RNA–Protein interactions for RNA: ENST00000491299.5

CMSS1-206, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-206ENST00000491299 COPS6Q7L5N1 327 aa11.06□□□□□ -0.64
CMSS1-206ENST00000491299 NKX2-3Q8TAU0 364 aa11.06□□□□□ -0.64
CMSS1-206ENST00000491299 XAGE3Q8WTP9 111 aa11.06□□□□□ -0.64
CMSS1-206ENST00000491299 RNF181Q9P0P0 153 aa11.06□□□□□ -0.64
CMSS1-206ENST00000491299 CHPF2Q9P2E5 772 aa11.06□□□□□ -0.64
CMSS1-206ENST00000491299 SENP3-EIF4A1A0A087X0R7 540 aa11.05□□□□□ -0.64
CMSS1-206ENST00000491299 TLL1O43897 1013 aa11.05□□□□□ -0.64
CMSS1-206ENST00000491299 ZMYND10O75800 440 aa11.05□□□□□ -0.64
CMSS1-206ENST00000491299 ZNF853P0CG23 659 aa11.05□□□□□ -0.64
CMSS1-206ENST00000491299 CCDC27Q2M243 656 aa11.05□□□□□ -0.64
CMSS1-206ENST00000491299 PROSER3Q2NL68 480 aa11.05□□□□□ -0.64
CMSS1-206ENST00000491299 RPGRQ92834 1020 aaKnown RBP11.05□□□□□ -0.64
CMSS1-206ENST00000491299 YTHDC1Q96MU7 727 aaKnown RBP11.05□□□□□ -0.64
CMSS1-206ENST00000491299 HYPKQ9NX55 129 aa11.05□□□□□ -0.64
CMSS1-206ENST00000491299 SLX4Q8IY92 1834 aa11.05□□□□□ -0.64
CMSS1-206ENST00000491299 TIAM2Q8IVF5 1701 aa11.04□□□□□ -0.64
CMSS1-206ENST00000491299 C21orf2O43822 256 aa11.04□□□□□ -0.64
CMSS1-206ENST00000491299 LMNB1P20700 586 aa11.04□□□□□ -0.64
CMSS1-206ENST00000491299 ALDH1B1P30837 517 aa11.04□□□□□ -0.64
CMSS1-206ENST00000491299 RASSF7Q02833 373 aa11.04□□□□□ -0.64
CMSS1-206ENST00000491299 PUS10Q3MIT2 529 aaKnown RBP11.04□□□□□ -0.64
CMSS1-206ENST00000491299 PRPF40BQ6NWY9 871 aaKnown RBP11.04□□□□□ -0.64
CMSS1-206ENST00000491299 NUTM1Q86Y26 1132 aa11.04□□□□□ -0.64
CMSS1-206ENST00000491299 ZNF34Q8IZ26 560 aa11.04□□□□□ -0.64
CMSS1-206ENST00000491299 UTP14AQ9BVJ6 771 aaKnown RBP11.04□□□□□ -0.64
CMSS1-206ENST00000491299 RNF123Q5XPI4 1314 aa11.04□□□□□ -0.64
CMSS1-206ENST00000491299 UBN2Q6ZU65 1347 aa11.04□□□□□ -0.64
CMSS1-206ENST00000491299 KDM2BQ8NHM5 1336 aa11.04□□□□□ -0.64
CMSS1-206ENST00000491299 ZC3H4Q9UPT8 1303 aaKnown RBP11.04□□□□□ -0.64
CMSS1-206ENST00000491299 FER1L6Q2WGJ9 1857 aa11.04□□□□□ -0.64
CMSS1-206ENST00000491299 RIC1Q4ADV7 1423 aa11.03□□□□□ -0.64
CMSS1-206ENST00000491299 ELL2O00472 640 aaPredicted RBP11.03□□□□□ -0.64
CMSS1-206ENST00000491299 C1QTNF8P60827 252 aa11.03□□□□□ -0.64
CMSS1-206ENST00000491299 ERFEQ4G0M1 354 aa11.03□□□□□ -0.64
CMSS1-206ENST00000491299 CCDC30Q5VVM6 783 aa11.03□□□□□ -0.64
CMSS1-206ENST00000491299 SUSD4Q5VX71 490 aa11.03□□□□□ -0.64
CMSS1-206ENST00000491299 LRP10Q7Z4F1 713 aa11.03□□□□□ -0.64
CMSS1-206ENST00000491299 WWC1Q8IX03 1113 aa11.03□□□□□ -0.64
CMSS1-206ENST00000491299 TMX4Q9H1E5 349 aaPredicted RBP11.03□□□□□ -0.64
CMSS1-206ENST00000491299 TAOK3Q9H2K8 898 aa11.03□□□□□ -0.64
CMSS1-206ENST00000491299 TNRC6CQ9HCJ0 1690 aaKnown RBP11.03□□□□□ -0.64
CMSS1-206ENST00000491299 DICER1Q9UPY3 1922 aaKnown RBP11.03□□□□□ -0.64
CMSS1-206ENST00000491299 ABCC12Q96J65 1359 aa11.03□□□□□ -0.64
CMSS1-206ENST00000491299 KLRG2A4D1S0 409 aaPredicted RBP11.02□□□□□ -0.65
CMSS1-206ENST00000491299 TCIRG1Q13488 830 aa11.02□□□□□ -0.65
CMSS1-206ENST00000491299 CCDC93Q567U6 631 aa11.02□□□□□ -0.65
CMSS1-206ENST00000491299 PLBD2Q8NHP8 589 aa11.02□□□□□ -0.65
CMSS1-206ENST00000491299 NLRP3Q96P20 1036 aa11.02□□□□□ -0.65
CMSS1-206ENST00000491299 STK31Q9BXU1 1019 aa11.02□□□□□ -0.65
CMSS1-206ENST00000491299 SALL2Q9Y467 1007 aaPredicted RBP11.02□□□□□ -0.65
CMSS1-206ENST00000491299 IL16Q14005 1332 aa11.02□□□□□ -0.65
CMSS1-206ENST00000491299 RGS20O76081 388 aa11.01□□□□□ -0.65
CMSS1-206ENST00000491299 NTSR2O95665 410 aa11.01□□□□□ -0.65
CMSS1-206ENST00000491299 DDX58O95786 925 aaKnown RBP11.01□□□□□ -0.65
CMSS1-206ENST00000491299 FUT2Q10981 343 aa11.01□□□□□ -0.65
CMSS1-206ENST00000491299 PPP1R18Q6NYC8 613 aa11.01□□□□□ -0.65
CMSS1-206ENST00000491299 RIC3Q7Z5B4 369 aa11.01□□□□□ -0.65
CMSS1-206ENST00000491299 C16orf71Q8IYS4 520 aaPredicted RBP11.01□□□□□ -0.65
CMSS1-206ENST00000491299 TSR2Q969E8 191 aaKnown RBP11.01□□□□□ -0.65
CMSS1-206ENST00000491299 RBM17Q96I25 401 aaKnown RBP11.01□□□□□ -0.65
CMSS1-206ENST00000491299 TRMT112Q9UI30 125 aaKnown RBP11.01□□□□□ -0.65
CMSS1-206ENST00000491299 CACNA1FO60840 1977 aa11□□□□□ -0.65
CMSS1-206ENST00000491299 NFKBIEO00221 500 aa11□□□□□ -0.65
CMSS1-206ENST00000491299 NR1I2O75469 434 aa11□□□□□ -0.65
CMSS1-206ENST00000491299 GCGRP47871 477 aa11□□□□□ -0.65
CMSS1-206ENST00000491299 CRY2Q49AN0 593 aa11□□□□□ -0.65
CMSS1-206ENST00000491299 NLRP10Q86W26 655 aa11□□□□□ -0.65
CMSS1-206ENST00000491299 WDR63Q8IWG1 891 aa11□□□□□ -0.65
CMSS1-206ENST00000491299 RTKN2Q8IZC4 609 aa11□□□□□ -0.65
CMSS1-206ENST00000491299 GPCPD1Q9NPB8 672 aa11□□□□□ -0.65
CMSS1-206ENST00000491299 SH3TC1Q8TE82 1336 aa11□□□□□ -0.65
CMSS1-206ENST00000491299 LTBP3Q9NS15 1303 aa11□□□□□ -0.65
CMSS1-206ENST00000491299 LAMB2P55268 1798 aa10.99□□□□□ -0.65
CMSS1-206ENST00000491299 CLCN1P35523 988 aa10.99□□□□□ -0.65
CMSS1-206ENST00000491299 TWISTNBQ3B726 338 aaPredicted RBP10.99□□□□□ -0.65
CMSS1-206ENST00000491299 CC2D2BQ6DHV5 1058 aa10.99□□□□□ -0.65
CMSS1-206ENST00000491299 C8orf58Q8NAV2 365 aa10.99□□□□□ -0.65
CMSS1-206ENST00000491299 HSP90B1P14625 803 aaKnown RBP10.98□□□□□ -0.65
CMSS1-206ENST00000491299 CD46P15529 392 aa10.98□□□□□ -0.65
CMSS1-206ENST00000491299 HNRNPUQ00839 825 aaKnown RBP eCLIP10.98□□□□□ -0.65
CMSS1-206ENST00000491299 FKBP4Q02790 459 aaKnown RBP eCLIP10.98□□□□□ -0.65
CMSS1-206ENST00000491299 GRIPAP1Q4V328 841 aa10.98□□□□□ -0.65
CMSS1-206ENST00000491299 MYH16Q9H6N6 1097 aa10.98□□□□□ -0.65
CMSS1-206ENST00000491299 CEP350Q5VT06 3117 aa10.97□□□□□ -0.65
CMSS1-206ENST00000491299 GLTPD2A6NH11 291 aa10.97□□□□□ -0.65
CMSS1-206ENST00000491299 ATP5J2-PTCD1G3V325 749 aa10.97□□□□□ -0.65
CMSS1-206ENST00000491299 PPEF1O14829 653 aaPredicted RBP10.97□□□□□ -0.65
CMSS1-206ENST00000491299 HOXA10P31260 410 aaPredicted RBP10.97□□□□□ -0.65
CMSS1-206ENST00000491299 TTLL12Q14166 644 aaPredicted RBP10.97□□□□□ -0.65
CMSS1-206ENST00000491299 SLC10A5Q5PT55 438 aa10.97□□□□□ -0.65
CMSS1-206ENST00000491299 DDX46Q7L014 1031 aaKnown RBP10.97□□□□□ -0.65
CMSS1-206ENST00000491299 TSPYL6Q8N831 410 aa10.97□□□□□ -0.65
CMSS1-206ENST00000491299 CRAMP1Q96RY5 1269 aa10.97□□□□□ -0.65
CMSS1-206ENST00000491299 PHAXQ9H814 394 aaKnown RBP10.97□□□□□ -0.65
CMSS1-206ENST00000491299 NMRK2Q9NPI5 230 aa10.97□□□□□ -0.65
CMSS1-206ENST00000491299 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.97□□□□□ -0.65
CMSS1-206ENST00000491299 FANCIQ9NVI1 1328 aa10.97□□□□□ -0.65
CMSS1-206ENST00000491299 DDX60Q8IY21 1712 aaKnown RBP10.96□□□□□ -0.65
CMSS1-206ENST00000491299 TOMM70O94826 608 aa10.96□□□□□ -0.65
CMSS1-206ENST00000491299 HCLS1P14317 486 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms