RNA–Protein interactions for RNA: ENST00000492692.1

CSMD3-206, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 1,830 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-206ENST00000492692 TTLL7Q6ZT98 887 aa12.78□□□□□ -0.36
CSMD3-206ENST00000492692 SAMD3Q8N6K7 520 aa12.78□□□□□ -0.36
CSMD3-206ENST00000492692 CXorf38Q8TB03 319 aa12.78□□□□□ -0.36
CSMD3-206ENST00000492692 HDAC7Q8WUI4 952 aa12.78□□□□□ -0.36
CSMD3-206ENST00000492692 YIPF2Q9BWQ6 316 aa12.78□□□□□ -0.36
CSMD3-206ENST00000492692 FRMD4BQ9Y2L6 1034 aa12.78□□□□□ -0.36
CSMD3-206ENST00000492692 FAM169AQ9Y6X4 670 aa12.78□□□□□ -0.36
CSMD3-206ENST00000492692 PPRC1Q5VV67 1664 aaKnown RBP12.78□□□□□ -0.36
CSMD3-206ENST00000492692 ABCA6Q8N139 1617 aa12.78□□□□□ -0.36
CSMD3-206ENST00000492692 RTL1A6NKG5 1358 aa12.78□□□□□ -0.36
CSMD3-206ENST00000492692 FCHSD2O94868 740 aa12.78□□□□□ -0.36
CSMD3-206ENST00000492692 CCDC192P0DO97 292 aa12.78□□□□□ -0.36
CSMD3-206ENST00000492692 DHX8Q14562 1220 aaKnown RBP12.78□□□□□ -0.36
CSMD3-206ENST00000492692 MYSM1Q5VVJ2 828 aa12.78□□□□□ -0.36
CSMD3-206ENST00000492692 LRRC8AQ8IWT6 810 aa12.78□□□□□ -0.36
CSMD3-206ENST00000492692 SMCR8Q8TEV9 937 aaPredicted RBP12.78□□□□□ -0.36
CSMD3-206ENST00000492692 MAP3K5Q99683 1374 aa12.78□□□□□ -0.36
CSMD3-206ENST00000492692 MED14O60244 1454 aa12.77□□□□□ -0.36
CSMD3-206ENST00000492692 PSDA5PKW4 1024 aaPredicted RBP12.77□□□□□ -0.37
CSMD3-206ENST00000492692 IPO5O00410 1097 aaKnown RBP12.77□□□□□ -0.37
CSMD3-206ENST00000492692 EZRP15311 586 aaKnown RBP12.77□□□□□ -0.37
CSMD3-206ENST00000492692 ZNF24P17028 368 aa12.77□□□□□ -0.37
CSMD3-206ENST00000492692 UBE2HP62256 183 aa12.77□□□□□ -0.37
CSMD3-206ENST00000492692 ALDH1L2Q3SY69 923 aa12.77□□□□□ -0.37
CSMD3-206ENST00000492692 ARHGAP22Q7Z5H3 698 aa12.77□□□□□ -0.37
CSMD3-206ENST00000492692 TAX1BP1Q86VP1 789 aa12.77□□□□□ -0.37
CSMD3-206ENST00000492692 TEKT1Q969V4 418 aa12.77□□□□□ -0.37
CSMD3-206ENST00000492692 POLR3CQ9BUI4 534 aaPredicted RBP12.77□□□□□ -0.37
CSMD3-206ENST00000492692 BCL2L13Q9BXK5 485 aa12.77□□□□□ -0.37
CSMD3-206ENST00000492692 NSD3Q9BZ95 1437 aa12.76□□□□□ -0.37
CSMD3-206ENST00000492692 EBAG9O00559 213 aa12.76□□□□□ -0.37
CSMD3-206ENST00000492692 LIN7AO14910 233 aaPredicted RBP12.76□□□□□ -0.37
CSMD3-206ENST00000492692 SHOX2O60902 331 aaPredicted RBP12.76□□□□□ -0.37
CSMD3-206ENST00000492692 SASH1O94885 1247 aa12.76□□□□□ -0.37
CSMD3-206ENST00000492692 CHGAP10645 457 aaKnown RBP12.76□□□□□ -0.37
CSMD3-206ENST00000492692 CDR1P51861 262 aa12.76□□□□□ -0.37
CSMD3-206ENST00000492692 ROR2Q01974 943 aaKnown RBP12.76□□□□□ -0.37
CSMD3-206ENST00000492692 IFT88Q13099 833 aa12.76□□□□□ -0.37
CSMD3-206ENST00000492692 SNW1Q13573 536 aaKnown RBP12.76□□□□□ -0.37
CSMD3-206ENST00000492692 GET4Q7L5D6 327 aaPredicted RBP12.76□□□□□ -0.37
CSMD3-206ENST00000492692 ITPRIPQ8IWB1 547 aa12.76□□□□□ -0.37
CSMD3-206ENST00000492692 CCDC170Q8IYT3 715 aa12.76□□□□□ -0.37
CSMD3-206ENST00000492692 LMBR1Q8WVP7 490 aa12.76□□□□□ -0.37
CSMD3-206ENST00000492692 HOOK2Q96ED9 719 aa12.76□□□□□ -0.37
CSMD3-206ENST00000492692 TSGA10Q9BZW7 698 aa12.76□□□□□ -0.37
CSMD3-206ENST00000492692 DNAI1Q9UI46 699 aa12.76□□□□□ -0.37
CSMD3-206ENST00000492692 NRXN1Q9ULB1 1477 aa12.76□□□□□ -0.37
CSMD3-206ENST00000492692 TRAPPC8Q9Y2L5 1435 aa12.76□□□□□ -0.37
CSMD3-206ENST00000492692 SPDYE3A6NKU9 549 aa12.76□□□□□ -0.37
CSMD3-206ENST00000492692 GJA8P48165 433 aa12.76□□□□□ -0.37
CSMD3-206ENST00000492692 MCM2P49736 904 aa12.76□□□□□ -0.37
CSMD3-206ENST00000492692 ZBED6P86452 979 aa12.76□□□□□ -0.37
CSMD3-206ENST00000492692 LRRFIP1Q32MZ4 808 aaKnown RBP12.76□□□□□ -0.37
CSMD3-206ENST00000492692 RRP12Q5JTH9 1297 aaKnown RBP12.76□□□□□ -0.37
CSMD3-206ENST00000492692 INTS4Q96HW7 963 aaKnown RBP12.76□□□□□ -0.37
CSMD3-206ENST00000492692 ALS2CR12Q96Q35 445 aa12.76□□□□□ -0.37
CSMD3-206ENST00000492692 MMADHCQ9H3L0 296 aaPredicted RBP12.76□□□□□ -0.37
CSMD3-206ENST00000492692 UNC45AQ9H3U1 944 aa12.76□□□□□ -0.37
CSMD3-206ENST00000492692 CD248Q9HCU0 757 aa12.76□□□□□ -0.37
CSMD3-206ENST00000492692 TMOD4Q9NZQ9 345 aa12.76□□□□□ -0.37
CSMD3-206ENST00000492692 KIF1BO60333 1816 aa12.75□□□□□ -0.37
CSMD3-206ENST00000492692 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.75□□□□□ -0.37
CSMD3-206ENST00000492692 ERICH2A1L162 156 aa12.75□□□□□ -0.37
CSMD3-206ENST00000492692 USP27XA6NNY8 438 aa12.75□□□□□ -0.37
CSMD3-206ENST00000492692 ANKRD65E5RJM6 399 aa12.75□□□□□ -0.37
CSMD3-206ENST00000492692 ERLIN1O75477 346 aa12.75□□□□□ -0.37
CSMD3-206ENST00000492692 VCAM1P19320 739 aa12.75□□□□□ -0.37
CSMD3-206ENST00000492692 SMTNP53814 917 aa12.75□□□□□ -0.37
CSMD3-206ENST00000492692 SF3B2Q13435 895 aaKnown RBP12.75□□□□□ -0.37
CSMD3-206ENST00000492692 SLMAPQ14BN4 828 aa12.75□□□□□ -0.37
CSMD3-206ENST00000492692 LONRF2Q1L5Z9 754 aa12.75□□□□□ -0.37
CSMD3-206ENST00000492692 SLC30A9Q6PML9 568 aa12.75□□□□□ -0.37
CSMD3-206ENST00000492692 MICALCLQ6ZW33 695 aa12.75□□□□□ -0.37
CSMD3-206ENST00000492692 HDXQ7Z353 690 aa12.75□□□□□ -0.37
CSMD3-206ENST00000492692 USP48Q86UV5 1035 aa12.75□□□□□ -0.37
CSMD3-206ENST00000492692 CNNM3Q8NE01 707 aa12.75□□□□□ -0.37
CSMD3-206ENST00000492692 RABGGTAQ92696 567 aa12.75□□□□□ -0.37
CSMD3-206ENST00000492692 SPDL1Q96EA4 605 aa12.75□□□□□ -0.37
CSMD3-206ENST00000492692 RRP7AQ9Y3A4 280 aaKnown RBP12.75□□□□□ -0.37
CSMD3-206ENST00000492692 NPHP1O15259 732 aa12.74□□□□□ -0.37
CSMD3-206ENST00000492692 PPFIA3O75145 1194 aa12.74□□□□□ -0.37
CSMD3-206ENST00000492692 GADD45BO75293 160 aaPredicted RBP12.74□□□□□ -0.37
CSMD3-206ENST00000492692 CDC45O75419 566 aa12.74□□□□□ -0.37
CSMD3-206ENST00000492692 FERP16591 822 aa12.74□□□□□ -0.37
CSMD3-206ENST00000492692 NEUROD2Q15784 382 aa12.74□□□□□ -0.37
CSMD3-206ENST00000492692 SFMBT2Q5VUG0 894 aa12.74□□□□□ -0.37
CSMD3-206ENST00000492692 ARMC3Q5W041 872 aa12.74□□□□□ -0.37
CSMD3-206ENST00000492692 SARM1Q6SZW1 724 aa12.74□□□□□ -0.37
CSMD3-206ENST00000492692 APLFQ8IW19 511 aaPredicted RBP12.74□□□□□ -0.37
CSMD3-206ENST00000492692 DRC7Q8IY82 874 aa12.74□□□□□ -0.37
CSMD3-206ENST00000492692 ZGPATQ8N5A5 531 aaKnown RBP12.74□□□□□ -0.37
CSMD3-206ENST00000492692 CHMP7Q8WUX9 453 aaPredicted RBP12.74□□□□□ -0.37
CSMD3-206ENST00000492692 RPAP1Q9BWH6 1393 aaPredicted RBP12.74□□□□□ -0.37
CSMD3-206ENST00000492692 VWDEQ8N2E2 1590 aa12.74□□□□□ -0.37
CSMD3-206ENST00000492692 GOLGA6L10A6NI86 522 aa12.74□□□□□ -0.37
CSMD3-206ENST00000492692 RANBP1P43487 201 aa12.74□□□□□ -0.37
CSMD3-206ENST00000492692 FBLN2P98095 1184 aa12.74□□□□□ -0.37
CSMD3-206ENST00000492692 CUL4AQ13619 759 aa12.74□□□□□ -0.37
CSMD3-206ENST00000492692 NAA25Q14CX7 972 aa12.74□□□□□ -0.37
CSMD3-206ENST00000492692 PUS10Q3MIT2 529 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms