000493430 SF3B2Q13435 895 aaKnown RBP6.52□□□□□ -1.37
PTCD3-218ENST00000493430 ANKRD34AQ69YU3 496 aa6.52□□□□□ -1.37
PTCD3-218ENST00000493430 SNX29Q8TEQ0 813 aa6.52□□□□□ -1.37
PTCD3-218ENST00000493430 BSNDQ8WZ55 320 aa6.52□□□□□ -1.37
PTCD3-218ENST00000493430 HHIPQ96QV1 700 aa6.52□□□□□ -1.37
PTCD3-218ENST00000493430 ZKSCAN3Q9BRR0 538 aa6.52□□□□□ -1.37
PTCD3-218ENST00000493430 RNF208Q9H0X6 261 aa6.52□□□□□ -1.37
PTCD3-218ENST00000493430 SOX13Q9UN79 622 aa6.52□□□□□ -1.37
PTCD3-218ENST00000493430 COBLO75128 1261 aa6.51□□□□□ -1.37
PTCD3-218ENST00000493430 CD97P48960 835 aa6.51□□□□□ -1.37
PTCD3-218ENST00000493430 NFIAQ12857 509 aa6.51□□□□□ -1.37
PTCD3-218ENST00000493430 CLEC10AQ8IUN9 316 aa6.51□□□□□ -1.37
PTCD3-218ENST00000493430 TRIM42Q8IWZ5 723 aa6.51□□□□□ -1.37
PTCD3-218ENST00000493430 RUSC1Q9BVN2 902 aa6.51□□□□□ -1.37
PTCD3-218ENST00000493430 C7orf69Q9H7B7 122 aa6.51□□□□□ -1.37
PTCD3-218ENST00000493430 HMX2A2RU54 273 aa6.5□□□□□ -1.37
PTCD3-218ENST00000493430 SOX1O00570 391 aaPredicted RBP6.5□□□□□ -1.37
PTCD3-218ENST00000493430 BMP3P12645 472 aa6.5□□□□□ -1.37
PTCD3-218ENST00000493430 IKBKEQ14164 716 aa6.5□□□□□ -1.37
PTCD3-218ENST00000493430 RNF43Q68DV7 783 aa6.5□□□□□ -1.37
PTCD3-218ENST00000493430 PHLDB3Q6NSJ2 640 aa6.5□□□□□ -1.37
PTCD3-218ENST00000493430 FDX2Q6P4F2 183 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms