RNA–Protein interactions for RNA: ENST00000491936.5

TMEM50A-205, Transcript of transmembrane protein 50A, humanhuman

TSL 1 (best)

Gene TMEM50A, Length 965 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-205ENST00000491936 CWC22Q9HCG8 908 aaKnown RBP18.17■□□□□ 0.5
TMEM50A-205ENST00000491936 UBR3Q6ZT12 1888 aa18.16■□□□□ 0.5
TMEM50A-205ENST00000491936 FGFR2P21802 821 aa18.16■□□□□ 0.5
TMEM50A-205ENST00000491936 NEK4P51957 841 aa18.16■□□□□ 0.5
TMEM50A-205ENST00000491936 NECTIN1Q15223 517 aa18.16■□□□□ 0.5
TMEM50A-205ENST00000491936 ARHGEF1Q92888 912 aaKnown RBP18.16■□□□□ 0.5
TMEM50A-205ENST00000491936 SYT17Q9BSW7 474 aa18.16■□□□□ 0.5
TMEM50A-205ENST00000491936 HMG20BQ9P0W2 317 aa18.16■□□□□ 0.5
TMEM50A-205ENST00000491936 GTF2E1P29083 439 aaPredicted RBP18.15■□□□□ 0.5
TMEM50A-205ENST00000491936 RFC4P35249 363 aa18.15■□□□□ 0.5
TMEM50A-205ENST00000491936 TTF1Q15361 905 aaPredicted RBP18.15■□□□□ 0.5
TMEM50A-205ENST00000491936 TSGA10IPQ3SY00 556 aa18.15■□□□□ 0.5
TMEM50A-205ENST00000491936 TBC1D9BQ66K14 1250 aa18.15■□□□□ 0.5
TMEM50A-205ENST00000491936 FAM227BQ96M60 508 aa18.15■□□□□ 0.5
TMEM50A-205ENST00000491936 SLKQ9H2G2 1235 aaPredicted RBP18.15■□□□□ 0.5
TMEM50A-205ENST00000491936 PALD1Q9ULE6 856 aa18.15■□□□□ 0.5
TMEM50A-205ENST00000491936 SNX14Q9Y5W7 946 aa18.15■□□□□ 0.5
TMEM50A-205ENST00000491936 RNF113AO15541 343 aaKnown RBP18.14■□□□□ 0.49
TMEM50A-205ENST00000491936 CD2BP2O95400 341 aaKnown RBP18.14■□□□□ 0.49
TMEM50A-205ENST00000491936 SLC5A1P13866 664 aa18.14■□□□□ 0.49
TMEM50A-205ENST00000491936 ERFEQ4G0M1 354 aa18.14■□□□□ 0.49
TMEM50A-205ENST00000491936 ZSCAN25Q6NSZ9 544 aa18.14■□□□□ 0.49
TMEM50A-205ENST00000491936 AMIGO3Q86WK7 504 aa18.14■□□□□ 0.49
TMEM50A-205ENST00000491936 DDX60Q8IY21 1712 aaKnown RBP18.13■□□□□ 0.49
TMEM50A-205ENST00000491936 A0A0D9SFI3 127 aa18.13■□□□□ 0.49
TMEM50A-205ENST00000491936 FAM177BA6PVY3 158 aa18.13■□□□□ 0.49
TMEM50A-205ENST00000491936 GOLIM4O00461 696 aa18.13■□□□□ 0.49
TMEM50A-205ENST00000491936 TAF5LO75529 589 aa18.13■□□□□ 0.49
TMEM50A-205ENST00000491936 PSMA5P28066 241 aa18.13■□□□□ 0.49
TMEM50A-205ENST00000491936 NLRP3Q96P20 1036 aa18.13■□□□□ 0.49
TMEM50A-205ENST00000491936 ARID4AP29374 1257 aaPredicted RBP18.12■□□□□ 0.49
TMEM50A-205ENST00000491936 ADORA1P30542 326 aa18.12■□□□□ 0.49
TMEM50A-205ENST00000491936 PTH1RQ03431 593 aa18.12■□□□□ 0.49
TMEM50A-205ENST00000491936 KRT32Q14532 448 aa18.12■□□□□ 0.49
TMEM50A-205ENST00000491936 NFKBIBQ15653 356 aa18.12■□□□□ 0.49
TMEM50A-205ENST00000491936 ZMYM1Q5SVZ6 1142 aa18.12■□□□□ 0.49
TMEM50A-205ENST00000491936 DDX46Q7L014 1031 aaKnown RBP18.12■□□□□ 0.49
TMEM50A-205ENST00000491936 NBPF5PQ86XG9 351 aaPredicted RBP18.12■□□□□ 0.49
TMEM50A-205ENST00000491936 ANKRD18AQ8IVF6 992 aa18.12■□□□□ 0.49
TMEM50A-205ENST00000491936 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.12■□□□□ 0.49
TMEM50A-205ENST00000491936 BSDC1Q9NW68 430 aaPredicted RBP18.12■□□□□ 0.49
TMEM50A-205ENST00000491936 RBM8AQ9Y5S9 174 aaKnown RBP18.12■□□□□ 0.49
TMEM50A-205ENST00000491936 KCNJ4P48050 445 aa18.11■□□□□ 0.49
TMEM50A-205ENST00000491936 EDC3Q96F86 508 aaKnown RBP18.11■□□□□ 0.49
TMEM50A-205ENST00000491936 INTS4Q96HW7 963 aaKnown RBP18.11■□□□□ 0.49
TMEM50A-205ENST00000491936 DSCC1Q9BVC3 393 aa18.11■□□□□ 0.49
TMEM50A-205ENST00000491936 CARMIL3Q8ND23 1372 aa18.1■□□□□ 0.49
TMEM50A-205ENST00000491936 ZBTB22O15209 634 aa18.1■□□□□ 0.49
TMEM50A-205ENST00000491936 POLD1P28340 1107 aa18.1■□□□□ 0.49
TMEM50A-205ENST00000491936 FKBP4Q02790 459 aaKnown RBP eCLIP18.1■□□□□ 0.49
TMEM50A-205ENST00000491936 CREB3L3Q68CJ9 461 aa18.1■□□□□ 0.49
TMEM50A-205ENST00000491936 SMIM5Q71RC9 77 aa18.1■□□□□ 0.49
TMEM50A-205ENST00000491936 ALDH8A1Q9H2A2 487 aaPredicted RBP18.1■□□□□ 0.49
TMEM50A-205ENST00000491936 ZSWIM6Q9HCJ5 1215 aa18.1■□□□□ 0.49
TMEM50A-205ENST00000491936 SEC31BQ9NQW1 1179 aa18.1■□□□□ 0.49
TMEM50A-205ENST00000491936 SRP68Q9UHB9 627 aaKnown RBP18.1■□□□□ 0.49
TMEM50A-205ENST00000491936 CUL4AQ13619 759 aa18.09■□□□□ 0.49
TMEM50A-205ENST00000491936 VPS53Q5VIR6 699 aa18.09■□□□□ 0.49
TMEM50A-205ENST00000491936 CCDC102BQ68D86 513 aa18.09■□□□□ 0.49
TMEM50A-205ENST00000491936 PRPF40BQ6NWY9 871 aaKnown RBP18.09■□□□□ 0.49
TMEM50A-205ENST00000491936 FLAD1Q8NFF5 587 aa18.09■□□□□ 0.49
TMEM50A-205ENST00000491936 SLC27A2O14975 620 aa18.08■□□□□ 0.48
TMEM50A-205ENST00000491936 NUCB2P80303 420 aa18.08■□□□□ 0.48
TMEM50A-205ENST00000491936 UBE4AQ14139 1066 aa18.08■□□□□ 0.48
TMEM50A-205ENST00000491936 MSL1Q68DK7 614 aa18.08■□□□□ 0.48
TMEM50A-205ENST00000491936 BICDL1Q6ZP65 573 aa18.08■□□□□ 0.48
TMEM50A-205ENST00000491936 RASEFQ8IZ41 740 aa18.08■□□□□ 0.48
TMEM50A-205ENST00000491936 TTC14Q96N46 770 aa18.08■□□□□ 0.48
TMEM50A-205ENST00000491936 CYP46A1Q9Y6A2 500 aa18.08■□□□□ 0.48
TMEM50A-205ENST00000491936 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.07■□□□□ 0.48
TMEM50A-205ENST00000491936 NBR1Q14596 966 aa18.07■□□□□ 0.48
TMEM50A-205ENST00000491936 CHRDL2Q6WN34 429 aa18.07■□□□□ 0.48
TMEM50A-205ENST00000491936 ZNF589Q86UQ0 364 aaPredicted RBP18.07■□□□□ 0.48
TMEM50A-205ENST00000491936 SPRYD3Q8NCJ5 442 aa18.07■□□□□ 0.48
TMEM50A-205ENST00000491936 APPBP2Q92624 585 aa18.07■□□□□ 0.48
TMEM50A-205ENST00000491936 TMX3Q96JJ7 454 aa18.07■□□□□ 0.48
TMEM50A-205ENST00000491936 ZSCAN31Q96LW9 406 aaPredicted RBP18.07■□□□□ 0.48
TMEM50A-205ENST00000491936 ANKRD2Q9GZV1 360 aa18.07■□□□□ 0.48
TMEM50A-205ENST00000491936 ZAP70P43403 619 aa18.06■□□□□ 0.48
TMEM50A-205ENST00000491936 RPS8P62241 208 aaKnown RBP18.06■□□□□ 0.48
TMEM50A-205ENST00000491936 CHRNDQ07001 517 aa18.06■□□□□ 0.48
TMEM50A-205ENST00000491936 ANKRD1Q15327 319 aa18.06■□□□□ 0.48
TMEM50A-205ENST00000491936 UBE3CQ15386 1083 aa18.06■□□□□ 0.48
TMEM50A-205ENST00000491936 RUFY3Q7L099 469 aa18.06■□□□□ 0.48
TMEM50A-205ENST00000491936 CTNNA3Q9UI47 895 aa18.06■□□□□ 0.48
TMEM50A-205ENST00000491936 LIMCH1Q9UPQ0 1083 aa18.06■□□□□ 0.48
TMEM50A-205ENST00000491936 ARAP2Q8WZ64 1704 aa18.06■□□□□ 0.48
TMEM50A-205ENST00000491936 IGSF3O75054 1194 aa18.05■□□□□ 0.48
TMEM50A-205ENST00000491936 PHF14O94880 888 aa18.05■□□□□ 0.48
TMEM50A-205ENST00000491936 HMGB1P09429 215 aaKnown RBP18.05■□□□□ 0.48
TMEM50A-205ENST00000491936 PTMSP20962 102 aa18.05■□□□□ 0.48
TMEM50A-205ENST00000491936 MCAMP43121 646 aa18.05■□□□□ 0.48
TMEM50A-205ENST00000491936 RAB3GAP1Q15042 981 aa18.05■□□□□ 0.48
TMEM50A-205ENST00000491936 PDRG1Q9NUG6 133 aa18.05■□□□□ 0.48
TMEM50A-205ENST00000491936 GNL3LQ9NVN8 582 aaKnown RBP18.05■□□□□ 0.48
TMEM50A-205ENST00000491936 NDUFB9Q9Y6M9 179 aa18.05■□□□□ 0.48
TMEM50A-205ENST00000491936 RPAP1Q9BWH6 1393 aaPredicted RBP18.04■□□□□ 0.48
TMEM50A-205ENST00000491936 CASTP20810 708 aaKnown RBP18.04■□□□□ 0.48
TMEM50A-205ENST00000491936 SCARF1Q14162 830 aa18.04■□□□□ 0.48
TMEM50A-205ENST00000491936 NFIXQ14938 502 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms